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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 12 of 12

  1. Epigenetic Reprogramming in Host-Parasite Coevolution: The Toxoplasma Paradigm

    • Annual Review of Microbiology
    • Like many intracellular pathogens, the protozoan parasite Toxoplasma gondii has evolved sophisticated mechanisms to promote its transmission and persistence in a variety of hosts by injecting effector proteins that manipulate many processes in the cells it invades. Specifically, the parasite diverts host epigenetic modulators and modifiers from their native functions to rewire host gene expression to counteract the innate immune response and to limit its strength.

      • Parasites
      • Toxoplasma gondii
  2. The Type VII Secretion System of Staphylococcus

    • Annual Review of Microbiology
    • The type VII protein secretion system (T7SS) of Staphylococcus aureus is encoded at the ess locus. T7 substrate recognition and protein transport are mediated by EssC, a membrane-bound multidomain ATPase. Four EssC sequence variants have been identified across S. aureus strains, each accompanied by a specific suite of substrate proteins. The ess genes are upregulated during persistent infection, and the secretion system contributes to virulence in disease models.

      • Bacterial pathogens
      • Staphylococcus aureus
  3. Antimicrobial Activity of Metals and Metalloids

    • Annual Review of Microbiology
    • Competition shapes evolution. Toxic metals and metalloids have exerted selective pressure on life since the rise of the first organisms on the Earth, which has led to the evolution and acquisition of resistance mechanisms against them, as well as mechanisms to weaponize them. Microorganisms exploit antimicrobial metals and metalloids to gain competitive advantage over other members of microbial communities. This exerts a strong selective pressure that drives evolution of resistance.

      • Chemical contaminants
      • Heavy Metals
  4. Cell Wall Biology of Vibrio cholerae

    • Annual Review of Microbiology
    • Most bacteria are protected from environmental offenses by a cell wall consisting of strong yet elastic peptidoglycan. The cell wall is essential for preserving bacterial morphology and viability, and thus the enzymes involved in the production and turnover of peptidoglycan have become preferred targets for many of our most successful antibiotics.

      • Bacterial pathogens
      • Vibrio
  5. Similarities and Dissimilarities of COVID-19 and Other Coronavirus Diseases

    • Annual Review of Microbiology
    • In less than two decades, three deadly zoonotic coronaviruses, severe acute respiratory syndrome coronavirus (SARS-CoV), Middle East respiratory syndrome coronavirus (MERS-CoV), and SARS-CoV-2, have emerged in humans, causing SARS, MERS, and coronavirus disease 2019 (COVID-19), respectively. The current COVID-19 pandemic poses an unprecedented crisis in health care and social and economic development.

      • Viruses
      • COVID-19
  6. Cell Wall Biology of Vibrio cholerae

    • Annual Review of Microbiology
    • Most bacteria are protected from environmental offenses by a cell wall consisting of strong yet elastic peptidoglycan. The cell wall is essential for preserving bacterial morphology and viability, and thus the enzymes involved in the production and turnover of peptidoglycan have become preferred targets for many of our most successful antibiotics.

      • Vibrio
      • Bacterial pathogens
  7. Plasmodium vivax Latent Liver Stage Infection and Relapse: Biological Insights and New Experimental Tools

    • Annual Review of Microbiology
    • Plasmodium vivax is the most widespread human malaria parasite, in part because it can form latent liver stages known as hypnozoites after transmission by female anopheline mosquitoes to human hosts. These persistent stages can activate weeks, months, or even years after the primary clinical infection; replicate; and initiate relapses of blood stage infection, which causes disease and recurring transmission.

  8. How Food Affects Colonization Resistance Against Enteropathogenic Bacteria

    • Annual Review of Microbiology
    • Food has a major impact on all aspects of health. Recent data suggest that food composition can also affect susceptibility to infections by enteropathogenic bacteria. Here, we discuss how food may alter the microbiota as well as mucosal defenses and how this can affect infection. Salmonella Typhimurium diarrhea serves as a paradigm, and complementary evidence comes from other pathogens.

      • Bacterial pathogens
      • Salmonella
  9. Bacterial Quorum Sensing During Infection

    • Annual Review of Microbiology
    • Bacteria are highly interactive and possess an extraordinary repertoire of intercellular communication and social behaviors, including quorum sensing (QS). QS has been studied in detail at the molecular level, so mechanistic details are well understood in many species and are often involved in virulence. The use of different animal host models has demonstrated QS-dependent control of virulence determinants and virulence in several human pathogenic bacteria.

  10. Fungal Volatile Organic Compounds: More Than Just a Funky Smell?

    • Annual Review of Microbiology
    • Many volatile organic compounds (VOCs) associated with industry cause adverse health effects, but less is known about the physiological effects of biologically produced volatiles. This review focuses on the VOCs emitted by fungi, which often have characteristic moldy or “mushroomy” odors. One of the most common fungal VOCs, 1-octen-3-ol, is a semiochemical for many arthropod species and also serves as a developmental hormone for several fungal groups.

  11. Human Coronavirus: Host-Pathogen Interaction

    • Annual Review of Microbiology
    • Human coronavirus (HCoV) infection causes respiratory diseases with mild to severe outcomes. In the last 15 years, we have witnessed the emergence of two zoonotic, highly pathogenic HCoVs: severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV). Replication of HCoV is regulated by a diversity of host factors and induces drastic alterations in cellular structure and physiology.

      • Viruses
      • COVID-19
  12. Bent Bacteria: A Comparison of Cell Shape Mechanisms in Proteobacteria

    • Annual Review of Microbiology
    • Helical cell shape appears throughout the bacterial phylogenetic tree. Recent exciting work characterizing cell shape mutants in a number of curved and helical Proteobacteria is beginning to suggest possible mechanisms and provide tools to assess functional significance.

      • Bacterial pathogens
      • Campylobacter
      • Vibrio