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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 227

  1. Isolation and characterization of a relatively broad-spectrum phage against Escherichia coli

    • Archives of Microbiology
    • Multiple pathogenic types or serotypes restrict treatment for colibacillosis. In addition, rising antibiotic resistance has heightened public awareness to prevent and control pathogenic Escherichia coli. The bacteriophage is a viable technique to treat colibacillosis as an alternative to antibiotics.

      • Bacterial pathogens
      • Escherichia coli O157:H7
  2. Diversity, distribution, and bioprospecting potentials of carotenogenic yeast from mangrove ecosystem

    • Archives of Microbiology
    • Microbial production of carotenoids has gained significant interest for its cost-effectiveness and sustainable nature. This study focuses on 47 red-pigmented yeasts isolated from sediments and plant parts of 13 species of mangrove trees. The relative abundance and distribution of these yeasts varied with plant species and plant parts. The highest number of red yeasts was associated with the mangrove plant Avicennia officinalis (32%).

      • Bacterial pathogens
      • Vibrio
  3. Identification and characterization of Achromobacter spanius P-9 and elucidation of its deoxynivalenol-degrading potential

    • Archives of Microbiology
    • Deoxynivalenol (DON) poses significant challenges due to its frequent contamination of grains and associated products. Microbial strategies for mitigating DON toxicity showed application potential. Eight bacterial isolates with DON degradation activity over 5% were obtained from various samples of organic fertilizer in this study. One of the isolates emerged as a standout, demonstrating a substantial degradation capability, achieving a 99.21% reduction in DON levels.

      • Natural toxins
      • Mycotoxins
  4. Assessment of the in-vitro probiotic efficacy and safety of Pediococcus pentosaceus L1 and Streptococcus thermophilus L3 isolated from Laban, a popular fermented milk product

    • Archives of Microbiology
    • Probiotics are beneficial microorganisms, mostly lactic acid bacteria (LAB), that offer health benefits to the host when consumed in adequate amounts. This study assessed the probiotic efficacy and safety of LAB strains isolated from Laban, a traditional fermented milk product.

      • Bacterial pathogens
      • Bacillus cereus
      • Salmonella
      • Staphylococcus aureus
      • Vibrio
  5. Impact of lactic acid bacteria strains against Listeria monocytogenes biofilms on various food-contact surfaces

    • Archives of Microbiology
    • Listeria monocytogenes is one of the most important foodborne pathogens, causing listeriosis, a disease characterized by high mortality rates. This microorganism, commonly found in food production environments and transmitted to humans by consuming contaminated food, has the ability to form biofilms by attaching to a wide variety of surfaces. Traditional hygiene and sanitation procedures are not effective enough to completely remove L.

      • Bacterial pathogens
      • Listeria monocytogenes
  6. Isolation and characterization of lactic acid bacteria producing a potent anti-listerial bacteriocin-like inhibitory substance (BLIS) from chhurpi, a fermented milk product

    • Archives of Microbiology
    • Nowadays, the bacteriocin industries have seen significant growth, supplanting chemical preservatives in its ability to improve the shelf-life and safety of food. The increasing customer desire to use natural preservatives has fueled advancing bacteriocin research. The objective of this study was to identify lactic acid bacteria (LAB) that produce bacteriocin-like inhibitory substance (BLIS) and have strong anti-listerial activity.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Staphylococcus aureus
  7. Human milk oligosaccharides and the association with microbiota in colostrum: a pilot study

    • Archives of Microbiology
    • HMOs (Human milk oligosaccharide) has an impact on maternal and infant health. Colostrum samples of 70 breastfeeding women in China were collected and recorded clinical characteristics. The major oligosaccharides and microbiota were quantitated in colostrum. The concentration of fucosylated HMOs in primipara was higher than that of multipara (p = 0.030). The concentration of N-acetylated HMOs in vaginal delivery milk was less than that of cesarean (p = 0.038).

      • Bacterial pathogens
      • Staphylococcus aureus
  8. A robust CRISPR interference gene repression system in Vibrio parahaemolyticus

    • Archives of Microbiology
    • Vibrio parahaemolyticus is a significant cause of seafood-associated gastroenteritis and pestilence in aquaculture worldwide. Despite extensive research, strategies for protein depletion in this pathogen remain limited. Herein, we constructed a new CRISPR interference (CRISPRi) system for gene repression based on the combination of a shuttle vector pVv3 and the nuclease-null Cas9 variant (dead Cas9, or dCas9) from Streptococcus pyrogens.

      • Bacterial pathogens
      • Vibrio
  9. Unveiling bacterial consortium for xenobiotic biodegradation from Pichavaram mangrove forest soil: a metagenomic approach

    • Archives of Microbiology
    • Pichavaram mangrove forest was established as a wetland of International Importance by Article 2.1 in April 2022 by the Ministry of Environment, Forest and Climate Change, India. Even though it is a conserved site, xenobiotic agrochemical leaching on the forest land during monsoon is inevitable. These threaten the microbial diversity in the environment. Xenobiotic degradation is achieved using bacterial consortia already acclimatised to this environment.

      • Bacterial pathogens
      • Vibrio
  10. Dynamics of efflux pumps in antimicrobial resistance, persistence, and community living of Vibrionaceae

    • Archives of Microbiology
    • The marine bacteria of the Vibrionaceae family are significant from the point of view of their role in the marine geochemical cycle, as well as symbionts and opportunistic pathogens of aquatic animals and humans. The well-known pathogens of this group, Vibrio cholerae, V. parahaemolyticus, and V.

      • Bacterial pathogens
      • Vibrio
  11. The phase variation between wrinkly and smooth colony phenotype affects the virulence of Vibrio parahaemolyticus

    • Archives of Microbiology
    • Vibrio parahaemolyticus, the causative agent of seafood-associated gastroenteritis, undergoes wrinkly and smooth colony switching on the plate. The wrinkly spreader grew faster, had stronger motility and biofilm capacity when compared with the smooth one. However, whether the two phenotypes differ in their virulence still needs to be further investigated.

      • Bacterial pathogens
      • Vibrio
  12. Analysis of random mutations in Salmonella Gallinarum dihydropteroate synthase conferring sulfonamide resistance

    • Archives of Microbiology
    • In bacteria and primitive eukaryotes, sulfonamide antibiotics block the folate pathway by inhibiting dihydropteroate synthase (FolP) that combines para-aminobenzoic acid (pABA) and dihydropterin pyrophosphate (DHPP) to form dihydropteroic acid (DHP), a precursor for tetrahydrofolate synthesis. However, the emergence of resistant strains has severely compromised the use of pABA mimetics as sulfonamide drugs.

      • Bacterial pathogens
      • Salmonella
  13. Assessment of Lactobacillus rhamnosus mediated protection against arsenic-induced toxicity in zebrafish: a qPCR-based analysis of Firmicutes and Bacteroidetes groups and embryonic development

    • Archives of Microbiology
    • Arsenic poses a significant health risk worldwide, impacting the gut microbiota, reproductive health, and development. To address this issue, a cost-effective method like probiotic supplementation could be beneficial. However, the interplay between arsenic toxicity, probiotics, gut microbiota, and maternal transcript modulation remains unexplored. This study investigates the impact of Lactobacillus rhamnosus (L.

      • Chemical contaminants
      • Heavy Metals
  14. Characterization of pumilacidin, a lipopeptide biosurfactant produced from Bacillus pumilus NITDID1 and its prospect in bioremediation of hazardous pollutants

    • Archives of Microbiology
    • Highly hydrophobic compounds like petroleum and their byproducts, once released into the environment, can persist indefinitely by virtue of their ability to resist microbial degradation, ultimately paving the path to severe environmental pollution. Likewise, the accumulation of toxic heavy metals like lead, cadmium, chromium, etc., in the surroundings poses an alarming threat to various living organisms.

      • Chemical contaminants
      • Heavy Metals
  15. ESBL-producing Vibrio vulnificus and V. alginolyticus harbour a plasmid encoding ISEc9 upstream of blaCTX-M-55 and qnrS2 isolated from imported seafood

    • Archives of Microbiology
    • In recent years, trade liberalisation has led to the spread of antibiotic-resistant bacteria (ARB) in food products. Because ARB has reportedly been found in imported foods, the spread of plasmid-mediated ARB through food products is a concern. Here, we report the complete genome sequences of ESBL-producing Vibrio vulnificus and V. alginolyticus strains harbouring a plasmid isolated from imported seafood. First, V. vulnificus and V.

      • Bacterial pathogens
      • Vibrio
  16. Bioprospecting acid- and arsenic-tolerant plant growth-promoting rhizobacteria for mitigation of arsenic toxicity in acidic agricultural soils

    • Archives of Microbiology
    • Widespread use of chemical fertilizers and falling productivity in traditional agricultural practices has led to the biodiversity hotspot of North-Eastern region of India to face imminent threat to soil nutrients and biodiversity. The present work aimed to isolate rhizobacteria from Oryza sativa L.

      • Chemical contaminants
      • Heavy Metals
  17. Synergistic antimicrobial effect of nisin−octanoic acid nanoemulsions against E. coli and S. aureus

    • Archives of Microbiology
    • Food safety is a major public health concern all over the world. Therefore, the prevention of food contamination is becoming extremely crucial. In this study, an antimicrobial nanoemulsion composed of water-soluble nisin and fat-soluble octanoic acid was successfully prepared. The results showed that the average particle size and the polymer dispersity index of the nisin−octanoic acid (NOA) nanoemulsion were around 52.21 nm and 0.253, respectively.

      • Bacterial pathogens
      • Staphylococcus aureus
  18. Isolation of lectin from Musa acuminata for its antibiofilm potential against Methicillin-resistant Staphylococcus aureus and its synergistic effect with Enterococcus species

    • Archives of Microbiology
    • Methicillin resistant Staphylococcus aureus (MRSA) is an emerging pathogen posing a considerable burden on the healthcare system due to its involvement in skin and soft tissue infections (SSTIs). Lectins are carbohydrate binding proteins found ubiquitously in animals, plants and microorganisms. Extraction and isolation of proteins from Musa acuminata were performed by using Affinity chromatography with Sephadex G 75 to determine antibiofilm activity against MRSA.

      • Bacterial pathogens
      • Staphylococcus aureus
  19. Antibiotic resistance profiles on pathogenic bacteria in the Brazilian environments

    • Archives of Microbiology
    • The present study aimed to elaborate a review of multidrug-resistant (MDR) bacteria in soil, food, aquatic environments, cattle, poultry, and swine farms in Brazil. Initially, the literature database for published papers from 2012 to 2023 was Scientific Electronic Library Online (SciELO), U.S. National Library of Medicine (PubMed), and Google Scholar, through the descriptors: antimicrobial resistance, resistance profile, multidrug resistance, environmental bacteria, and pathogenic bacteria.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
      • Shigella
      • Staphylococcus aureus
      • Vibrio
  20. Farm to table: colistin resistance hitchhiking through food

    • Archives of Microbiology
    • Colistin is a high priority, last-resort antibiotic recklessly used in livestock and poultry farms. It is used as an antibiotic for treating multi-drug resistant Gram-negative bacterial infections as well as a growth promoter in poultry and animal farms. The sub-therapeutic doses of colistin exert a selection pressure on bacteria leading to the emergence of colistin resistance in the environment.

      • Chemical contaminants
      • Antibiotic residues
  21. Carotenoid from marine Bacillus infantis: production, extraction, partial characterization, and its biological activity

    • Archives of Microbiology
    • Marine bacteria could serve as a potential source of natural carotenoids. Bacillus infantis, (Accession number OP601610), a bacterium with the ability to synthesize carotenoids, was isolated from the marine environment and used in this investigation to produce an orange pigment. Additionally, the production, extraction, partial characterization, and biological activity of orange pigment are reported in the current work.

      • Bacterial pathogens
      • Salmonella
      • Shigella
      • Staphylococcus aureus
  22. In-vitro evaluation of the probiotic potential and the fermentation profile of Pediococcus and Enterococcus strains isolated from Moroccan camel milk

    • Archives of Microbiology
    • The promotion of human health through natural approaches like functional foods and probiotics is in high demand. The medicinal plants are the major feed of Moroccan dromedary, which improves the functional properties of their milk. A few studies have reported the probiotic and functional aptitudes of lactic acid bacteria (LAB) of this milk.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
  23. Differential expression of outer membrane proteins and quinolone resistance determining region mutations can lead to ciprofloxacin resistance in Salmonella Typhi

    • Archives of Microbiology
    • Multi-drug resistance in Salmonella Typhi remains a public health concern globally. This study aimed to investigate the function of quinolone resistance determining region (QRDR) of gyrA and parC in ciprofloxacin (CIP) resistant isolates and examine the differential expression of outer membrane proteins (OMPs) on exposure to sub-lethal concentrations of CIP in S. Typhi.

      • Bacterial pathogens
      • Salmonella
  24. Identification of a novel cyclomaltodextrinase annotated as a neopullulanase in the genome of Bacillus cereus

    • Archives of Microbiology
    • Bacillus cereus is a rod-shaped, gram-positive, motile, and β-hemolytic soil bacterium. B. cereus is an opportunistic pathogen, often responsible for human foodborne illness that is caused by ingestion of starchy foods with symptoms of diarrhea and vomiting. Among the numerous amylolytic enzymes in the genome of the pathogen, the one annotated as a putative neopullulanase (NPase) was cloned and its biochemical properties were characterized in this study.

      • Bacterial pathogens
      • Bacillus cereus
  25. Exploration of the chemical constituents and its antioxidant, antibacterial activities of endophytic fungi isolated from the medicinal plant Dillenia indica

    • Archives of Microbiology
    • Assam, India being the pool for ethnomedicinal plants harbors diverse endophytic fungi constituting major bioactive metabolites. The present study was designed to screen the antioxidant, antibacterial activities along with the chemical constituents of the endophytic fungi isolated from the fruits of Dillenia indica (commonly known as Otenga in Assam).

      • Bacterial pathogens
      • Staphylococcus aureus