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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 36

  1. Fish collagen peptides' modulating effect on human skin microbiota against pathogenic Staphylococcus aureus

    • Future Microbiology
    • Aim: The current research aims to design effective strategies to enhance the body's immune system against pathogenic bacteria. Methods: Skin commensals were isolated, identified and cultured in fish collagen peptides (FCPs). Results: After culturing in FCP, the skin commensals were used in a dose-dependent manner for Staphylococcus aureus in a dual-culture test, which showed significant growth inhibition of the pathogenic bacteria, which conclu

      • Bacterial pathogens
      • Staphylococcus aureus
  2. Biochemical and biophysical analysis of the interaction of a recombinant form of Staphylococcus aureus enolase with plasminogen

    • Future Microbiology
    • Aim: Pathogenic invasion of Staphylococcus aureus is critically dependent on host plasminogen activation. Materials & methods: The pathophysiological implications of the interactions between S. aureus recombinant enolase and host plasminogen were investigated. The effects of mutation and small synthetic peptide inhibitors on interactions were assessed. Results:In vitro, the S.

      • Bacterial pathogens
      • Staphylococcus aureus
  3. Pyrvinium pamoate potentiates levofloxacin against levofloxacin-resistant Staphylococcus aureus

    • Future Microbiology
    • Background: Drug repurposing is a viable approach to expediting the tedious conventional drug discovery process, given rapidly increasing bacterial resistance. In this context, we have repurposed pyrvinium pamoate (PP) for its antibacterial activity against Staphylococcus aureus. Methods: US FDA-approved non-antibiotics were screened against clinically relevant bacterial pathogens to identify antibacterials.

      • Bacterial pathogens
      • Staphylococcus aureus
  4. High rates of macrolide and fluoroquinolone resistance in human campylobacteriosis in the Middle East and North Africa

    • Future Microbiology
    • Campylobacter is one of the main causative agents of bacterial gastrointestinal infections. Recently, a rise in the incidence of campylobacteriosis has been reported worldwide. Despite the clinical importance of this zoonotic disease, its microbiological diagnosis is not systematically performed in clinical laboratories in developing countries such as the Middle East and North Africa region.

      • Bacterial pathogens
      • Campylobacter
  5. Lactic acid bacteria and their bacteriocins: new potential weapons in the fight against methicillin-resistant Staphylococcus aureus

    • Future Microbiology
    • Alternative solutions are eminently needed to combat the escalating number of infections caused by methicillin-resistant Staphylococcus aureus (MRSA). Bacteriocins produced by lactic acid bacteria are promising candidates for next-generation antibiotics. Studies have found that these stable and nontoxic ribosomally synthesized antimicrobial peptides exhibit significant potency against other bacteria, including antibiotic-resistant strains.

      • Bacterial pathogens
      • Staphylococcus aureus
  6. Genetic associations in chronic hepatitis B infection: toward developing polygenic risk scores

    • Future Microbiology
    • Chronic hepatitis B (CHB) infection results in multiple clinical phenotypes of varying severity. One of the critical gaps in CHB management is the lack of a genetic-based tool to aid existing hepatocellular carcinoma and cirrhosis risk stratification models for patients with active CHB. Such individual predictive models for CHB are plagued by an inherent limitation of discriminatory power that clearly indicates the need for their improvement.

      • Viruses
      • Hepatitis
  7. Vibrio metschnikovii isolated from cosmetic products as potential cause of skin infection

    • Future Microbiology
    • Cosmetics intended for human use should be free of microbes involving a potential health hazard. Different points in the cosmetic production process, from the choice of raw materials and the formulation itself to the final packaging, can be critical. The aim of this study is to present the first case of Vibrio metschnikovii isolated from cosmetics in Serbia, which caused signs of skin infection.

      • Bacterial pathogens
      • Vibrio
  8. Antibacterial and synergistic activity of a new 8-hydroxyquinoline derivative against methicillin-resistant Staphylococcus aureus

    • Future Microbiology
    • Aim: To evaluate the antibacterial and synergistic effect of a new 8-hydroxyquinoline derivative (PH176) against MRSA. Materials & methods: PH176 activity was determined by broth microdilution against 38 Staphylococcus aureus clinical isolates. The antibacterial and synergistic effects with oxacillin and nitroxoline were evaluated by time–kill assays to five MRSA isolates.

      • Bacterial pathogens
      • Staphylococcus aureus
  9. Inflammation at the crossroads of Helicobacter pylori and COVID-19

    • Future Microbiology
    • On 11 March 2020, the WHO declared the COVID-19 (SARS-CoV-2) outbreak a pandemic, initially reported in Wuhan, China. Its death rate and global expansion have made it one of the deadliest pandemics in history, with more than 4.8 million confirmed deaths.

      • Viruses
      • COVID-19
  10. Molecular detection of extensively drug-resistant Salmonella Typhi and carbapenem-resistant pathogens in pediatric septicemia patients in Pakistan – a public health concern

    • Future Microbiology
    • To determine the prevalence of multidrug (MDR) and extensively drug-resistant (XDR) pathogens from pediatric blood samples Methods: In total, 4543 children's blood samples were processed in the BacT/ALERT system. Confirmation of the isolates and MIC was determined in VITEK® 2 system. Molecular identification of blaIMP, blaVIM and blaOXA-48 was done by PCR.

      • Salmonella
      • Bacterial pathogens
  11. Virucidal activity of three ethanol-based handrubs against murine norovirus in a hand hygiene clinical simulation study

    • Future Microbiology
    • Aim: We evaluated the efficacy of three ethanol-based hand rubs against murine norovirus in a proposed clinical simulation test (prEN 17430). Materials & methods: Virucidal activity was determined in 18 volunteers using three hand rubs: ethanol 72.4 and 89.5% v/v solutions, and 86% v/v gel. Subjects underwent testing with each product (3/6 ml for 15/30 s) and a reference solution (6 ml 70% v/v ethanol for 60 s).

      • Norovirus
      • Viruses
  12. Focus on a 2019-novel coronavirus (SARS-CoV-2)

    • Future Microbiology
      • COVID-19
  13. N-acetylcysteine as a potential treatment for novel coronavirus disease 2019

    • Future Microbiology
      • COVID-19
  14. The use of radiological imaging alongside reverse transcriptase PCR in diagnosing novel coronavirus disease 2019: a narrative review

    • Future Microbiology
      • COVID-19
  15. COVID-19: in the absence of vaccination – ‘mask-the-nation’

    • Future Microbiology
      • COVID-19
  16. Anal swab as the potentially optimal specimen for SARS-CoV-2 detection to evaluate the hospital discharge of COVID-19 patients

    • Future Microbiology
      • COVID-19
  17. Improved pathogen detection in neonatal sepsis to boost antibiotic stewardship

    • Future Microbiology
  18. A blaVIM-1 positive Aeromonas hydrophila strain in a near-drowning patient: evidence for interspecies plasmid transfer within the patient

    • Future Microbiology
    • Aim: To show that a strain of Aeromonas hydrophila became resistant to carbapenems by interspecies transfer of a plasmid using long-read sequencing. Material & methods: Whole genome sequencing of the four isolates was done using Illumina Hiseq, while the plasmid was reconstructed using the MinION sequencer. The resistome was identified with ResFinder.

      • Bacterial pathogens
  19. Quorum sensing regulates the transcription of lateral flagellar genes in Vibrio parahaemolyticus

    • Future Microbiology
    • Aim: Investigation of the lateral flagellar (Laf) genes transcription by the quorum sensing (QS) regulators AphA and OpaR in Vibrio parahaemolyticus. Materials & methods: Regulation mechanisms were assessed by combined utilization of swarming motility assay, qPCR, LacZ fusion, EMSA and DNase I footprinting. Results: AphA and OpaR oppositely regulate swarming motility and Laf genes.

      • Vibrio
      • Bacterial pathogens
  20. Transcriptome analysis of virulence gene regulation by the ATP-dependent Lon protease in Salmonella Typhimurium

    • Future Microbiology
    • Aim: Determination of the virulence regulatory network controlled by the ATP-dependent Lon protease in Salmonella enterica serovar Typhimurium. Materials & methods: The effect of Lon on S. Typhimurium virulence genes expression was investigated by RNA sequencing, and virulence-associated phenotypes between the wild-type and lon mutant were compared. Results:SPI-1, SPI-4, SPI-9 and flagellar genes were activated, while SPI-2 genes were repressed in the lon mutant.

      • Bacterial pathogens
  21. Developing a multiplex real-time PCR with a new pre-enrichment to simultaneously detect four foodborne bacteria in milk

    • Future Microbiology
    • Aim: The aim of this study is to formulate a new single nonselective pre-enrichment medium (ELSS) that can support the concurrent growth of four major foodborne pathogens containing E. coli O157: H7, L. monocytogenes, S. aureus and S. enterica serovar Entertidis to develop a multiplex TaqMan Real-time PCR (mRT-PCR). Methods: The mRT-PCR with a new pre-enrichment was carried out for simultaneous detection and quantification of these foodborne bacteria.

  22. Systematic review of the Listeria monocytogenes σB regulon supports a role in stress response, virulence and metabolism

    • Future Microbiology
    • Aim: Among the alternative sigma factors of Listeria monocytogenes, σB controls the largest regulon. The aim of this study was to perform a comprehensive review of σB-regulated genes, and the functions they confer. Materials & methods: A systematic search of PubMed and Web of Knowledge was carried out to identify members of the σB regulon based on experimental evidence of σB-dependent transcription and presence of a consensus σB-dependent promoter.

      • Listeria monocytogenes
      • Bacterial pathogens
  23. Challenges in Vibrio parahaemolyticus infections caused by the pandemic clone

    • Future Microbiology
    • Vibrio Parahaemolyticus infections caused by the pandemic clone have become a global public health issue. The pandemic clone includes over ten sequence types and 49 serotypes. Several markers such as toxRS/new, orf8 and genomic islands were considered specific for pandemic strains, but subsequent studies later confirmed a lack of specificity. Thus, identifying stable indicators for the pandemic clone is still an open question.

      • Vibrio
      • Bacterial pathogens
  24. Accuracy of rapid test for diagnosis of hepatitis A with different infection rate settings and with predictive modeling

    • Future Microbiology
    • Aim: We evaluated the accuracy of a commercial rapid immunochromatographic test (rapid test [RT]) for hepatitis A (HA) diagnosis and epidemiological studies. Materials & methods: The accuracy of a RT was evaluated in laboratory and in field conditions. Predictive modeling estimated the test performance in a hypothetical population.

      • Hepatitis
      • Viruses
  25. The CRISPR-cas system promotes antimicrobial resistance in Campylobacter jejuni

    • Future Microbiology
    • Aim: The purpose of current study is to find out relationship between cas9 gene and antimicrobial resistance in Campylobacter jejuni NCTC11168. Materials & methods: The involvement of the cas9 gene in antimicrobial resistance of C.

      • Campylobacter
      • Bacterial pathogens