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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 77

  1. Expression profiles of heat shock protein 70 and high‐mobility groups box‐1 protein in gnotobiotic brine shrimp challenged with different virulence levels of isogenic Vibrio harveyi strains

    • Journal of Fish Diseases
    • Vibrio harveyi is a ubiquitous, bioluminescent marine bacterium that causes vibriosis in both marine vertebrates and invertebrates, leading to significant losses in the global aquaculture industry. Pathogenic Vibrio spp. evade host defensive mechanisms by using different strategies.

      • Bacterial pathogens
      • Vibrio
  2. Comparative proteome analysis revealed potential biomarkers and the underlying immune mechanisms in Vibrio‐resistant hybrid grouper, Epinephelus fuscoguttatus ♀ × Epinephelus lanceolatus ♂

    • Journal of Fish Diseases
    • Abstract Vibrio alginolyticus is the causative agent of vibriosis, a common bacterial infection in grouper aquaculture that is associated with the development of haemorrhagic and non‐haemorrhagic ulcerations on the fish. In the present study, comparative proteome analysis was performed on serum samples from Vibrio‐resistant and Vibrio‐susceptible grouper. Samples were analysed using high‐throughput LC‐MS/MS and identified 2770 unique peptides that corresponded to 344 proteins.

      • Bacterial pathogens
      • Vibrio
  3. Serine protease inhibitor 3 (Serpin3) from Penaeus vannamei selectively interacts with Vibrio parahaemolyticus PirAvp

    • Journal of Fish Diseases
    • Abstract Acute Hepatopancreatic Necrosis Disease (AHPND) represents a significant challenge in the field of shrimp aquaculture. This disease is primarily caused by Vibrio parahaemolyticus strains harbouring the pVA1 plasmid encoding the PirAvp and PirBvp toxins. To combat this epidemic and mitigate its devastating consequences, it is crucial to identify and characterize the receptors responsible for the binding of these pathogenic toxins.

      • Bacterial pathogens
      • Vibrio
  4. Comparative phenotype and transcriptome analysis revealed the role of ferric uptake regulator (Fur) in the virulence of Vibrio harveyi isolated from diseased American eel (Anguilla rostrata)

    • Journal of Fish Diseases
    • Abstract Vibrio harveyi is commonly found in salt and brackish water and is recognized as a serious bacterial pathogen in aquaculture worldwide. In this study, we cloned the ferric uptake regulator (fur) gene from V. harveyi wild‐type strain HA_1, which was isolated from diseased American eels (Anguilla rostrata) and has a length of 450 bp, encoding 149 amino acids. Then, a mutant strain, HA_1‐Δfur, was constructed through homologous recombination of a suicide plasmid (pCVD442).

      • Bacterial pathogens
      • Vibrio
  5. Unveiling the positive impact of biofloc culture on Vibrio parahaemolyticus infection of Pacific white shrimp by reducing quorum sensing and virulence gene expression and enhancing immunity

    • Journal of Fish Diseases
    • Abstract This study aimed to evaluate and unveil the positive impact of biofloc culture on Vibrio parahaemolyticus infection of Pacific white shrimp by reducing quorum sensing (QS) and virulence gene expression and enhancing shrimp's immunity. The shrimp with an average body weight of 0.50 ± 0.09 g were reared in containers with a volume of 2.5 L, 21 units, and a density of 20 shrimp L−1.

      • Bacterial pathogens
      • Vibrio
  6. Phytochemical analysis and antibacterial activity of palm waste extract against Vibrio harveyi and Vibrio parahaemolyticus

    • Journal of Fish Diseases
    • Abstract Vibrio harveyi and Vibrio parahaemolyticus are species of the Vibrio genus that often cause disease and mass mortality in crustaceans. If not handled quickly and appropriately, these diseases can cause considerable losses to farmers. Therefore, it is necessary to find a solution with safe and environmentally friendly disease prevention technology using natural ingredients, among others from plants, namely oil palm.

      • Bacterial pathogens
      • Vibrio
  7. Pathogenic bacteria prevalence in cultured Nile tilapia in Southwest Mexico: A real‐time PCR analysis

    • Journal of Fish Diseases
    • Abstract The present study investigates molecular‐based PCR techniques to estimate the prevalence of fish pathogens in southwest Mexico where recurrent mortality in the tilapia cultures has been observed. Sample of internal organs and lesions of Nile tilapia were taken and analysed in 2018, 2019, 2020 and 2022 to detect bacterial pathogens using PCR. No samples were taken in 2021 due to the COVID‐19 pandemic.

      • Bacterial pathogens
      • Staphylococcus aureus
  8. Mixed Eimeria and Cryptosporidium infection and its effects on pathology and clinical outcomes in juvenile Asian seabass (Lates calcarifer) cultured in Thailand

    • Journal of Fish Diseases
    • Abstract Coccidiosis is an important disease in juvenile fish because of severe intestinal injury during infection. We first reported the mixed infection of intestinal coccidia and its association with health status and pathological findings in juvenile Asian seabass (Lates calcarifer) cultured in Thailand. Two groups of Asian seabass, 60‐day fish and 90‐day fish, were sampled to investigate prevalence and coccidian infection intensity using morphological characterization and PCR.

      • Parasites
      • Cryptosporidium parvum
  9. Identification of a potential antigen stimulating immune response against Vibrio parahaemolyticus infection in hybrid tilapia (Oreochromis aureus♂ × Oreochromis niloticus♀)

    • Journal of Fish Diseases
    • Abstract Vibrio parahaemolyticus (V. parahaemolyticus) is a major pathogen that causes substantial losses in the marine fishery. With the emergence of antibiotic resistance, vaccines have become the most effective approach against V. parahaemolyticus infection. Adhesion factors on the cell surface are pivotal in the colonization and pathogenesis of V. parahaemolyticus within the host, highlighting their potential as vaccine candidates.

      • Bacterial pathogens
      • Staphylococcus aureus
      • Vibrio
  10. Evaluation of the antibacterial activity and protein profiling of Nile tilapia (Oreochromis niloticus) epidermal mucus under different feeds and culture systems (biofloc technology and earthen pond)

    • Journal of Fish Diseases
    • Abstract The mucus layers of fish serve as the main interface between the organism and the environment. They play an important biological and ecological role. The current study focuses on Nile tilapia epidermal mucus reared under different commercial feeds (coded A and B) and environments (biofloc technology and earthen pond systems). Crude protein levels in feed A and B were 30% and 28%, respectively.

      • Bacterial pathogens
      • Staphylococcus aureus
  11. Lufenuron treatment temporarily represses gene expression and affects the SUMO pathway in liver of Atlantic salmon

    • Journal of Fish Diseases
    • Abstract Lufenuron is a benzoylurea insecticide currently in use to combat sea lice infestation in salmon aquaculture in Chile. With pending approval in Norway, the aim of this work was to study the uptake and toxicity of lufenuron in liver tissue of Atlantic salmon. Juvenile salmon weighing 40 g were given a standard 7‐day oral dose, and bioaccumulation and transcriptional responses in the liver were examined 1 day after the end‐of‐treatment (day 8) and after 1 week of elimination (day 14).

      • Chemical contaminants
      • Pesticide residues
  12. Multiple Aeromonas strains isolated from Atlantic salmon (Salmo salar) displaying red skin disease signs in Scandinavian rivers

    • Journal of Fish Diseases
    • Abstract Since 2014, Atlantic salmon (Salmo salar L.) displaying clinical signs of red skin disease (RSD), including haemorrhagic and ulcerative skin lesions, have been repeatedly observed in Swedish rivers. Although the disease has since been reported in other countries, including Norway, Denmark, Ireland and the UK, no pathogen has so far been conclusively associated with RSD.

      • Bacterial pathogens
      • Yersinia
  13. The oral protective efficacy of magnolol against Aeromonas hydrophila and A. veronii infection via enhancing anti‐inflammatory ability in goldfish (Carassius auratus)

    • Journal of Fish Diseases
    • Abstract Aeromonas hydrophila and A. veronii are widespread and important critical pathogenic bacteria in the aquaculture industry and cause severe economic damage. At present, magnolol has been proved to be a broad‐spectrum antibacterial activity, such as A. hydrophila, Staphylococcus aureus and Streptococcus mutans.

      • Bacterial pathogens
      • Staphylococcus aureus
  14. Comprehensive analysis of Vibrio alginolyticus: Environmental risk factors in the cultured Gilthead seabream (Sparus aurata) under seasonal fluctuations and water parameter alterations

    • Journal of Fish Diseases
    • Abstract This study aimed to investigate the relationship between seasonal variations, water parameters and the prevalence of Vibriosis in Gilthead seabream. A total of 160 Gilthead seabream fish were sampled over the course of 1 year from private earthen pond farms in the Suez Canal area and examined for abnormalities and internal lesions. Vibrio alginolyticus, the causative agent of Vibriosis, was isolated and characterized from the sampled Gilthead seabream fish.

      • Bacterial pathogens
      • Vibrio
  15. In vitro modelling of the influence of alternative feeds (Hermetia illucens, Arthrospira platensis) on the resistance of different rainbow trout populations (Oncorhynchus mykiss) against the viral haemorrhagic septicaemia virus and Yersinia ruckeri

    • Journal of Fish Diseases
    • Abstract Replacing fishmeal, a finite resource with high market demand, in the diet of carnivorous rainbow trout with proteins from alternative sources may be a challenge for these fish. Therefore, this study investigated whether replacing fishmeal with protein derived from Hermetia illucens or Arthrospira platensis could promote disease susceptibility in local trout populations with different growth performance.

      • Bacterial pathogens
      • Yersinia
  16. Bactericidal role of epidermal mucus of freshwater fish treated with Aeromonas hydrophila

    • Journal of Fish Diseases
    • Abstract This study explored the bactericidal role of the epidermal mucus (EM) of five freshwater Cyprinid fish species namely Ctenopharyngodon idella, Labeo rohita, Catla catla, Hypophthalmichthys molitrix, and Cirrhinus mrigala after treatment with Aeromonas hydrophila.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
  17. Identification of antibacterial activity of LEAP2 from Antarctic icefish Chionodraco hamatus

    • Journal of Fish Diseases
    • Abstract Liver‐expressed antimicrobial peptide 2 (LEAP2) is a small peptide, which is consisted of signal peptide, pro‐peptide and the bioactive mature peptide. Mature LEAP2 is an antibacterial peptide with four highly conserved cysteines forming two intramolecular disulfide bonds. Chionodraco hamatus, an Antarctic notothenioid fish that lives in the coldest water, has white blood unlike most fish of the world.

      • Bacterial pathogens
      • Staphylococcus aureus
  18. Spotted sea bass (Lateolabrax maculatus) NOD2 gene involved in the immune response against Vibrio harveyi infection

    • Journal of Fish Diseases
    • Journal of Fish Diseases, EarlyView. The spotted sea bass (Lateolabrax maculatus) is an economically important aquaculture fish species in East Asia. Because of its high nutritional value and delectable flavour, spotted sea bass has a high market demand (Chen et al., 2019).

      • Bacterial pathogens
      • Vibrio
  19. Genomic characterization and identification of virulence‐related genes in Vibrio nigripulchritudo isolated from white leg shrimp Penaeus vannamei

    • Journal of Fish Diseases
    • Journal of Fish Diseases, EarlyView. Vibrio nigripulchritudo causes vibriosis in penaeid shrimps. Here, we used Illumina and Nanopore sequencing technologies to sequence the genomes of three of its strains (TUMSAT-V. nig1, TUMSAT-V. nig2, and TUMSAT-V. nig3) to explore opportunities for disease management. Putative virulence factors and mobile genetic elements were detected while evaluating the phylogenetic relationship of each isolated strain.

      • Bacterial pathogens
      • Vibrio
  20. Cold temperature stress and damaged skin induced high mortality in barramundi (Lates calcarifer) challenged with Vibrio harveyi

    • Journal of Fish Diseases
    • Journal of Fish Diseases, EarlyView. Most diseases in aquaculture are caused by opportunistic pathogens. One of them, Vibrio harveyi, is a widespread Gram-negative bacterium that has become an important pathogen of aquatic species in marine environments. Here, we propose the use of the causal pie model as a framework to conceptualize the causation of vibriosis in juvenile barramundi (Lates calcarifer) and to establish an effective challenge model.

      • Bacterial pathogens
      • Vibrio
  21. Molecular mechanisms of the virulence and efficacy of a highly virulent Vibrio anguillarum strain and its formalin‐inactivated vaccine in rainbow trout

    • Journal of Fish Diseases
    • Journal of Fish Diseases, EarlyView. In this study, we have isolated four strains of Vibrio anguillarum, revealing that they share the same serotype of O1, biochemical characteristics and virulence factor genes.

      • Bacterial pathogens
      • Vibrio
  22. Indole‐3‐acetic acid increases the survival of brine shrimp challenged with vibrios belonging to the Harveyi clade

    • Journal of Fish Diseases
    • Journal of Fish Diseases, EarlyView. Vibrios belonging to the Harveyi clade (including closely related species such as Vibrio campbelliiVibrio harveyi and Vibrio parahaemolyticus) are important pathogens of aquatic organisms. In this study, we investigated the use of indole-3-acetic acid to control disease caused by Harveyi clade vibrios.

      • Bacterial pathogens
      • Vibrio
  23. Fast and accurate identification by MALDI‐TOF of the zoonotic serovar E of Vibrio vulnificus linked to eel culture

    • Journal of Fish Diseases
    • Journal of Fish Diseases, EarlyView. Vibrio vulnificus is a zoonotic pathogen that can cause death by septicaemia in farmed fish (mainly eels) and humans. The zoonotic strains that have been isolated from diseased eels and humans after eel handling belong to clade E (or serovar E (SerE)), a clonal complex within the pathovar (pv.) piscis.

      • Bacterial pathogens
      • Vibrio
  24. Screening and activity of potential gastrointestinal probiotic lactic acid bacteria against Yersinia ruckeri O1b

    • Journal of Fish Diseases
    • Journal of Fish Diseases, EarlyView. Yersiniosis of cultured Atlantic salmon is a recurrent fish health management challenge in many continents. The causative organism, Yersinia ruckeri, can reside latently in the gut and lead to acute infection and disease during hatchery and sea-transfer stages. One potential prevention approach is the administration of probiotic bacteria to suppress gut colonization of Yruckeri.

      • Bacterial pathogens
      • Yersinia
  25. Co‐existence of two Yersinia ruckeri biotypes and serotype O1a retrieved from rainbow trout (Oncorhynchus mykiss) farmed in Puno, Peru

    • Journal of Fish Diseases
    • Journal of Fish Diseases, EarlyView. Yersinia ruckeri causes important economic losses for rainbow trout (Oncorhynchus mykiss) farms worldwide. This bacterial disease is likely the most common among trout in Peru; however, no commercial vaccine is available nationally, which is, in part, due to a lack of information on the bacterium. The aim of the current study was to characterize 29 Y.

      • Bacterial pathogens
      • Yersinia