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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 26 - 50 of 226

  1. Serological prevalence and molecular characterization of hepatitis E virus in imported pigs in Singapore (2000–2019)

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Volume 69, Issue 2, Page 286-296, March 2022. Hepatitis E is a significant liver disease caused by infection with hepatitis E virus (HEV). The risk factors for hepatitis E in developed countries include blood transfusion and ingestion of undercooked meat or meat products derived from HEV-infected animals. Since 2000, there has been increased human hepatitis E incidence reported in Singapore.

      • Viruses
      • Hepatitis
  2. Cryptosporidiosis outbreak caused by Cryptosporidium parvum subtype IIdA20G1 in neonatal calves

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Volume 69, Issue 2, Page 278-285, March 2022. Cryptosporidium parvum is a major zoonotic pathogen responsible for outbreaks of severe diarrhoea in humans and calves. Almost all investigations of cryptosporidiosis outbreaks caused by C. parvum have focused on its IIa subtype family in industrialized nations.

      • Parasites
      • Cryptosporidium parvum
  3. Phylogeny and spatio‐temporal dynamics of hepatitis E virus infections in wild boar and deer from six areas of Germany during 2013‐2017

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. The hepatitis E virus (HEV) can cause acute and chronic hepatitis in humans. Infections with the zoonotic HEV genotype 3, which can be transmitted from infected wild boar and deer to humans, are increasingly detected in Europe.

      • Viruses
      • Hepatitis
  4. Prevalence and characteristics of Campylobacter from the genital tract of primates and ruminants in Eastern China

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Campylobacter infection is an important cause of genital failure in ruminants in developed countries. Although historically Campylobacter fetus subspecies fetus has been the main cause of abortion in sheep, C. jejuni is also increasingly associated with sheep abortions.

      • Bacterial pathogens
      • Campylobacter
  5. Campylobacter Positivity and Public Health Risks in Live Bird Markets, Busia, Kenya. A Value Chain Analysis

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Live bird markets (LBMs) provide integral hubs for 95% of poultry produced for food. Surveillance systems in LBMs serving smallholder farmers in sub-saharan Africa are often non-functional and data about public health risks and emerging pathogens are lacking. Studies in Kenya have reported 29% – 44% Campylobacter-prevalence in poultry.

      • Bacterial pathogens
      • Campylobacter
  6. Age and episode‐associated occurrence of Cryptosporidium species and subtypes in a birth‐cohort of dairy calves

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. The role of species-specific immunity in infection patterns of Cryptosporidium spp. in humans and farm animals is not well understood. In the present study, the dynamics of Cryptosporidium infections in a natural cryptosporidiosis model was examined using genotyping, subtyping and whole genome sequencing tools. In a cross-sectional survey of Cryptosporidium spp.

      • Parasites
      • Cryptosporidium parvum
  7. Survey of Staphylococcus aureus carriage by free‐living red deer (Cervus elaphus): evidence of human and domestic animal lineages

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Staphylococcus aureus is a pathogen that can affect multiple host species. Evidence of transmission between humans and animals and among different animal species has been reported in recent years. In this study, we investigated 284 free-living red deer (Cervus elaphus) in the Central Italian Alps to assess the prevalence and molecular characteristics of S.

      • Bacterial pathogens
      • Staphylococcus aureus
  8. Diarrhea outbreak caused by coinfections of Cryptosporidium parvum subtype IIdA20G1 and rotavirus in pre‐weaned dairy calves

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Diarrhea is one of the most important syndromes in neonatal calves. In industrialized nations with intensive animal farming, Cryptosporidium spp. and rotavirus are primary causes of calf diarrhea, but the role of these and other enteric pathogens is not clear in China.

      • Parasites
      • Cryptosporidium parvum
  9. A systematic review, meta‐analysis and meta‐regression of the global prevalence of Toxoplasma gondii infection in wild marine mammals and associations with epidemiological variables

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Toxoplasma gondii infection in wild marine mammals is a growing problem and is associated with adverse impacts on marine animal health and public health. This systematic review, meta-analysis and meta-regression estimates the global prevalence of T. gondii infection in wild marine mammals and analyzes the association between T. gondii infection and epidemiological variables.

      • Parasites
      • Toxoplasma gondii
  10. Dissemination of antimicrobial resistant isolates of Salmonella spp. in wild boars and its relationship with management practices

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Antimicrobial resistance (AMR) is a global concern and controlling its spread is critical for the effectiveness of antibiotics. Members of the genus Salmonella are broadly distributed, and wild boar may play an important role in its circulation between peri-urban areas and the environment, due to its frequent interactions both with livestock or human garbage.

      • Bacterial pathogens
      • Salmonella
  11. Diarrhoea‐causing enteric protist species in intensively and extensively raised pigs (Sus scrofa domesticus) in Southern Spain. Part II: Association with Hepatitis E virus susceptibility

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, EarlyView.

      • Viruses
      • Hepatitis
  12. Screening for hepatitis E virus genotype 3 in red deer (Cervus elaphus) and fallow deer (Dama dama), Portugal, 2018–2020

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, EarlyView.

      • Viruses
      • Hepatitis
  13. Isolation and characterization of a novel strain of duck aviadenovirus B from Muscovy ducklings with acute hepatitis in China

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, EarlyView.

      • Viruses
      • Hepatitis
  14. First report of equine parvovirus‐hepatitis and equine hepacivirus coinfection in horses in Korea

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, EarlyView.

      • Viruses
      • Hepatitis
  15. Serological and molecular survey of hepatitis E virus in cats and dogs in Spain

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, EarlyView.

      • Viruses
      • Hepatitis
  16. Distinct but Connected Avian Influenza Virus Activities in Wetlands and Live Poultry Markets in Bangladesh, 2018–2019

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article.

      • Viruses
  17. Efficacy of bovine brucellosis vaccines: conceptions, challenges and meta‐analysis. Response to the Letter to the Editor concerning “Efficacy of Brucella abortus S19 and RB51 vaccine strains: A systematic review and meta‐analysis” by Blasco et al ...

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article.

      • Bacterial pathogens
  18. First report of equine parvovirus‐hepatitis and equine hepacivirus co‐infection in horses in Korea

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article.

      • Hepatitis
      • Viruses
  19. Brucella induces heme oxygenase‐1 expression to promote its infection

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Brucellosis is a zoonotic and contagious infectious disease caused by Brucella spp, which causes substantial economic losses to animal husbandry and leads to severe public health problems. Brucella have evolved multiple strategies to escape host immunity and survive within host cells. Elucidating the immune evasion strategies during Brucella infection will facilitate the control of brucellosis.

      • Bacterial pathogens
  20. Machine Learning‐driven dynamic risk prediction for highly pathogenic avian influenza at poultry farms, Republic of Korea: daily risk estimation for individual premises

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Highly pathogenic Avian influenza (HPAI) is a fatal zoonotic disease that damages the poultry industry and endangers human lives via exposure to the pathogen. A risk assessment model that precisely predicts high-risk groups and occurrence of HPAI infection is essential for effective biosecurity measures that minimize the socioeconomic losses of massive outbreaks.

      • Viruses
  21. Diarrhoea‐causing enteric protist species in intensively and extensively raised pigs (Sus scrofa domesticus) in Southern Spain. Part II: Association with Hepatitis E virus susceptibility

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Enteropathogenic parasites can infect a wide range of mammals, including humans, supposing an important zoonotic risk. Hepatitis E virus (HEV) is an emerging foodborne pathogen of increasing public health relevance, affecting both human and animal populations. Because both microorganisms share faecal-oral transmission route they may constitute an excellent model to evaluate the interplay between them.

      • Hepatitis
      • Viruses
  22. Strength in numbers: Avian influenza A virus transmission to poultry from a flocking passerine

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. The effects of flock size of European starlings (Sturnus vulgaris) was experimentally manipulated to assess the potential of influenza A virus (IAV; H4N6) transmission from a flocking passerine to bobwhite quail (Colinus virginianus) through shared food and water resources to mimic starling intrusions into free-range and backyard poultry operations.

      • Viruses
  23. Prevalence, main serovars and antimicrobial resistance profiles of Non‐typhoidal Salmonella in poultry samples from the Americas: A systematic review and meta‐analysis

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Poultry and poultry-derived products such as meat and eggs are among the main sources of non-typhoidal Salmonella (NTS) transmission to the human.

      • Salmonella
      • Bacterial pathogens
  24. Molecular characterization of Vibrio cholerae O1 El Tor strains in Malaysia revealed genetically diverse variant lineages

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Vibrio cholerae O1 El Tor variants have been the major causative agents of cholera worldwide since their emergence in the 2000s. Cholera remains endemic in some regions in Malaysia. Therefore, we aimed to investigate the genetic characteristics of the V. cholerae O1 El Tor strains associated with outbreaks and sporadic cases to elucidate the molecular evolution among the strains circulating in this region. A total of 45 V.

      • Vibrio
      • Bacterial pathogens
  25. Analysis of the movement of live broilers in Guangxi, China and implications for avian influenza control

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Most Chinese provinces have a daily-updated database of live animal movements; however, the data are not efficiently utilised to support interventions to control H7N9 and other avian influenzas. Based on official records, this study assessed the spatio-temporal patterns of live broilers moved out of and within Guangxi in 2017. The yearly and monthly networks were analysed for inter- and intra-provincial movements, respectively.

      • Viruses