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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 276 - 300 of 1282

  1. Hyper-aerotolerant Campylobacter coli, an emerging foodborne pathogen, shows differential expressions of oxidative stress-related genes

    • Veterinary Microbiology
      • Bacterial pathogens
      • Campylobacter
  2. Role of substrate availability in the growth of Campylobacter co-cultured with extended spectrum beta-lactamase-producing Escherichia coli in Bolton broth

    • International Journal of Food Microbiology
      • Bacterial pathogens
      • Campylobacter
  3. The Prevalence, Counts and MLST Genotypes of Campylobacter in Poultry Meat and Genomic Comparison with Clinical Isolates

    • Poultry Science
    • Since 2005 campylobacteriosis has been the most commonly reported gastrointestinal infection in humans in the European Union with more than 200,000 cases annually. Also Campylobacter is one of the most frequent cause of food-borne outbreaks with 319 outbreaks reported to EFSA, involving 1,254 cases of disease and 125 hospitalisations in EU in 2019.

      • Bacterial pathogens
      • Campylobacter
  4. Assessment of biofilm formation by Campylobacter spp. isolates mimicking poultry slaughterhouse conditions

    • Poultry Science
    • This research aimed to assess the biofilm formation ability of Campylobacter strains under temperature and oxygen stress conditions, similar to those found in the industrial environment, to explain the persistence of this pathogen on the poultry slaughter line. A collection of C. jejuni and C.

      • Bacterial pathogens
      • Campylobacter
  5. Research Note: MHCY haplotype impacts Campylobacter jejuni colonization in a backcross [(Line 61 x Line N) x Line N] population

    • Poultry Science
    • MHCY is a candidate region for influencing immune responses in chickens. MHCY contains multiple specialized, polymorphic MHC class I loci along with loci belonging to 4 additional gene families.

      • Bacterial pathogens
      • Campylobacter
  6. Examination of Australian backyard poultry for Salmonella, Campylobacter and Shigella spp., and related risk factors

    • Zoonoses and Public Health
    • Zoonoses and Public Health, Volume 69, Issue 1, Page 13-22, February 2022. Worldwide, foodborne illness is a significant public health issue in both developed and developing countries. Salmonellosis, campylobacteriosis and shigellosis are common foodborne gastrointestinal illnesses caused by the bacteria Salmonella spp., Campylobacter spp. and Shigella spp. respectively.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Shigella
  7. Modelling the introduction and transmission of Campylobacter in a North American chicken flock

    • Zoonoses and Public Health
    • Zoonoses and Public Health, Volume 69, Issue 1, Page 23-32, February 2022.

      • Bacterial pathogens
      • Campylobacter
  8. Controlling Campylobacter jejuni in vitro and in chicken using combinations of citrus‐based and trisodium phosphate formulations

    • Journal of Food Safety
    • Journal of Food Safety, Volume 41, Issue 6, December 2021.

      • Bacterial pathogens
      • Campylobacter
  9. A systematic review and meta‐analysis of the efficacy of processing stages and interventions for controlling Campylobacter contamination during broiler chicken processing

    • Comprehensive Reviews in Food Science and Food Safety
    • Comprehensive Reviews in Food Science and Food Safety, EarlyView.

      • Bacterial pathogens
      • Campylobacter
  10. Campylobacterota dominate the microbial communities in a tropical karst subterranean estuary, with implications for cycling and export of nitrogen to coastal waters

    • Environmental Microbiology
    • Environmental Microbiology, Volume 23, Issue 11, Page 6749-6763, November 2021.

      • Bacterial pathogens
      • Campylobacter
  11. Campylobacter Express Resistance Array for detecting the presence of fluoroquinolone‐ and macrolide‐resistant Campylobacter jejuni and Campylobacter coli in broiler farms

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, EarlyView.

      • Bacterial pathogens
      • Campylobacter
  12. The effect of environmental conditions on the occurrence of Campylobacter jejuni and Campylobacter coli in wastewater and surface waters

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 1, Page 725-735, January 2022.

      • Bacterial pathogens
      • Campylobacter
  13. Genotypic analyses and antimicrobial resistance profiles of Campylobacter jejuni from crows (Corvidae) of United States and India reflect their respective local antibiotic burdens

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 1, Page 696-706, January 2022.

      • Bacterial pathogens
      • Campylobacter
  14. The efficacy of organic acid, medium chain fatty acid and essential oil based broiler treatments; in vitro anti‐Campylobacter jejuni activity and the effect of these chemical‐based treatments on broiler performance

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Volume 132, Issue 1, Page 687-695, January 2022.

      • Bacterial pathogens
      • Campylobacter
  15. Prevalence and Characterization of Quinolone Resistance in Campylobacter spp. Isolates in Chicken Livers from Retail Stores in Georgia, USA

    • Campylobacter is the leading bacterial pathogen that causes human foodborne illnesses worldwide and outbreaks have been associated with consumption of under-cooked chicken livers.  The objectives of this study were to compare two PCR assays for speciation of 250 Campylobacter isolates, to assess antibiotic resistance of the isolates, and to analyze genetic diversity of the quinolone resistance determining regions (QRDR) of the isolates.

      • Bacterial pathogens
      • Campylobacter
      • Chemical contaminants
      • Antibiotic residues
  16. Genomic Analysis and Antimicrobial Resistance of Campylobacter jejuni and Campylobacter coli in Peru

    • Frontiers in Microbiology
    • Campylobacter is the leading cause of human bacterial gastroenteritis worldwide and has a major impact on global public health. Whole Genome Sequencing (WGS) is a powerful tool applied in the study of foodborne pathogens. The objective of the present study was to apply WGS to determine the genetic diversity, virulence factors and determinants of antimicrobial resistance of the populations of C. jejuni and C. coli in Peru. A total of 129 Campylobacter strains (108 C. jejuni and 21 C.

      • Campylobacter
      • Bacterial pathogens
  17. Invasive potential of sub-lethally injured Campylobacter jejuni and Salmonella Typhimurium during storage in chicken meat juice

    • Food Control
    • Author(s): Gayani Weerasooriya, Samiullah Khan, Kapil K. Chousalkar, Andrea R. McWhorter Campylobacter jejuni and Salmonella Typhimurium are major foodborne pathogens that cause gastrointestinal infections in humans. Humans can acquire either bacterial species through the consumption of contaminated poultry meat.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
  18. Bacterial Detection and Recovery From Poultry Litter

    • Frontiers in Microbiology
    • The level of pathogens in poultry litter used for raising broiler chickens is critical to the overall health of a broiler chicken flock and food safety. Therefore, it is imperative that methods used for determining bacterial concentration in litter are accurate and reproducible across studies.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
  19. Application of Bacteriophages to Limit Campylobacter in Poultry Production

    • Frontiers in Microbiology
    • Campylobacter is a major foodborne pathogen with over a million United States cases a year and is typically acquired through the consumption of poultry products. The common occurrence of Campylobacter as a member of the poultry gastrointestinal tract microbial community remains a challenge for optimizing intervention strategies.

      • Campylobacter
      • Bacterial pathogens
  20. Investigating the role of BN-domains of FlhF involved in flagellar synthesis in Campylobacter jejuni

    • Microbiological Research
    • Author(s): Xiaofei Li, Qinwen Chai, Lina Zheng, Pingyu Huang, Ozan Gundogdu, Xinan Jiao, Yuanyue Tang, Jinlin Huang

      • Campylobacter
      • Bacterial pathogens
  21. Hyper-aerotolerant Campylobacter coli, an emerging foodborne pathogen, shows differential expressions of oxidative stress-related genes

    • Veterinary Microbiology
    • Author(s): Jae-Ho Guk, JungHa Woo, Hyokeun Song, Woo-Hyun Kim, Jinshil Kim, Sangryeol Ryu, Seongbeom Cho

      • Campylobacter
      • Bacterial pathogens
  22. Identification of Novel Phage Resistance Mechanisms in Campylobacter jejuni by Comparative Genomics

    • Frontiers in Microbiology
    • Phages infecting Campylobacter jejuni are considered a promising intervention strategy at broiler farms, yet phage sensitivity of naturally occurring poultry isolates is not well studied. Here, we investigated phage sensitivity and identified resistance mechanisms of C. jejuni strains originating from Danish broilers belonging to the most prevalent MLST (ST) types. Determining plaque formation of 51 phages belonging to Fletchervirus or Firehammervirus showed that 21 out of 31 C.

      • Bacterial pathogens
      • Campylobacter
  23. Genomic adaptations of Campylobacter jejuni to long-term human colonization

    • Gut Pathogens
    • Background

      • Campylobacter
      • Bacterial pathogens
  24. The Fate of Foodborne Pathogens in Manure Treated Soil

    • Frontiers in Microbiology
    • The aim of this review was to provide an update on the complex relationship between manure application, altered pathogen levels and antibiotic resistance. This is necessary to protect health and improve the sustainability of this major farming practice in agricultural systems based on high levels of manure production.

      • Campylobacter
      • Salmonella
      • Bacterial pathogens
  25. Isolation and Characterization of Group III Campylobacter jejuni–Specific Bacteriophages From Germany and Their Suitability for Use in Food Production

    • Frontiers in Microbiology
    • Campylobacter spp. are a major cause of bacterial foodborne diarrhea worldwide. While thermophilic Campylobacter species asymptomatically colonize the intestines of chickens, most human infections in industrial countries have been attributed to consumption of chicken meat or cross-contaminated products.

      • Bacterial pathogens
      • Campylobacter