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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 326 - 350 of 1282

  1. Evaluation of steam-ultrasound decontamination on naturally contaminated broilers through the analysis of Campylobacter, total viable count, and Enterobacteriaceae

    • Journal of Food Protection
    • Combined steam-ultrasound process was investigated for decontamination of freshly slaughtered broilers. Combined steam-ultrasound was delivered simultaneously through specially designed nozzles. The nozzles were installed inside of a constructed machine that allowed for continuous processing.

      • Campylobacter
      • Bacterial pathogens
  2. Controlling Campylobacter jejuni in vitro and in chicken using combinations of citrus‐based and trisodium phosphate formulations

    • Journal of Food Safety
    • Journal of Food Safety, EarlyView. Campylobacter frequently contaminates chicken. Trisodium phosphate (TSP) is used for chicken decontamination; however, reduction of chemical preservatives is desirable. This study analyzed the efficacy of two commercial citrus-based products (CitroSan [CS] and Citrol-K Ultra [CK]) alone and in combination with TSP for reduction of Campylobacter in vitro and in chicken.

      • Campylobacter
      • Bacterial pathogens
  3. The Distribution of Campylobacter jejuni Virulence Genes in Genomes Worldwide Derived from the NCBI Pathogen Detection Database

    • Genes
    • Campylobacter jejuni (C. jejuni) is responsible for 80% of human campylobacteriosis and is the leading cause of gastroenteritis globally. The relevant public health risks of C. jejuni are caused by particular virulence genes encompassing its virulome. We analyzed 40,371 publicly available genomes of C.

      • Campylobacter
      • Bacterial pathogens
  4. Lactic Acid Bacteria – A Promising Tool for Controlling Chicken Campylobacter Infection

    • Frontiers in Microbiology
    • Since 2005, campylobacteriosis has been the most common zoonotic disease in Europe. The main reservoir of pathogenic Campylobacter strains is broilers, which makes raw and undercooked poultry meat two major sources of disease. Infection in chicken flocks is most often asymptomatic, despite a high level of colonization reaching 106–109cfu/g in animal ceca.

      • Campylobacter
      • Bacterial pathogens
  5. Natural Horizontal Gene Transfer of Antimicrobial Resistance Genes in Campylobacter spp. From Turkeys and Swine

    • Frontiers in Microbiology
    • Antibiotic-resistant Campylobacter constitutes a serious threat to public health. The clonal expansion of resistant strains and/or the horizontal spread of resistance genes to other strains and species can hinder the clinical effectiveness of antibiotics to treat severe campylobacteriosis. Still, gaps exist in our understanding of the risks of acquisition and spread of antibiotic resistance in Campylobacter.

      • Campylobacter
      • Bacterial pathogens
  6. Improved diagnosis of gastrointestinal infections using a semi-automated multiplex real-time PCR for detection of enteropathogens

    • Microbiology
    • The identification of enteropathogens is critical for the clinical management of patients with suspected gastrointestinal infection. The FLOW multiplex PCR system (FMPS) is a semi-automated platform (FLOW System, Roche) for multiplex real-time PCR analysis.

      • Campylobacter
      • Norovirus
      • Salmonella
      • Shigella
      • Giardia lamblia
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
      • Viruses
  7. Competitive growth kinetics of Campylobacter jejuni, Escherichia coli O157:H7, and Listeria monocytogenes with enteric microflora in a small‐intestine model

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Accepted Article. Abstract
      Aims
      The biological events occurring during human digestion help understand the mechanisms underlying the dose-response relationships of enteric bacterial pathogens. To better understand these events, we investigated the growth and reduction behavior of bacterial pathogens in an in vitro model simulating the environment of the small intestine.

      • Campylobacter
      • Escherichia coli O157:H7
      • Listeria monocytogenes
      • Bacterial pathogens
  8. Examination of Australian backyard poultry for Salmonella, Campylobacter and Shigella spp., and related risk factors

    • Zoonoses and Public Health
    • Zoonoses and Public Health, EarlyView. Abstract

      • Campylobacter
      • Salmonella
      • Shigella
      • Bacterial pathogens
  9. Compound Prioritization through Meta-Analysis Enhances the Discovery of Antimicrobial Hits against Bacterial Pathogens

    • Antibiotics
    • The development of informatic tools to improve the identification of novel antimicrobials would significantly reduce the cost and time of drug discovery. We previously screened several plant (Xanthomonas sp., Clavibacter sp., Acidovorax sp., and Erwinia sp.), animal (Avian pathogenic Escherichia coli and Mycoplasma sp.), and human (Salmonella sp.

      • Campylobacter
      • Salmonella
      • Bacterial pathogens
  10. Exploring Changes in the Host Gut Microbiota During a Controlled Human Infection Model for Campylobacter jejuni

    • Frontiers in Cellular and Infection Microbiology
    • Campylobacter jejuni infection is a leading cause of foodborne disease, common to children, adult travelers, and military populations in low- to middle-income countries. In the absence of a licensed vaccine, efforts to evaluate prophylactic agents are underway.

      • Campylobacter
      • Bacterial pathogens
  11. Pharmacokinetics of tulathromycin in pregnant ewes (Ovis aries) challenged with Campylobacter jejuni

    • PLOS ONE
    • by Michael Yaeger, Jonathan P. Mochel, Zuowei Wu, Paul Plummer, Orhan Sahin, Joseph Smith, Melda Ocal, Ashenafi Beyi, Changyun Xu, Qijing Zhang, Ronald W. Griffith

      • Campylobacter
      • Bacterial pathogens
  12. Thermal inactivation and kinetic parameters for Campylobacter jejuni on chicken skin

    • Canadian Journal of Microbiology
    • New Zealand has a higher reported incidence rate of campylobacteriosis than other developed countries. It has been suggested that this may be due to the emergence of heat-resistant strains that can survive normal cooking.

      • Campylobacter
      • Bacterial pathogens
  13. Differential impact of the COVID-19 pandemic on laboratory reporting of norovirus and Campylobacter in England: A modelling approach

    • PLOS ONE
    • by Nikola Ondrikova, Helen E. Clough, Amy Douglas, Miren Iturriza-Gomara, Lesley Larkin, Roberto Vivancos, John P. Harris, Nigel A. Cunliffe

      Background

      • Bacterial pathogens
      • Viruses
      • Campylobacter
      • Norovirus
  14. Cellulosimicrobium fucosivorans sp. nov., isolated from San Elijo Lagoon, contains a fucose metabolic pathway linked to carotenoid production

    • Archives of Microbiology
    • Cellulosimicrobium strain SE3T was isolated from the San Elijo coastal lagoon near San Diego. A whole genome-based phylogenetic comparison shows great heterogeneity within the Cellulosimicrobium genus.

      • Campylobacter
      • Bacterial pathogens
  15. Select Phytochemicals Reduce Campylobacter jejuni in Postharvest Poultry and Modulate the Virulence Attributes of C. jejuni

    • Frontiers in Microbiology
    • Consumption or handling of poultry and poultry products contaminated with Campylobacter species are a leading cause of foodborne illness in humans. Current strategies employed to reduce Campylobacter in live chickens provide inconsistent results indicating the need for an alternative approach.

      • Campylobacter
      • Vibrio
      • Bacterial pathogens
  16. Reduction in Antimicrobial Use and Resistance to Salmonella, Campylobacter, and Escherichia coli in Broiler Chickens, Canada, 2013–2019

    • Emerging Infectious Diseases
    • L. Huber et al. Abstract

      • Campylobacter
      • Salmonella
      • Bacterial pathogens
  17. The ALPK1 pathway drives the inflammatory response to Campylobacter jejuni in human intestinal epithelial cells

    • PLOS Pathogens
    • by Jiannan Cui, Coco Duizer, Lieneke I. Bouwman, Kristel S. van Rooijen, Carlos G. P. Voogdt, Jos P. M. van Putten, Marcel R. de Zoete

      • Campylobacter
      • Bacterial pathogens
  18. Diarrheal Pathogens Associated With Growth and Neurodevelopment

    • Clinical Infectious Diseases
    • Background Diarrheal pathogens have been associated with linear growth deficits. The effect of diarrheal pathogens on growth is likely due to inflammation, which also adversely affects neurodevelopment. We hypothesized that diarrheagenic pathogens would be negatively associated with both growth and neurodevelopment.

      • Campylobacter
      • Norovirus
      • Shigella
      • Bacterial pathogens
      • Viruses
  19. Bioengineering of LAB vector expressing Haemolysin co-regulated protein (Hcp): a strategic approach to control gut colonization of Campylobacter jejuni in a murine model

    • Gut Pathogens
    • Abstract Background

      • Campylobacter
      • Bacterial pathogens
  20. Antimicrobial resistance and genetic diversity of Campylobacter spp. isolated from broiler chicken at three levels of the poultry production chain in Costa Rica.

    • Journal of Food Protection
    • Campylobacter spp. is considered the most common bacterial cause of human gastroenteritis, one of the four main causes of diarrheal disease worldwide, and one of the main foodborne pathogens causing hospitalizations and deaths. A total of 148 strains of Campylobacter spp.   isolated from poultry at farms, processing plants and retail stores in Costa Rica were examined for resistance to six antibiotics.

      • Campylobacter
      • Bacterial pathogens
  21. Phase Variation During Host Colonization and Invasion by Campylobacter jejuni and Other Campylobacter Species

    • Frontiers in Microbiology
    • Phase variation (PV) is a phenomenon common to a variety of bacterial species for niche adaption and survival in challenging environments. Among Campylobacter species, PV depends on the presence of intergenic and intragenic hypermutable G/C homopolymeric tracts. The presence of phase-variable genes is of especial interest for species that cause foodborne or zoonotic infections in humans.

      • Campylobacter
      • Bacterial pathogens
  22. Genomic Characterization of Fluoroquinolone-Resistant Thermophilic Campylobacter Strains Isolated from Layer Chicken Feces in Gangneung, South Korea by Whole-Genome Sequencing

    • Genes
    • Thermophilic Campylobacter species of poultry origin have been associated with up to 80% of human campylobacteriosis cases. Layer chickens have received less attention as possible reservoirs of Campylobacter species.

      • Campylobacter
      • Bacterial pathogens
  23. Hyper-Aerotolerant Campylobacter coli From Swine May Pose a Potential Threat to Public Health Based on Its Quinolone Resistance, Virulence Potential, and Genetic Relatedness

    • Frontiers in Microbiology
    • Campylobacter, a major foodborne pathogen, is susceptible to oxygen. Recently, aerotolerant Campylobacter with enhanced tolerance to aerobic stress has become a major concern in food safety. However, the aerotolerance of Campylobacter coli from pigs has not been studied extensively. Here, we sought to investigate the prevalence of C. coli across multiple swine groups in farms, including weaning, growing, and fattening pigs in production stages and pregnant sows. Additionally, we analyzed C.

      • Campylobacter
      • Bacterial pathogens
  24. Genotypic analyses and antimicrobial resistance profiles of Campylobacter jejuni from crows (Corvidae) of US and India reflect their respective local antibiotic burdens of the areas

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Accepted Article. Aim
      The study examined the hypothesis that crow-borne Campylobacter can function as environmental reservoirs and indicators of antibiotic resistance (AR) determinants circulating in a human population.

      • Campylobacter
      • Bacterial pathogens
  25. Core Genome MLST for Source Attribution of Campylobacter coli

    • Frontiers in Microbiology
    • Campylobacter species are among the leading foodborne bacterial agents of human diarrheal illness. The majority of campylobacteriosis has been attributed to Campylobacter jejuni (85% or more), followed by Campylobacter coli (5–10%). The distribution of C. jejuni and C. coli varies by host organism, indicating that the contribution to human infection may differ between isolation sources. To address the relative contribution of each source to C.

      • Campylobacter
      • Bacterial pathogens