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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 51 - 75 of 1282

  1. Effect of plasma-activated organic acids on different chicken cuts inoculated with Salmonella Typhimurium and Campylobacter jejuni and their antioxidant activity

    • Poultry Science
    • Lactic acid, gallic acid, and their mixture (1% each) were prepared (LA, GA, and LGA) and plasma-activated organic acids (PAOA) were produced through exposure to plasma for 1 h (PAL, PAG, and PLGA).

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
  2. Reducing Campylobacter colonization in broilers by active immunization of naive broiler breeders using a bacterin and subunit vaccine

    • Poultry Science
    • Campylobacter is the main cause of human gastroenteritis worldwide, with 50 to 80% of the cases related to consumption of poultry products.

      • Bacterial pathogens
      • Campylobacter
  3. Research Note: Role of darkling beetles (Alphitobius diaperinus) and litter in spreading and maintaining Salmonella Enteritidis and Campylobacter jejuni in chicken flocks

    • Poultry Science
    • Salmonella and Campylobacter are common foodborne pathogens in chickens, but their persistence mechanisms within flocks are not fully understood.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
  4. Temporal stability and community assembly mechanisms in healthy broiler cecum

    • Frontiers in Microbiology
    • In recent years, there has been an unprecedented advancement in in situ analytical approaches that contribute to the mechanistic understanding of microbial communities by explicitly incorporating ecology and studying their assembly. In this study, we have analyzed the temporal profiles of the healthy broiler cecal microbiome from day 3 to day 35 to recover the stable and varying components of microbial communities.

      • Bacterial pathogens
      • Campylobacter
      • Shigella
  5. Genetic characteristics, antimicrobial susceptibility, and virulence genes distribution of Campylobacter isolated from local dual-purpose chickens in central China

    • Frontiers in Cellular and Infection Microbiology
    • Food-borne antibiotic-resistant Campylobacter poses a serious threat to public health. To understand the prevalence and genetic characteristics of Campylobacter in Chinese local dual-purpose (meat and eggs) chickens, the genomes of 30 Campylobacter isolates, including 13 C. jejuni and 17 C. coli from Jianghan-chickens in central China, were sequenced and tested for antibiotic susceptibility. The results showed that CC-354 and CC-828 were the dominant clonal complexes of C.

      • Bacterial pathogens
      • Campylobacter
  6. Analysis of reservoir sources of Campylobacter isolates to free-range broilers in Denmark

    • Poultry Science
    • Campylobacter is a common cause of food poisoning in many countries, with broilers being the main source. Organic and free-range broilers are more frequently Campylobacter-positive than conventionally raised broilers and may constitute a higher risk for human infections.

      • Bacterial pathogens
      • Campylobacter
  7. Perturbations of gut microbiome and metabolome of pigs infected with Mycoplasma hyorhinis

    • Journal of the Science of Food and Agriculture
    • Abstract Background Mycoplasma hyorhinis is a prevalent respiratory pathogen in swine, causing significant economic loss to pig producers. There is growing evidence that respiratory pathogen infections have a large impact on intestinal microecology. To study the effect of M. hyorhinis infection on gut microbial composition and metabolome profile, pigs were infected with M. hyorhinis.

      • Bacterial pathogens
      • Campylobacter
  8. A comparison of European surveillance programs for campylobacter in broilers

    • Food Control
    • Campylobacter is an important foodborne pathogen as it is associated with significant disease burden across Europe. Among various sources, Campylobacter infections in humans are often related to the consumption of undercooked poultry meat or improper handling of poultry meat. Many European countries have implemented measures to reduce human exposure to Campylobacter from broiler meat.

      • Bacterial pathogens
      • Campylobacter
  9. The efficiency of UV light-emitting diodes (UV-LED) in decontaminating Campylobacter and Salmonella and natural microbiota in chicken breast, compared to a UV pilot-plant scale device

    • Food Microbiology
    • This study investigated the combined effect of Ultraviolet (UV) light-emitting diode (LED) technology treatment with refrigerated storage of chicken breast meat over 7 days on Campylobacter jejuniSalmonella enterica serovar Typhimurium, total viable counts (TVC)

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
  10. Occurrence and survival of Campylobacter spp. in dairy matrices investigated by viability qPCR

    • International Journal of Dairy Technology
    • Route of contamination of raw milk and dairy products by Campylobacter spp., methods of detection and advantages of viability qPCR application to dairy matrices. The aim of this study was to investigate the survival of Campylobacter jejuni in dairy matrices by viability qPCR. Survival in UHT milk was examined first and the cheese outbreak strain, C. jejuni 11 218 showed enhanced tendency to become viable but nonculturable (VBNC).

      • Bacterial pathogens
      • Campylobacter
  11. Prevalence of ciprofloxacin resistance and associated genetic determinants differed among Campylobacter isolated from human and poultry meat sources in Pennsylvania

    • Food Microbiology
    • Poultry is the primary source of Campylobacter infections and severe campylobacteriosis cases are treated with macrolides and fluoroquinolones. However, these drugs are less effective against antimicrobial resistant strains.

      • Bacterial pathogens
      • Campylobacter
  12. Multi-virulence of Campylobacter jejuni carried by chicken meat in Brazil

    • Frontiers in Microbiology
    • Campylobacter jejuni is the most frequent cause of bacterial gastroenteritis; therefore, the characteristics of its epidemiology must be continuously investigated to support possible mitigating measures. This is particularly important when evaluating representative strains from the world's leading chicken meat exporter, Brazil. We evaluated a panel of 14 virulence genes in 359 strains of C. jejuni isolated from chilled broiler carcasses in Brazil.

      • Bacterial pathogens
      • Campylobacter
  13. Intestinal colonization with Campylobacter jejuni affects broiler gut microbiota composition but is not inhibited by daily intake of Lactiplantibacillus plantarum

    • Frontiers in Microbiology
    • Introduction

      Lactobacilli may prevent broilers from colonization with Campylobacter spp. and other gram-negative zoonotic bacteria through lactic acid production and modulation of the intestinal microbiota. This study evaluated the effects of daily intake of Lactiplantibacillus plantarum 256 (LP256) on Campylobacter jejuni (C. jejuni) loads in ceca and feces of C. jejuni challenged broilers, together with the changes in the gut microbiota.

      Methods

      • Bacterial pathogens
      • Campylobacter
  14. Quantitative microbiological risk assessment model for Campylobacter in raw milk of dairy cows in Germany

    • Microbial Risk Analysis
    • The consumer demand for raw milk from dairy cows has increased and local sales via vending machines have been intensified. Therefore, this study aimed to assess the risk associated with the consumption of unboiled raw milk contaminated with Campylobacter by estimating the number of campylobacteriosis cases. For this a stochastic quantitative microbial risk assessment (QMRA) model was developed that covered the whole supply chain.

      • Bacterial pathogens
      • Campylobacter
  15. Outbreaks of Campylobacteriosis Caused by Drinking Raw Milk in Japan: Evidence of Relationship Between Milk and Patients by Using Whole Genome Sequencing

    • Foodborne Pathogens and Disease
    • Raw milk may contain some infectious bacteria and usually requires pasteurization before drinking. In this study, we report rare outbreaks of campylobacteriosis associated with raw milk in Japan, and the application of whole genome sequencing (WGS) to studies on foodborne diseases.

      • Bacterial pathogens
      • Campylobacter
  16. Effectiveness of an increasingly stringent microbiological process hygiene criterion to control Campylobacter in broiler carcasses

    • Food Control
    • Increasing the stringency of microbiological criteria is a risk management measure that can improve food safety and hygiene, but its adoption by governments around the globe is limited.

      • Bacterial pathogens
      • Campylobacter
  17. Avian campylobacteriosis, prevalence, sources, hazards, antibiotic resistance, poultry meat contamination, and control measures: a comprehensive review

    • Poultry Science
    • Avian campylobacteriosis is a vandal infection that poses human health hazards. Campylobacter is usually colonized in the avian gut revealing mild signs in the infected birds, but retail 

      • Bacterial pathogens
      • Campylobacter
  18. Whole-genome sequencing reveals changes in genomic diversity and distinctive repertoires of T3SS and T6SS effector candidates in Chilean clinical Campylobacter strains

    • Frontiers in Cellular and Infection Microbiology
    • Campylobacter is the leading cause of bacterial gastroenteritis worldwide and an emerging and neglected pathogen in South America. This zoonotic pathogen colonizes the gastrointestinal tract of a wide range of mammals and birds, with poultry as the most important reservoir for human infections. Apart from its high morbidity rates, the emergence of resistant strains is of global concern.

      • Bacterial pathogens
      • Campylobacter
  19. Campylobacter fetus foodborne illness outbreak in the elderly

    • Frontiers in Microbiology
    • In June 2021, a cluster of seven cases of Campylobacter fetus infections occurred in a rehabilitation center and caused significant morbidity in elderly patients including five with bacteremia and two with osteoarticular medical device infections. The genetic identity identified by whole genome sequencing of the different Campylobacter fetus strains confirms a common source.

      • Bacterial pathogens
      • Campylobacter
  20. Exudate from retail chicken liver packaging allows for survival of naturally occurring Campylobacter, coliforms, and aerobic microorganisms under drying conditions

    • Journal of Food Protection
    • Campylobacter spp. are a leading cause of human foodborne illness associated with chicken meat products in the United States. Chicken livers, including exudate from packaging, commonly carry Campylobacter and could be a source of illness if mishandled. Survivability of naturally occurring Campylobacter, total aerobic bacteria, and coliforms was determined under drying conditions in two consumer simulated environments: moist sponge, and solid surface.

      • Bacterial pathogens
      • Campylobacter
  21. Modeling the survival of Campylobacter jejuni in raw milk considering the viable but non‐culturable cells (VBNC)

    • Journal of Food Safety
    • Journal of Food Safety, EarlyView. Campylobacter spp. cannot grow in raw milk, but it is able to transform into a viable but non-culturable (VBNC) state enabling the survival in such harsh conditions. In this study, Campylobacter jejuni survival in raw milk was investigated taken into consideration colony-forming units (CFUs) and VBNC cells. CFU from two different strains of C.

      • Bacterial pathogens
      • Campylobacter
  22. A systematic review and meta-analysis of the sources of Campylobacter in poultry production (pre-harvest) and their relative contributions to the microbial risk of poultry meat

    • Poultry Science
    • A systematic review and meta-analysis were conducted to quantify the sources of Campylobacter in poultry live production and their relative contributions to the prevalence of broiler meat. The keywords of Campylobacter, prevalence, live production, and broiler were used in Google Scholar to address the research interest.

      • Bacterial pathogens
      • Campylobacter
  23. Comparative genomic analysis of Campylobacter hepaticus genomes associated with spotty liver disease, Georgia, United States

    • Frontiers in Microbiology
    • Campylobacter hepaticus has re-emerged as an important cause of disease in egg laying birds worldwide, resulting in morbidity, mortality, and significant losses in eggs for the breeding and table egg laying industries. Although birds may appear asymptomatic, the disease is characterized by spots on the liver of birds and histopathological analysis reveals multifocal fibrogranulocytic necrotizing hepatitis microscopically. The re-emergence of C.

      • Bacterial pathogens
      • Campylobacter
      • Viruses
      • Hepatitis
  24. Research Note: Detection of Campylobacter spp. in chicken meat using culture methods and quantitative PCR with propidium monoazide

    • Poultry Science
    • Globally, Campylobacter spp. are prominent causative agents of food-borne gastroenteritis. These pathogens are commonly detected using conventional culture methods; however, culture methods are unable to detect viable but non-culturable (VBNC) bacteria. Currently, the detection rate of Campylobacter spp. on chicken meat does not correlate with the seasonal peak of human campylobacteriosis.

      • Bacterial pathogens
      • Campylobacter
  25. Different stages of the infection cycle are enriched for Campylobacter strains with distinct phenotypes and levels of fluoroquinolone resistance

    • Microbiology
    • Campylobacter species are the leading cause of bacterial diarrhoea worldwide and consumption of contaminated chicken meat is the most common route of infection. Chickens can be infected with multiple strains of Campylobacter and during the infection cycle this pathogen must survive a wide variety of environments.

      • Bacterial pathogens
      • Campylobacter