An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 751 - 775 of 3979

  1. Genomic Analysis of Multidrug-Resistant Salmonella enterica Serovar Kentucky Isolates from Humans, Turkey, and Food in the Republic of Serbia

    • Foodborne Pathogens and Disease
    • Owing to the emerging resistance to antimicrobials in Salmonella Kentucky isolates around the globe, the genomic comparison of all the registered multidrug-resistant Salmonella Kentucky isolates in Serbia (five from humans, one from turkey flock, and one from meat) was done. Most of the isolates were isolated from patients returning from Egypt or Tunisia or originated from imported turkey flock and turkey meat.

      • Bacterial pathogens
      • Salmonella
  2. Multidrug resistance and virulence genes carried by mobile genomic elements in Salmonella enterica isolated from live food animals, processed, and retail meat in North Carolina, 2018–2019

    • International Journal of Food Microbiology
    • An estimated 1000,000 domestic salmonellosis cases are attributed to food as a vehicle of exposure. Among Food Safety and Inspection Service (FSIS)-regulated products, approximately 360,000 salmonellosis cases are associated with consumption of meat, poultry, and egg products. Salmonella vaccination programs instituted in U.S.

      • Bacterial pathogens
      • Salmonella
  3. The impact of Lactobacillus and Bifidobacterium probiotic cocktail on modulation of gene expression of gap junctions dysregulated by intestinal pathogens

    • Archives of Microbiology
    • Probiotics are special bacterial strains with strain specific impacts. They can affect health condition in intestine by producing organic acid, competing with pathogens and maintaining cells homeostasis.

      • Bacterial pathogens
      • Salmonella
  4. p53 gene delivery via a recombinant Salmonella enterica Typhimurium leads to human bladder carcinoma cell death in vitro

    • Letters in Applied Microbiology
    • Letters in Applied Microbiology, Accepted Article. Numerous studies have attempted to restore the function of the tumour suppressor p53 as an anticancer strategy through gene delivery. However, most studies employed non-bacterial vectors to deliver p53.

      • Bacterial pathogens
      • Salmonella
  5. Detection of Salmonella enterica serovar Montevideo in food products using specific PCR primers developed by comparative genomics

    • LWT
    • In the present study, primer-probe sets for the detection of Salmonella enterica and S. enterica serovar Montevideo were developed based on comparative genomics. Genomic information of 706 strains of S. enterica, including 23 strains of serovar Montevideo, was retrieved from National Center for Biotechnology Information (NCBI) RefSeq and analyzed by the panX program.

      • Bacterial pathogens
      • Salmonella
  6. Salmonella enterica subsp. II serovar 4,5,12:a:- may cause gastroenteritis infections in humans

    • Gut Microbes
    • Some serovars of Salmonella are not or rare found to cause salmonellosis in human. In our clinic-based surveillance, three rare Salmonella 4,5,12:a:- strains were recovered from three patients with diarrhea. To explore their genetic and epidemiological characteristics and pathogenesis, we conducted whole-genome sequencing, in vitro invasion assays in mammalian cells, and in vivo virulence assays in an animal model.

      • Bacterial pathogens
      • Salmonella
  7. Prevalence of Antimicrobial Resistance in Select Bacteria From Retail Seafood—United States, 2019

    • Frontiers in Microbiology
    • In 2019, the United States National Antimicrobial Resistance Monitoring System (NARMS) surveyed raw salmon, shrimp, and tilapia from retail grocery outlets in eight states to assess the prevalence of bacterial contamination and antimicrobial resistance (AMR) in the isolates.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
      • Vibrio
  8. Improvement of Mueller-Kauffman Tetrathionate-Novobiocin (MKTTn) enrichment medium for the detection of Salmonella enterica by the addition of ex situ-generated tetrathionate

    • Journal of Microbiological Methods
    • The detection of Salmonella in food is based on the use of a selective enrichment broth such as Muller-Kauffman Tetrathionate-Novobiocin (MKTTn), in which tetrathionate plays a key role by providing Salmonella with a growth advantage. As sodium tetrathionate is unstable, it is generated in situ by the addition of iodine (Lugol's solution) before seeding.

      • Bacterial pathogens
      • Salmonella
  9. Five Complete Salmonella enterica Serotype Reading Genomes Recovered from Patients in the United States

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print.

      • Bacterial pathogens
      • Salmonella
  10. Closed Genome Sequences of Salmonella enterica Serovar Javiana Isolates from Various Sources

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print.

      • Bacterial pathogens
      • Salmonella
  11. Food Handling Practices of Apple Drying in Home Kitchens in the United States: A Survey

    • Fruit drying has traditionally received little food safety attention in spite of Salmonella outbreaks and recalls involving low-moisture foods. This study aimed to assess the food safety implications during the home drying process, using dried apples as an example. A cohort of home apple dryers (N=979) participated in an online survey through Qualtrics XM in May 2021. The results showed that participants’ food handling regarding dried fruit was low.

      • Bacterial pathogens
      • Salmonella
  12. Interlaboratory Evaluation of Enterococcus faecium NRRL B-2354 as a Salmonella Surrogate for Validating Thermal Treatment of Multiple Low-Moisture Foods

    • This multi-institutional study assessed the efficacy of Enterococcus faecium NRRL B-2354 as a non-pathogenic Salmonella surrogate for thermal processing of nonfat dry milk powder, peanut butter, almond meal, wheat flour, ground black pepper, and date paste. Each product was analyzed by two laboratories (five independent laboratories total), with the lead laboratory inoculating (E. faecium or a five-strain Salmonella enterica cocktail of S.

      • Bacterial pathogens
      • Salmonella
      • Chemical contaminants
      • Heavy Metals
  13. The CODEX Guidelines for Risk Analysis of Foodborne Antimicrobial Resistance are Incompatible with Available Surveillance Data

    • Foodborne antimicrobial resistant (AMR) microorganisms are a global food safety concern. Antimicrobial drug use (AMU) in livestock may increase the risk of resistant foodborne bacterial infections in humans via contaminated animal products. Consequently, countries have implemented different livestock AMU restriction policies, opening the potential for trade disputes.

      • Bacterial pathogens
      • Salmonella
  14. Different model hypotheses are needed to account for qualitative variability in the response of two strains of Salmonella spp. under dynamic conditions

    • Food Research International
    • In this article, the thermal inactivation of two Salmonella strains (Salmonella Enteritidis CECT4300 and Salmonella Senftenberg CECT4565) was studied under both isothermal and dynamic conditions. We observed large differences between these two strains, with S. Senftenberg being much more resistant than S. Enteritidis.

      • Bacterial pathogens
      • Salmonella
  15. Genomic and Evolutionary Analysis of Salmonella enterica Serovar Kentucky Sequence Type 198 Isolated From Livestock In East Africa

    • Frontiers in Cellular and Infection Microbiology
    • Since its emergence in the beginning of the 90’s, multidrug-resistant (MDR) Salmonella enterica subsp. enterica serovar Kentucky has become a significant public health problem, especially in East Africa. This study aimed to investigate the antimicrobial resistance profile and the genotypic relatedness of Salmonella Kentucky isolated from animal sources in Ethiopia and Kenya (n=19).

      • Bacterial pathogens
      • Salmonella
      • Chemical contaminants
      • Dioxins
  16. Microfluidic Sampling and Biosensing Systems for Foodborne Escherichia coli and Salmonella

    • Foodborne Pathogens and Disease
    • Developments of portable biosensors for field-deployable detections have been increasingly important to control foodborne pathogens in regulatory environment and in early stage of outbreaks.

      • Bacterial pathogens
      • Salmonella
  17. Assessing the effectiveness of performance standards for Salmonella contamination of chicken parts

    • International Journal of Food Microbiology
    • The United States Department of Agriculture's Food Safety and Inspection Service implemented Salmonella performance standards for establishments producing chicken parts in 2016. The standards were chosen based on the assumption that a 30 % reduction in the occurrence of Salmonella-contaminated chicken parts samples (i.e., legs, breasts or wings) would result following implementation of the performance standard program.

      • Bacterial pathogens
      • Salmonella
  18. Clustered Regularly Interspaced Short Palindromic Repeats Genotyping of Multidrug-Resistant Salmonella Heidelberg Strains Isolated From the Poultry Production Chain Across Brazil

    • Frontiers in Microbiology
    • Salmonella enterica subsp. enterica serovar Heidelberg has been associated with a broad host range, such as poultry, dairy calves, swine, wild birds, environment, and humans. The continuous evolution of S. Heidelberg raises a public health concern since there is a global dispersal of lineages harboring a wide resistome and virulome on a global scale.

      • Bacterial pathogens
      • Salmonella
  19. Epidemiology of blaCTX-M-Positive Salmonella Typhimurium From Diarrhoeal Outpatients in Guangdong, China, 2010–2017

    • Frontiers in Microbiology
    • Salmonella enterica can lead to intestinal diarrhea, and the emergence and spread of cephalosporin-resistant Salmonella have brought great challenges to clinical treatment. Therefore, this study investigated the prevalence and transmission of blaCTX-M genes among S. Typhimurium from diarrhoeal outpatients in Guangdong, China, from 2010 to 2017. A total of 221 blaCTX-M-positive isolates were recovered from 1,263 S.

      • Bacterial pathogens
      • Salmonella
  20. Long Chain Fatty Acids and Virulence Repression in Intestinal Bacterial Pathogens

    • Frontiers in Cellular and Infection Microbiology
    • When bacterial pathogens enter the gut, they encounter a complex milieu of signaling molecules and metabolites produced by host and microbial cells or derived from external sources such as the diet. This metabolomic landscape varies throughout the gut, thus establishing a biogeographical gradient of signals that may be sensed by pathogens and resident bacteria alike.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
      • Vibrio
  21. Strength of Salmonella attachment on apple and tomato surfaces: Effect of antimicrobial treatments on population reduction and inactivation

    • LWT
    • Presence of bacteria and its survival on produce surfaces is important in developing non-thermal processing interventions for food safety.

      • Bacterial pathogens
      • Salmonella
  22. One Health Genomic Analysis of Extended-Spectrum β-Lactamase‒Producing Salmonella enterica, Canada, 2012‒2016

    • Emerging Infectious Diseases
    • Extended-spectrum β-lactamases (ESBLs) confer resistance to extended-spectrum cephalosporins, a major class of clinical antimicrobial drugs. We used genomic analysis to investigate whether domestic food animals, retail meat, and pets were reservoirs of ESBL-producing Salmonella for human infection in Canada. Of 30,303 Salmonella isolates tested during 2012–2016, we detected 95 ESBL producers.

      • Bacterial pathogens
      • Salmonella
  23. Using evolutionary analyses of Salmonella enterica to refine whole-genome sequence match criteria

    • Frontiers in Microbiology
    • Whole-genome sequence databases continue to grow. Collection times between samples are also growing, providing both a challenge for comparing recently collected sequence data to historical samples and an opportunity for evolutionary analyses that can be used to refine match criteria. We measured evolutionary rates for 27 Salmonella enterica serotypes and genomic diversities for 29 serotypes.

      • Bacterial pathogens
      • Salmonella
  24. Mucosal Vaccination: A Promising Alternative Against Flaviviruses

    • Frontiers in Cellular and Infection Microbiology
    • The Flaviviridae are a family of positive-sense, single-stranded RNA enveloped viruses, and their members belong to a single genus, Flavivirus. Flaviviruses are found in mosquitoes and ticks; they are etiological agents of: dengue fever, Japanese encephalitis, West Nile virus infection, Zika virus infection, tick-borne encephalitis, and yellow fever, among others.

      • Bacterial pathogens
      • Salmonella
  25. Complete Genome Sequence of Salmonella Phage vB_SenA_SM5, Active against Multidrug-Resistant Salmonella enterica Serovar Typhi Isolates

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Phage vB_SenA_SM5, active against multiple isolates of multidrug-resistant Salmonella enterica serovar Typhi, was isolated from the sewage water of a tertiary-care referral hospital in Chandigarh, India. It has a 154.4-kb-long double-stranded DNA genome, belongs to the family Ackermannviridae, and is closest to Salmonella phage Chennai, which was isolated in southern India.

      • Bacterial pathogens
      • Salmonella