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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 3975

  1. Megaplasmid Dissemination in Multidrug-Resistant Salmonella Serotypes from Backyard and Commercial Broiler Production Systems in the Southeastern United States

    • Foodborne Pathogens and Disease
    • Over the past decade, there has been a rise in U.S. backyard poultry ownership, raising concern for residential area antimicrobial-resistant (AMR) Salmonella contamination. This study aims to lay the groundwork to better understand the persistence of AMR Salmonella in residential broiler production systems and make comparisons with commercial systems.

      • Bacterial pathogens
      • Salmonella
  2. Occurrence, virulence, and resistance genes in Salmonella enterica isolated from an integrated poultry company in Jordan

    • Poultry Science
    • Salmonella is considered one of the most common foodborne pathogens worldwide. The annual number of hospitalizations and deaths related to zoonotic salmonellosis, which is transmitted from animals to humans and infects poultry and meat, is expected to be significant.

      • Bacterial pathogens
      • Salmonella
  3. An opportunity for post‐harvest seafood safety: atmospheric pressure air or helium cold plasma to control Salmonella Enteritidis in sea bass

    • International Journal of Food Science & Technology
    • The graphical abstract represents the main steps of the study. Air plasma and helium plasma provided a maximum reduction of 2.79 Log CFU in medium and 0.9 and 1.1 Log CFU/g in fish, respectively. Summary Salmonella contamination of fish after harvest is a significant food safety risk. To control this risk, it was aimed to reduce Salmonella Enteritidis in sea bass by helium and air plasma.

      • Bacterial pathogens
      • Salmonella
      • Produce Safety
      • Post Harvest
  4. Recombinase polymerase amplification combined with Pyrococcus furiosus Argonaute for fast Salmonella spp. testing in food safety

    • International Journal of Food Microbiology
    • Foodborne illness caused by Salmonella spp. is one of the most prevalent public health problems globally, which have brought immeasurable economic burden and social impact to countries around the world. Neither current nucleic acid amplification detection method nor standard culture method (2–3 days) are suitable for field detection in areas with a heavy burden of Salmonella spp.

      • Bacterial pathogens
      • Salmonella
  5. Suitability of Escherichia coli ATCC 11229 as Salmonella enterica surrogate for strawberry nectar pasteurization

    • LWT
    • Heat resistance, D- and z-values of five Salmonella enterica strains, namely S. Senftenberg LTH 5703, S. Typhimurium ATCC 13311 and ATCC 14028, S. Saintpaul LTH 6494, and S. Enteritidis ATCC 13076, as well as of a Salmonella cocktail and three potential surrogate strains were investigated in phosphate buffered saline and strawberry nectar (12° Brix).

      • Bacterial pathogens
      • Salmonella
  6. Modelling the Dynamics of Microbial Population and Salmonella spp. in Milk Kefir

    • Food and Bioproducts Processing
    • Kefir is a fermented dairy product based on the fermentation of milk by bacteria and yeasts. It is produced by adding kefir grains, consisting of a consortium of microorganisms, to milk in order to start a natural fermentation (Garofalo et al., 2020).

      • Bacterial pathogens
      • Salmonella
  7. Deciphering Microbiome, Transcriptome, and Metabolic Interactions in the Presence of Probiotic Lactobacillus acidophilus against Salmonella Typhimurium in a Murine Model

    • Antibiotics
    • Salmonella enterica serovar Typhimurium (S. Typhimurium), a foodborne pathogen that poses significant public health risks to humans and animals, presents a formidable challenge due to its antibiotic resistance. This study explores the potential of Lactobacillus acidophilus (L. acidophilus 1.3251) probiotics as an alternative strategy to combat antibiotic resistance associated with S. Typhimurium infection.

      • Bacterial pathogens
      • Salmonella
  8. Combined antibacterial effect of Origanum essential oils and antibiotics against multiresistant foodborne Salmonella isolated from poultry and shellfish in Morocco

    • Journal of Food Safety
    • Combined antibacterial effect of Origanum essential oils and antibiotics against multiresistant foodborne Salmonella in Morocco. Abstract The present study aims to assess the antibacterial activity of endemic Moroccan Origanum essential oils (Origanum elongatum and Origanum compactum) alone and in association with antibiotics against multidrug resistant foodborne Salmonella. The well diffusion and microdilution procedures were used to evaluate the antibacterial activity.

      • Bacterial pathogens
      • Salmonella
  9. Susceptibility of Salmonella enterica Typhimurium dry surface biofilms to disinfection

    • Journal of Food Safety
    • We demonstrated for the first time that Salmonella enterica Typhimurium can form dry surface biofilms (DSB) on surfaces. Mean reduction in viable cells recovered from Salmonella Typhimurium DSB following treatment with water (A and C) or the most efficacious disinfectant formulation (B and D) tested from a panel of candidates, with or without a subsequent wiping step. Contact times used were as per manufacturer's instructions.

      • Bacterial pathogens
      • Salmonella
  10. In Silico Detection of Integrons and Their Relationship with Resistance Phenotype of Salmonella Isolates from a Brazilian Pork Production Chain

    • Foodborne Pathogens and Disease
    • The pork production chain is an important reservoir of antimicrobial resistant bacteria. This study identified and characterized integrons in Salmonella isolates from a Brazilian pork production chain and associate them with their antibiotic resistance pattern. A total of 41 whole-genome sequencing data of nontyphoidal Salmonella were analyzed using PlasmidSPAdes and IntegronFinder software.

      • Bacterial pathogens
      • Salmonella
  11. Navigating the signaling landscape of Ralstonia solanacearum: a study of bacterial two-component systems

    • World Journal of Microbiology and Biotechnology
    • Ralstonia solanacearum, the bacterium that causes bacterial wilt, is a destructive phytopathogen that can infect over 450 different plant species. Several agriculturally significant crop plants, including eggplant, tomato, pepper, potato, and ginger, are highly susceptible to this plant disease, which has a global impact on crop quality and yield. There is currently no known preventive method that works well for bacterial wilt.

      • Bacterial pathogens
      • Salmonella
  12. Persistence of vaccine origin Salmonella Typhimurium through the poultry production continuum, and development of a rapid typing scheme for their differentiation from wild type field isolates

    • Poultry Science
    • Salmonella enterica serovar Typhimurium is one of the top Salmonella serovars annually linked to poultry production and corresponding human illnesses. Because of this, vaccination of commercial poultry against Salmonella Typhimurium has been a focal point in recent years. There are several commercially available Salmonella Typhimurium vaccines available for use in poultry production.

      • Bacterial pathogens
      • Salmonella
  13. Prevalence and transmission of extensively drug-resistant Salmonella enterica serovar Kentucky ST198 based on whole-genome sequence in an intensive laying hen farm in Jiangsu, China

    • Poultry Science
    • Salmonella, which is widely distributed in nature, is an important zoonotic pathogen affecting humans, livestock, and other animals. Salmonella infection not only hinders the development of livestock and poultry-related industries but also poses a great threat to human health.

      • Bacterial pathogens
      • Salmonella
  14. Novel Synergistic Probiotic Intervention: Transcriptomic and Metabolomic Analysis Reveals Ameliorative Effects on Immunity, Gut Barrier, and Metabolism of Mice during Salmonella typhimurium Infection

    • Genes
    • Salmonella typhimurium (S. typhimurium), a prevalent cause of foodborne infection, induces significant changes in the host transcriptome and metabolome. The lack of therapeutics with minimal or no side effects prompts the scientific community to explore alternative therapies. This study investigates the therapeutic potential of a probiotic mixture comprising Lactobacillus acidophilus (L. acidophilus 1.3251) and Lactobacillus plantarum (L. plantarum 9513) against S.

      • Bacterial pathogens
      • Salmonella
  15. Antimicrobial efficacy of a citric acid/hydrochloric acid blend, peroxyacetic acid, and sulfuric acid against Salmonella and background microbiota on chicken hearts and livers

    • Journal of Food Science
    • Abstract This study aimed at evaluating the efficacy of a blend of citric acid and hydrochloric acid (CP), peroxyacetic acid (PAA), and sulfuric acid (SA) against Salmonella and mesophilic aerobic plate counts (APC) on chicken hearts and livers. Samples were inoculated with a five‐serovar cocktail of Salmonella at ca.

      • Bacterial pathogens
      • Salmonella
  16. Comprehensive analysis of Salmonella in poultry meat and products in Türkiye: Prevalence, antibiotic susceptibility and genomic characterisation

    • International Journal of Food Science & Technology
    • The study investigated Salmonella prevalence and antibiotic resistance profiles in various raw chicken products, analysing 293. Among the samples, 38.22% contained Salmonella, with Salmonella Enteritidis and Typhimurium identified in 4.46% and 0.89% of isolates, respectively. Whole genome sequencing revealed distinct clones and antibiotic resistance patterns, underscoring the importance of ongoing Salmonella monitoring in Turkish poultry production for food safety and public health.

      • Bacterial pathogens
      • Salmonella
  17. Assessment of the efficacy of decontamination treatments against Salmonella enterica subsp. enterica serovar Thompson on strawberries at different storage conditions

    • Postharvest Biology and Technology
    • The risk of outbreaks associated with strawberries consumption has led to the evaluation of different antimicrobial strategies. The effect of disinfectants, i.e. chlorine (100 and 200 mg L−1), peracetic acid (40 and 80 mg L−1), lactic acid and hydrogen peroxide (2.5 and 5%), on strawberries contaminated with Salmonella enterica subsp. enterica serovar Thompson during 2 min and stored at different times at two temperatures (20 and 4 °C) was studied.

      • Bacterial pathogens
      • Salmonella
  18. Improving the Composition and Bioactivity of Cocoa (Theobroma cacao L.) Bean Shell Extract by Choline Chloride-Lactic Acid Natural Deep Eutectic Solvent Extraction Assisted by Pulsed Electric Field Pre-Treatment

    • Plant Foods for Human Nutrition
    • An environmentally friendly method for the release of cocoa bean shell (CBS) extracts is proposed in this paper. This work aims to investigate the effect of pulsed electric field (PEF) pre-treatment on subsequent solid-liquid extraction (SLE) of metabolites with choline chloride-lactic acid natural deep eutectic solvent (NaDES) and bioactivity of cocoa bean shell (CBS) extract. Two different media for PEF application were evaluated: water and chlorine chloride-lactic acid.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
      • Staphylococcus aureus
  19. It takes two to attach - endo-1,3-β-d-glucanase as a potential receptor of mannose-independent, FimH-dependent Salmonella Typhimurium binding to spinach leaves

    • Food Microbiology
    • Currently, fresh, unprocessed food has become a relevant element of the chain of transmission of enteropathogenic infections. To survive on a plant surface and further spread the infections, pathogens like Salmonella have to attach stably to the leaf surface.

      • Bacterial pathogens
      • Salmonella
  20. Peeling back the many layers of competitive exclusion

    • Frontiers in Microbiology
    • Baby chicks administered a fecal transplant from adult chickens are resistant to Salmonella colonization by competitive exclusion. A two-pronged approach was used to investigate the mechanism of this process. First, Salmonella response to an exclusive (Salmonella competitive exclusion product, Aviguard®) or permissive microbial community (chicken cecal contents from colonized birds containing 7.85 Log10Salmonella genomes/gram) was assessed ex vivo using a S.

      • Bacterial pathogens
      • Salmonella
  21. Development of a closed-tube, calcein-based loop-mediated isothermal amplification assay to detect Salmonella spp. in raw meat samples

    • Journal of Microbiological Methods
    • Foodborne pathogens compromise food safety and public health, and Salmonella spp. are among the major pathogenic bacteria that cause outbreaks worldwide. Proper surveillance through timely and cost-effective detection methods across the food animal production chain is crucial to prevent Salmonella outbreaks and agricultural losses. Traditional culture methods are labor- and resource-intensive, with lengthy turnaround times.

      • Bacterial pathogens
      • Salmonella
  22. Uncommon Salmonella Infantis Variants with Incomplete Antigenic Formula in the Poultry Food Chain, Italy

    • Emerging Infectious Diseases
    • Uncommon Salmonella enterica serovar Infantis variants with phenotypically identical, incomplete antigenic formula but different molecular serotypes were isolated during 2014‒2022 in different regions of Italy. Most isolates formed rough colonies.

      • Bacterial pathogens
      • Salmonella
  23. Detection of Extended-Spectrum Beta-Lactamase (ESBL)-Producing Enterobacteriaceae from Diseased Broiler Chickens in Lusaka District, Zambia

    • Antibiotics
    • Poultry products in Zambia form an integral part of the human diet in many households, as they are cheap and easy to produce. The burden of poultry diseases has, however, remained a major challenge. Growing consumer demand for poultry products in Zambia has resulted in non-prudent antimicrobial use on farms, intending to prevent and treat poultry diseases for growth optimisation and maximising profits.

      • Bacterial pathogens
      • Salmonella
      • Shigella
  24. In-vitro selection of lactic acid bacteria to combat Salmonella enterica and Campylobacter jejuni in broiler chickens

    • World Journal of Microbiology and Biotechnology
    • Campylobacter and Salmonella are the two most prominent foodborne zoonotic pathogens reported in the European Union. As poultry is one of the major sources of these pathogens, it is imperative to mitigate the colonization of these pathogens in poultry.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
  25. Evaluating the Safety of Sous-Vide Cooking for Beef Products Inoculated with Single Strains of Salmonella enterica and Escherichia coli O157

    • Journal of Food Protection
    • Sous-vide cooking is a growing trend among retailers and consumers. Foodborne pathogens may survive the cooking if non-validated parameters are used or if pathogens have enhanced thermal resistance. Pathogen inactivation from sous-vide cooking was determined when introduced directly to beef products or via contaminated spices, and with or without a finishing step.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Salmonella