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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 176 - 200 of 615

  1. Chitosan-chelated zinc modulates ileal microbiota, ileal microbial metabolites, and intestinal function in weaned piglets challenged with Escherichia coli K88

    • Applied Microbiology and Biotechnology

      • Shigella
      • Bacterial pathogens
  2. Short-Chain Inulin Modulates the Cecal Microbiota Structure of Leptin Knockout Mice in High-Fat Diet

    • Frontiers in Microbiology
    • The aim of this study was to explore the effect of short-chain inulin on cecal microbiota of high-fat diet-fed leptin knockout mice and the different influences of cecal microbiota on wild-type and leptin knockout mice. A total of 18 specific pathogen-free male C57BL/6J wild-type mice and 18 C57BL/6J leptin knockout mice (OB/OB mice) were selected.

      • Shigella
      • Bacterial pathogens
  3. Effects of 3% Boric Acid Solution on Cutaneous Candida albicans Infection and Microecological Flora Mice

    • Frontiers in Microbiology
    • To determine the effect of 3% boric acid solution on cutaneous infections with Candida albicans (CA) in mice and its effect on skin microflora. Female mice were divided into three groups, with 18 mice in each group. Two injection sites were randomly selected, and 0.1 mL of CA mycelium suspension was injected into the epidermis and dermis of the back of mice. Group N was treated with sterile water for injection (SWFI).

      • Shigella
      • Staphylococcus aureus
      • Bacterial pathogens
  4. Examination of Australian backyard poultry for Salmonella, Campylobacter and Shigella spp., and related risk factors

    • Zoonoses and Public Health
    • Zoonoses and Public Health, EarlyView. Abstract

      • Campylobacter
      • Salmonella
      • Shigella
      • Bacterial pathogens
  5. Molecular Characteristics of Novel Phage vB_ShiP-A7 Infecting Multidrug-Resistant Shigella flexneri and Escherichia coli, and Its Bactericidal Effect in vitro and in vivo

    • Frontiers in Microbiology
    • In recent years, increasing evidence has shown that bacteriophages (phages) can inhibit infection caused by multidrug-resistant (MDR) bacteria. Here, we isolated a new phage, named vB_ShiP-A7, using MDR Shigella flexneri as the host. vB_ShiP-A7 is a novel member of Podoviridae, with a latency period of approximately 35 min and a burst size of approximately 100 phage particles/cell. The adsorption rate constant of phage vB_ShiP-A7 to its host S. flexneri was 1.405 × 10–8 mL/min.

      • Shigella
      • Bacterial pathogens
  6. Oxidized Milk Induces Spatial Learning and Memory Impairment by Altering Gut Microbiota in Offspring Mice during Pregnancy and Lactation

    • Journal of Agricultural and Food Chemistry
    • Early adverse diet exposures are known to be associated with increased risk of learning and memory injury in offspring, yet whether oxidized milk is involved in such an effect has been largely unknown. Here, we focused on oxidized milk intake in mice during pregnancy and lactation to measure the changes in the learning and memory ability in offspring and also probed into the relevant association with gut microbiota.

      • Shigella
      • Vibrio
      • Bacterial pathogens
  7. Acquisition and loss of CTX-M plasmids in Shigella species associated with MSM transmission in the UK

    • Microbiology
    • Shigellosis in men who have sex with men (MSM) is caused by multidrug resistant Shigellae, exhibiting resistance to antimicrobials including azithromycin, ciprofloxacin and more recently the third-generation cephalosporins.

      • Shigella
      • Bacterial pathogens
  8. Potential for Phages in the Treatment of Bacterial Sexually Transmitted Infections

    • Antibiotics
    • Bacterial sexually transmitted infections (BSTIs) are becoming increasingly significant with the approach of a post-antibiotic era. While treatment options dwindle, the transmission of many notable BSTIs, including Neisseria gonorrhoeae, Chlamydia trachomatis, and Treponema pallidum, continues to increase. Bacteriophage therapy has been utilized in Poland, Russia and Georgia in the treatment of bacterial illnesses, but not in the treatment of bacterial sexually transmitted infections.

      • Shigella
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
  9. Shigella sonnei, an emerging multidrug-resistant sexually transmitted pathogen in Franche-Comté, France

    • Emerging Microbes & Infections
      • Shigella
      • Bacterial pathogens
  10. Identification of an Intestinal Microbiota Signature Associated With the Severity of Necrotic Enteritis

    • Frontiers in Microbiology
    • Necrotic enteritis (NE), an economically devastating disease of poultry caused by pathogenic Clostridium perfringens, is known to induce small intestinal lesions and dysbiosis. However, the intestinal microbes that are associated with NE severity are yet to be characterized. Here, we investigated the link between the ileal microbiota and disease severity in a chicken model of clinical NE using 16S rRNA gene sequencing.

      • Clostridium perfringens
      • Shigella
      • Staphylococcus aureus
      • Bacterial pathogens
  11. Characterization of the Genitourinary Microbiome of 1,165 Middle-Aged and Elderly Healthy Individuals

    • Frontiers in Microbiology
    • Accumulated evidence shows that complex microbial communities resides in the healthy human urinary tract and can change in urological disorders. However, there lacks a comprehensive profiling of the genitourinary microbiota in healthy cohort. Here, we performed 16S rRNA gene sequencing of midstream urine specimens from 1,172 middle-aged and elderly healthy individuals.

      • Shigella
      • Staphylococcus aureus
      • Bacterial pathogens
  12. Altered Fecal Microbiota Composition in Older Adults With Frailty

    • Frontiers in Cellular and Infection Microbiology
    • Objective

      Frailty is a common geriatric syndrome that is diagnosed and staged based mainly on symptoms. We aimed to evaluate frailty-related alterations of the intestinal permeability and profile fecal microbiota of healthy and frail older adults to identify microbial biomarkers of this syndrome.

      Methods

      • Shigella
      • Bacterial pathogens
  13. The Clinical Presentation of Culture-positive and Culture-negative, Quantitative Polymerase Chain Reaction (qPCR)-Attributable Shigellosis in the Global Enteric Multicenter Study and Derivation of a Shigella Severity Score: Implications for Pediatric...

    • Clinical Infectious Diseases
    • Background Shigella is a leading cause of childhood diarrhea and target for vaccine development. Microbiologic and clinical case definitions are needed for pediatric field vaccine efficacy trials.

      • Shigella
      • Bacterial pathogens
  14. Diarrheal Pathogens Associated With Growth and Neurodevelopment

    • Clinical Infectious Diseases
    • Background Diarrheal pathogens have been associated with linear growth deficits. The effect of diarrheal pathogens on growth is likely due to inflammation, which also adversely affects neurodevelopment. We hypothesized that diarrheagenic pathogens would be negatively associated with both growth and neurodevelopment.

      • Campylobacter
      • Norovirus
      • Shigella
      • Bacterial pathogens
      • Viruses
  15. Discovery and Bioactivity of the Novel Lasso Peptide Microcin Y

    • Journal of Agricultural and Food Chemistry
    • Lasso peptides, a class of ribosomally synthesized and post-translationally modified peptides (RiPPs) secreted by bacteria, have antimicrobial activity. Here, a novel lasso peptide, microcin Y (MccY), was discovered and characterized. The gene cluster for MccY synthesis was cloned for expression in Escherichia coli. This peptide was purified by HPLC and characterized by Q-TOF.

      • Salmonella
      • Shigella
      • Staphylococcus aureus
      • Bacterial pathogens
  16. Effects of three essential oils and their nano-emulsions on Listeria monocytogenes and Shigella flexneri in Egyptian Talaga cheese

    • International Journal of Food Microbiology
    • Author(s): Walaa M. Elsherif, Lamiaa M. Talaat AL Shrief

      • Bacterial pathogens
      • Listeria monocytogenes
      • Shigella
  17. Selective Thermotolerant Lactic Acid Bacteria Isolated From Fermented Juice of Epiphytic Lactic Acid Bacteria and Their Effects on Fermentation Quality of Stylo Silages

    • Frontiers in Microbiology
    • The aim of the present study was to isolate and identify lactic acid bacteria (LAB) from fermented juice of tropical crops such as Napier grass, Ruzi grass, Purple guinea grass, Stylo legume, and Leucaena and their application to improve the quality of tropical crop silage. Fifteen strains of LAB were isolated.

      • Shigella
      • Bacterial pathogens
      • Bacillus cereus
  18. Shigella escapes lysosomal degradation through inactivation of Rab31 by IpaH4.5

    • Microbiology
    • is an intracellular bacterial pathogen that utilizes a type III secretion apparatus to inject effector proteins into host cells.

      • Bacterial pathogens
      • Shigella
  19. Behavior of Salmonella Enteritidis and Shigella flexneri during induction and recovery of the viable but nonculturable state

    • FEMS Microbiology Letters
    • ABSTRACT Bacteria may enter into a viable but nonculturable (VBNC) state as a response to stresses, such as those found in food processing. Cells in the VBNC state lose the ability to grow in a conventional culture medium but man recover culturability. The viability, culturability and intracellular reactive oxygen species (ROS) of Salmonella Enteritidis and Shigella flexneri were evaluated under stress conditions to induce a VBNC state.

      • Salmonella
      • Shigella
      • Bacterial pathogens
  20. Therapeutic target identification via differential genome analysis of antibiotic resistant Shigella sonneii and inhibitor evaluation against a selected drug target

    • Infection, Genetics and Evolution
    • Author(s): Zarrin Basharat, Muhammad Jahanzaib, Noor Rahman

      • Shigella
      • Bacterial pathogens
  21. Virulence factors and molecular characteristics of Shigella flexneri isolated from calves with diarrhea

    • BMC Microbiology
    • Background
      The natural hosts of Shigella are typically humans and other primates, but it has been shown that the host range of Shigella has expanded to many animals. Although Shigella is becoming a major threat to animals, there is limited information on the genetic background of local strains. The purpose of this study was to assess the presence of virulence factors and the molecular characteristics of S. flexneri isolated from calves with diarrhea.

      • Shigella
      • Bacterial pathogens
  22. Modulation of the Intestinal Microbiota by the Early Intervention with Clostridium Butyricum in Muscovy Ducks

    • Antibiotics
    • This study evaluated the effects of early intervention with Clostridium butyricum (C. butyricum) on shaping the intestinal microbiota of Muscovy ducklings. A total of 160 1-day-old male ducks were randomly divided into two groups: the CB group was administered with 1 mL of C. butyricum (2 × 109 CFU/mL), while the C group was given 1 mL of saline. The administration lasted for 3 days. We found that C. butyricum had no significant effect on growth performance.

      • Shigella
      • Bacterial pathogens
  23. Differences in Manifestations and Gut Microbiota Composition Between Patients With Different Henoch-Schonlein Purpura Phenotypes

    • Frontiers in Cellular and Infection Microbiology
    • Background

      Gut microbiota plays an important role in the pathogenesis of immune-mediated diseases. However, the complex pathogenesis of Henoch-Schonlein Purpura (HSP) remains elusive. This study aimed to characterize the gut microbiota in HSP patients and explore the potential association between gut microbiota composition and phenotypic changes in HSP.

      Methods

      • Shigella
      • Bacterial pathogens
  24. Circulation of multidrug-resistant Shigella sonnei and Shigella flexneri among men who have sex with men in Barcelona, Spain, 2015-2019.

    • International Journal of Antimicrobial Agents
    • Author(s): Albert Moreno-Mingorance, Paula Espinal, Virginia Rodriguez, Lidia Goterris, Anna Fàbrega, Judit Serra-Pladevall, M. Jesús Barberà, M. Alberny, Héctor Martín-González, Thais Cornejo-Sánchez, Mayuli Armas, Alba Mir-Cros, Alex Raventós, Belén Viñado, T. Pumarola, M.N. Larrosa, Juan José González-López

      • Shigella
      • Bacterial pathogens
  25. Lactosmart: A Novel Therapeutic Molecule for Antimicrobial Defense

    • Frontiers in Microbiology
    • The problem of antibiotic resistance has prompted researchers around the globe to search for new antimicrobial agents. Antimicrobial proteins and peptides are naturally secreted by almost all the living organisms to fight infections and can be safer alternatives to chemical antibiotics. Lactoferrin (LF) is a known antimicrobial protein present in all body secretions.

      • Shigella
      • Staphylococcus aureus
      • Bacterial pathogens