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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 76 - 100 of 300

  1. The Small Protein YmoA Controls the Csr System and Adjusts Expression of Virulence-Relevant Traits of Yersinia pseudotuberculosis

    • Frontiers in Microbiology
    • Virulence gene expression of Yersinia pseudotuberculosis changes during the different stages of infection and this is tightly controlled by environmental cues. In this study, we show that the small protein YmoA, a member of the Hha family, is part of this process. It controls temperature- and nutrient-dependent early and later stage virulence genes in an opposing manner and co-regulates bacterial stress responses and metabolic functions.

      • Yersinia
      • Bacterial pathogens
  2. Aerobactin-Mediated Iron Acquisition Enhances Biofilm Formation, Oxidative Stress Resistance, and Virulence of Yersinia pseudotuberculosis

    • Frontiers in Microbiology
    • Aerobactin is a citrate-hydroxamate siderophore that is critical for the virulence of pathogenic enteric bacteria. However, although the aerobactin-producing iucABCD-iutA operon is distributed widely in the genomes of Yersinia species, none of the pathogenic Yersinia spp. was found to produce aerobactin. Here, we showed that the iucABCD-iutA operon in the food-borne enteric pathogen Yersinia pseudotuberculosis YPIII is a functional siderophore system involved in iron acquisition.

      • Yersinia
      • Bacterial pathogens
  3. Modifying TIMER to generate a slow-folding DsRed derivative for optimal use in quickly-dividing bacteria

    • PLOS Pathogens
    • by Pavan Patel, Brendan J. O’Hara, Emily Aunins, Kimberly M. Davis

      • Bacterial pathogens
      • Yersinia
  4. Comparison of droplet digital PCR vs real-time PCR for Yersinia enterocolitica detection in vegetables

    • International Journal of Food Microbiology
    • Author(s): D. Cristiano, M.F. Peruzy, M. Aponte, A. Mancusi, Y.T.R. Proroga, F. Capuano, N. Murru

      • Yersinia
      • Bacterial pathogens
  5. Biologically synthesized silver nanoparticles, mediated by Bothriochloa laguroides, inhibit biofilm formation and eradicate mature biofilm of Yersinia enterocolitica and Staphylococcus aureus.

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Accepted Article. Aims
      To phytosynthesize silver nanoparticles (AgNPs) and determine their antibacterial and antibiofilm capacity against gram-positive and negative bacterial strains.

      • Yersinia
      • Staphylococcus aureus
      • Bacterial pathogens
  6. Occurrence, molecular characterization, and antimicrobial susceptibility of Yersinia enterocolitica isolated from retail food samples in China

    • LWT
    • Author(s): Juan Wang, Ming Liu, Huixian Wang, Qingping Wu, Yu Ding, Tianxiang Xu, Guoxiang Ma, Yueming Zhong, Jumei Zhang, Moutong Chen, Liang Xue, Qinghua Ye, Haiyan Zeng, Xiaojuan Yang, Runshi Yang

      • Yersinia
      • Bacterial pathogens
  7. Plague vaccines: new developments in an ongoing search

    • Applied Microbiology and Biotechnology

      • Yersinia
      • Bacterial pathogens
  8. Evaluation of the membrane damage mechanism of protocatechualdehyde against Yersinia enterocolitica and simulation of growth inhibition in pork

    • Food Chemistry
    • Author(s): Lu Tian, Xuyang Wang, Di Zhang, Mi Wu, Zhifei Xue, Zhiqiang Liu, Siqi Yang, Hui Li, Guoli Gong

      • Yersinia
      • Bacterial pathogens
  9. Analysis of Yersinia pseudotuberculosis Isolates Recovered from Deceased Mammals of a German Zoo Animal Collection

    • Journal of Clinical Microbiology
    • Yersinia pseudotuberculosis is an important pathogen for both humans and animals. It can infect livestock, as well as pets and wild animals. During recent years, a number of reports have described the isolation of Y. pseudotuberculosis from zoo animals, mainly birds and mammals, for which the infection was mostly lethal. Between 2005 and 2019, there were at least 17 cases of deceased mammals, belonging to five different species, which suffered from a Y.

      • Yersinia
      • Bacterial pathogens
  10. OmpA, a Common Virulence Factor, Is Under RNA Thermometer Control in Yersinia pseudotuberculosis

    • Frontiers in Microbiology
    • The outer membrane protein OmpA is a virulence factor in many mammalian pathogens. In previous global RNA structure probing studies, we found evidence for a temperature-modulated RNA structure in the 5'-untranslated region (5'-UTR) of the Yersinia pseudotuberculosis ompA transcript suggesting that opening of the structure at host-body temperature might relieve translational repression.

      • Yersinia
      • Bacterial pathogens
  11. Molecular Characterization of Multidrug-Resistant Yersinia enterocolitica From Foodborne Outbreaks in Sweden

    • Frontiers in Microbiology
    • The foodborne pathogen Yersinia enterocolitica causes gastrointestinal infections worldwide. In the spring of 2019, the Swedish Public Health Agency and Statens Serum Institut in Denmark independently identified an outbreak caused by Yersinia enterocolitica 4/O:3 that after sequence comparison turned out to be a cross-border outbreak. A trace-back investigation suggested shipments of fresh prewashed spinach from Italy as a common source for the outbreak.

      • Salmonella
      • Yersinia
      • Shigella
      • Bacterial pathogens
  12. Complete Genome Assembly of Multidrug-Resistant Yersinia enterocolitica Y72, Isolated in Sweden

    • Microbiology Resource Announcements
    • Here, we report the complete genome sequence of a Swedish clinical strain of Yersinia enterocolitica, Y72. With emerging Yersinia outbreaks circulating in Nordic countries, the Y72 genome will provide more insights on the genetic relatedness and antibiotic resistance dissemination in future studies.

      • Yersinia
      • Bacterial pathogens
  13. The transcriptional regulator Zur regulates the expression of ZnuABC and T6SS4 in response to stresses in Yersinia pseudotuberculosis

    • Microbiological Research
    • Author(s): Ran Cai, Fen Gao, Junfeng Pan, Xinwei Hao, Zonglan Yu, Yichen Qu, Jialin Li, Dandan Wang, Yao Wang, Xihui Shen, Xingyu Liu, Yantao Yang

      • Yersinia
      • Bacterial pathogens
  14. Distinct H2O2-Scavenging System in Yersinia pseudotuberculosis: KatG and AhpC Act Together to Scavenge Endogenous Hydrogen Peroxide

    • Frontiers in Microbiology
    • To colonize in the digestive tract of animals and humans, Yersinia pseudotuberculosis has to deal with reactive oxygen species (ROS) produced by host cells and microbiota. However, an understanding of the ROS-scavenging systems and their regulation in this bacterium remains largely elusive. In this study, we identified OxyR as the master transcriptional regulator mediating cellular responses to hydrogen peroxide (H2O2) in Y. pseudotuberculosis through genomics and transcriptomics analyses.

      • Yersinia
      • Bacterial pathogens
  15. The Transmembrane Mucin MUC1 Facilitates {beta}1-Integrin-Mediated Bacterial Invasion

    • mBio
    • ABSTRACT At the intestinal host-microbe interface, the transmembrane mucin MUC1 can function as a physical barrier as well as a receptor for bacteria. MUC1 also influences epithelial cell morphology and receptor function. Various bacterial pathogens can exploit integrins to infect eukaryotic cells. It is yet unclear whether MUC1 influences the interaction of bacteria with integrins.

      • Bacterial pathogens
      • Yersinia
  16. Yersinia enterocolitica Outbreak Associated with Pasteurized Milk

    • Foodborne Pathogens and Disease
    • In July 2019, we investigated a cluster of Yersinia enterocolitica cases affecting a youth summer camp and nearby community in northeastern Pennsylvania. After initial telephone interviews with camp owners and community members, we identified pasteurized milk from a small dairy conducting on-site pasteurization, Dairy A, as a shared exposure. We conducted site visits at the camp and Dairy A where we collected milk and other samples. Samples were cultured for Y. enterocolitica.

      • Bacterial pathogens
      • Yersinia
  17. Characterization of the binding motif for the T3SS master regulator LcrF in Yersinia pseudotuberculosis

    • FEMS Microbiology Letters
    • ABSTRACT LcrF is the master regulator that positively regulates the Ysc type III secretion system (T3SS) in Yersinia and shares a high similarity with the DNA-binding domain of the T3SS master regulator ExsA in Pseudomonas aeruginosa. Based on these features, bioinformatics analysis has predicted a putative LcrF-binding site in its target promoters. Here, we experimentally characterized its binding motif.

      • Bacterial pathogens
      • Yersinia
  18. Complete, closed and curated genome sequences of Photobacterium damselae subsp. piscicida isolates from Australia indicate mobilome-driven localized evolution and novel pathogenicity determinants

    • Microbiology
    • Despite the recent advances in sequencing technologies, the complete assembly of multi-chromosome genomes of the , often containing several plasmids, remains challenging.

      • Bacterial pathogens
      • Yersinia
      • Vibrio
  19. Take my breath away: studying pathogen invasion of the human lung using primary tissue models

    • Pathogens and Disease
    • ABSTRACT The human pulmonary environment is complex, containing a matrix of cells, including fibroblasts, epithelial cells, interstitial macrophages, alveolar macrophages and neutrophils. When confronted with foreign material or invading pathogens, these cells mount a robust response. Nevertheless, many bacterial pathogens with an intracellular lifecycle stage exploit this environment for replication and survival.

      • Yersinia
      • Staphylococcus aureus
      • Bacterial pathogens
  20. Spatiotemporal Variations in Growth Rate and Virulence Plasmid Copy Number during Yersinia pseudotuberculosis Infection

    • Infection and Immunity
    • Pathogenic Yersinia spp. depend on the activity of a potent virulence plasmid-encoded ysc/yop type 3 secretion system (T3SS) to colonize hosts and cause disease. It was recently shown that Yersinia pseudotuberculosis upregulates the virulence plasmid copy number (PCN) during infection and that the resulting elevated gene dose of plasmid-encoded T3SS genes is essential for virulence.

      • Bacterial pathogens
      • Yersinia
  21. First investigation of pathogenic bacteria, protozoa and viruses in rodents and shrews in context of forest-savannah-urban areas interface in the city of Franceville (Gabon)

    • PLOS ONE
    • by Joa Braïthe Mangombi, Nadine N’dilimabaka, Jean-Bernard Lekana-Douki, Octavie Banga, Sydney Maghendji-Nzondo, Mathieu Bourgarel, Eric Leroy, Florence Fenollar, Oleg Mediannikov

      • Toxoplasma gondii
      • Bacterial pathogens
      • Parasites
      • Yersinia
  22. Elastic Light Scatter Pattern Analysis for the Expedited Detection of Yersinia Species in Pork Mince: Proof of Concept

    • Frontiers in Microbiology
    • Isolation of the pathogens Yersinia enterocolitica and Yersinia pseudotuberculosis from foods typically rely on slow (10–21 day) “cold enrichment” protocols before confirmed results are obtained. We describe an approach that yields results in 39 h that combines an alternative enrichment method with culture on a non-selective medium, and subsequent identification of suspect colonies using elastic light scatter (ELS) analysis.

      • Yersinia
      • Bacterial pathogens
  23. Modification of the Pulmonary MyD88 Inflammatory Response Underlies the Role of the Yersinia pestis Pigmentation Locus in Primary Pneumonic Plague

    • Infection and Immunity
    • Pneumonic plague, caused by Yersinia pestis, is a rapidly progressing bronchopneumonia involving focal bacterial growth, neutrophilic congestion, and alveolar necrosis. Within a short time after inhalation of Y. pestis, inflammatory cytokines are expressed via the Toll/interleukin-1 (IL-1) adaptor myeloid differentiation primary response 88 (MyD88), which facilitates the primary lung infection. We previously showed that Y.

      • Yersinia
      • Bacterial pathogens
  24. Detection, virulence genes and antimicrobial resistance of Yersinia enterocolitica in sheep and goat raw milk

    • International Dairy Journal
    • Author(s): Francesca Piras, Carlo Spanu, Rita Sanna, Giuliana Siddi, Anna Maria Mocci, Mariella Demontis, Maria Pina Meloni, Vincenzo Spanu, Enrico Pietro Luigi De Santis, Christian Scarano

      • Yersinia
      • Bacterial pathogens
  25. The Spectrum of Antimicrobial Activity of Cyadox against Pathogens Collected from Pigs, Chicken, and Fish in China

    • Antibiotics
    • Cyadox has potential use as an antimicrobial agent in animals. However, its pharmacodynamic properties have not been systematically studied yet. In this study, the in vitro antibacterial activities of cyadox were assayed, and the antibacterial efficacy of cyadox against facultative anaerobes was also determined under anaerobic conditions.

      • Clostridium perfringens
      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Yersinia
      • Vibrio