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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 4776 - 4800 of 18443

  1. Loss of YggS (COG0325) impacts aspartate metabolism in Salmonella enterica

    • Molecular Microbiology
    • Molecular Microbiology, Accepted Article. ABSTRACT

      • Salmonella
      • Bacterial pathogens
  2. Effects of different salinity conditions on the transcriptome and antibiotic resistance of two Vibrio parahaemolyticus strains isolated from Penaeus vannamei cultured in seawater and freshwater ponds

    • Journal of Fish Diseases
    • Journal of Fish Diseases, EarlyView. Abstract

      • Vibrio
      • Bacterial pathogens
  3. Fate and mitigation of Salmonella contaminated in lettuce (Lactuca sativa) seeds grown in a hydroponic system

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Accepted Article. Abstract
      Aims
      We investigated the fate of Salmonella in lettuce seeds grown in a hydroponic system and the potentials of applying photodynamic inactivation (PDI) to enhance microbial safety of hydroponic farming systems.

      • Salmonella
      • Bacterial pathogens
  4. VicPred: A Vibrio cholerae Genotype Prediction Tool

    • Frontiers in Microbiology
    • Genomic information can be used to predict major pathogenic traits of pathogens without the need for laboratory experimentation. However, no Vibrio cholerae genome-based trait identification tools currently exist. The aim of this study was to develop a web-based prediction tool to identify Vibrio pathogenic traits using publicly available 796 whole-genome sequences of V. cholerae. Using this application, 68 structural O-antigen gene clusters belonging to 49 serogroups of V.

      • Vibrio
      • Bacterial pathogens
  5. An investigation into the anaerobic spoilage microbiota of beef carcass and rump steak cuts using high- throughput sequencing

    • FEMS Microbiology Letters
    • ABSTRACT The presence of anaerobic microflora on fresh beef carcass and rump steaks, which may contribute to meat spoilage, was explored in this study. A total of 120 carcass and 120 rump steak swabs were collected immediately after slaughtering and boning, respectively from five meat plants, anaerobically incubated and enriched at 4°C for 3 weeks.

      • Shigella
      • Bacterial pathogens
  6. Emergence of blaNDM-1 and blaVIM producing Gram-negative bacilli in ventilator-associated pneumonia at AMR Surveillance Regional Reference Laboratory in India

    • PLOS ONE
    • by Mithlesh Kumari, Sheetal Verma, Vimala Venkatesh, Prashant Gupta, Piyush Tripathi, Avinash Agarwal, Suhail Sarwar Siddiqui, Zia Arshad, Ved Prakash

      Introduction

      Ventilator-associated pneumonia (VAP) may be a life threatening nosocomial infection encountered in intensive care units. Currently the emergence of carbapenem-resistant Gram-negative pathogens has become worrisome threat worldwide.

      Material and methods

      • Staphylococcus aureus
      • Bacterial pathogens
  7. Characterization of a mercury tolerant strain of Staphylococcus arlettae from Darjeeling hills with an account of its antibiotic resistance pattern and metabolome

    • Archives of Microbiology
    • Mercury (Hg) is a ubiquitous heavy metal grouped with the top ten most toxic pollutants affecting both human and environmental health. Consequently, mercury contamination due to anthropogenic interference has become a rising global concern. The bacterial strain MTD10A was isolated from soil samples collected over the Darjeeling hills.

      • Staphylococcus aureus
      • Bacterial pathogens
  8. Secretome Analysis Reveals A Role of Subinhibitory Concentrations of Polymyxin B in the Survival of A Vibrio Cholerae Mediated by the Type VI Secretion System

    • Environmental Microbiology
    • Environmental Microbiology, Accepted Article. Antimicrobials are commonly used in prevention of infections including in aquaculture, agriculture and medicine. Subinhibitory concentrations of antimicrobial peptides (AMPs) can modulate resistance, virulence and persistence effectors in Gram-negative pathogens.

      • Vibrio
      • Bacterial pathogens
  9. Comparative Genome Analysis and Spore Heat Resistance Assay Reveal a New Component to Population Structure and Genome Epidemiology Within Clostridium perfringens Enterotoxin-Carrying Isolates

    • Frontiers in Microbiology
    • Clostridium perfringens causes a variety of human and animal enteric diseases including food poisoning, antibiotic-associated diarrhea, and necrotic enteritis. Yet, the reservoirs of enteropathogenic enterotoxin-producing strains remain unknown. We conducted a genomic comparison of 290 strains and a heat resistance phenotyping of 30 C. perfringens strains to elucidate the population structure and ecology of this pathogen. C.

      • Clostridium perfringens
      • Bacterial pathogens
  10. Effects of Subchronic Copper Poisoning on Cecal Histology and Its Microflora in Chickens

    • Frontiers in Microbiology
    • Copper (Cu) is an important trace element with a two-sided effect on the growth performance of animals, which depends on the timing and dosage of Cu addition, etc. The purpose of this study was to determine the effects of oral copper sulfate (CuSO4, 350 ppm) on growth performance, cecal morphology, and its microflora of chickens (n = 60) after 30, 60, and 90 days.

      • Staphylococcus aureus
      • Bacterial pathogens
  11. Characterization of Shiga Toxin 2a Encoding Bacteriophages Isolated From High-Virulent O145:H25 Shiga Toxin-Producing Escherichia coli

    • Frontiers in Microbiology
    • Shiga toxin-producing Escherichia coli (STEC) may cause severe disease mainly due to the ability to produce Shiga toxins (Stx) encoded on bacteriophages. In Norway, more than 30% of the reported cases with STEC O145:H25 develop hemolytic uremic syndrome (HUS), and most cases, with known travel history, acquired the infection domestically.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  12. The Development of Ovine Gastric and Intestinal Organoids for Studying Ruminant Host-Pathogen Interactions

    • Frontiers in Cellular and Infection Microbiology
    • Gastrointestinal (GI) infections in sheep have significant implications for animal health, welfare and productivity, as well as being a source of zoonotic pathogens. Interactions between pathogens and epithelial cells at the mucosal surface play a key role in determining the outcome of GI infections; however, the inaccessibility of the GI tract in vivo significantly limits the ability to study such interactions in detail.

      • Salmonella
      • Bacterial pathogens
  13. Novel strains of Klebsiella africana and Klebsiella pneumoniae in Australian Fruit Bats (Pteropus poliocephalus)

    • Research in Microbiology
    • Author(s): Fiona K. McDougall, Kelly L. Wyres, Louise M. Judd, Wayne S.J. Boardman, Kathryn E. Holt, Michelle L. Power

      • Bacterial pathogens
  14. A study on fungal defensin against multidrug-resistant Clostridium perfringens and its treatment on infected poultry

    • Applied Microbiology and Biotechnology
    • Abstract

      • Clostridium perfringens
      • Bacterial pathogens
  15. Chitosan-chelated zinc modulates ileal microbiota, ileal microbial metabolites, and intestinal function in weaned piglets challenged with Escherichia coli K88

    • Applied Microbiology and Biotechnology

      • Shigella
      • Bacterial pathogens
  16. Exploring Klebsiella pneumoniae in Healthy Poultry Reveals High Genetic Diversity, Good Biofilm-Forming Abilities and Higher Prevalence in Turkeys Than Broilers

    • Frontiers in Microbiology
    • Klebsiella pneumoniae is a well-studied human pathogen for which antimicrobial resistant and hypervirulent clones have emerged globally. K. pneumoniae is also present in a variety of environmental niches, but currently there is a lack of knowledge on the occurrence and characteristics of K. pneumoniae from non-human sources. Certain environmental niches, e.g., animals, may be associated with high K.

      • Bacterial pathogens
  17. Multidrug-Resistant Lineage of Enterotoxigenic Escherichia coli ST182 With Serotype O169:H41 in Airline Waste

    • Frontiers in Microbiology
    • Enterotoxigenic Escherichia coli (ETEC) is the primary aetiologic agent of traveller’s diarrhoea and a significant cause of diarrhoeal disease and death in developing countries. ETEC O169:H41 strains are known to cause both traveller’s diarrhoea and foodborne outbreaks in developed countries and are cause for concern. Here, whole-genome sequencing (WGS) was used to assemble 46 O169:H41 (ST182) E.

      • Bacterial pathogens
  18. Short-Chain Inulin Modulates the Cecal Microbiota Structure of Leptin Knockout Mice in High-Fat Diet

    • Frontiers in Microbiology
    • The aim of this study was to explore the effect of short-chain inulin on cecal microbiota of high-fat diet-fed leptin knockout mice and the different influences of cecal microbiota on wild-type and leptin knockout mice. A total of 18 specific pathogen-free male C57BL/6J wild-type mice and 18 C57BL/6J leptin knockout mice (OB/OB mice) were selected.

      • Shigella
      • Bacterial pathogens
  19. Effects of 3% Boric Acid Solution on Cutaneous Candida albicans Infection and Microecological Flora Mice

    • Frontiers in Microbiology
    • To determine the effect of 3% boric acid solution on cutaneous infections with Candida albicans (CA) in mice and its effect on skin microflora. Female mice were divided into three groups, with 18 mice in each group. Two injection sites were randomly selected, and 0.1 mL of CA mycelium suspension was injected into the epidermis and dermis of the back of mice. Group N was treated with sterile water for injection (SWFI).

      • Shigella
      • Staphylococcus aureus
      • Bacterial pathogens
  20. Shifting proteomes: limitations in using the BioID proximity labeling system to study SNARE protein trafficking during infection with intracellular pathogens

    • Pathogens and Disease
    • ABSTRACT We hypothesize that intracellular trafficking pathways are altered in chlamydial infected cells to maximize the ability of Chlamydia to scavenge nutrients while not overtly stressing the host cell. Previous data demonstrated the importance of two eukaryotic SNARE proteins, VAMP4 and syntaxin 10 (Stx10), in chlamydial growth and development. Although, the mechanism for these effects is still unknown.

      • Bacterial pathogens
  21. Inhibitory effect of modified atmosphere packaging on Escherichia coli O157:H7 in fresh-cut cucumbers (Cucumis sativus L.) and effectively maintain quality during storage

    • Food Chemistry
    • Author(s): Yeting Sun, Xiaoyan Zhao, Yue Ma, Hongyang Guan, Hao Liang, Dan Wang

      • Bacterial pathogens
  22. Comparison of ISO 6579–1, VIDAS Easy SLM, and SureFast® Salmonella ONE Real-time PCR, for Salmonella Detection in Different Groups of Foodstuffs

    • Food Analytical Methods
    • In the European Union (EU), Salmonella was the causative agent responsible for almost one in three (30.7%) of all foodborne outbreaks reported by member states during 2018, causing 11,581 cases of illness, which represented an increase of 20.6% compared to 2017.

      • Salmonella
      • Bacterial pathogens
  23. Prevalence, typing and antimicrobial resistance of Salmonella isolates from commercial shellfish in the North coast of Morocco

    • World Journal of Microbiology and Biotechnology
    • Salmonellosis is one of the most common foodborne illnesses in the world. The irrational use of antibiotics in medicine and in animal nutrition has greatly favored the emergence and spread of resistant strains of non-typhoid Salmonella. This study aims the determination of the prevalence of Salmonella in bivalve mollusks in Northern Morocco, as well as the molecular typing and antibiotic susceptibility testing of the strains isolated from positive samples.

      • Salmonella
      • Bacterial pathogens
  24. Examination of Australian backyard poultry for Salmonella, Campylobacter and Shigella spp., and related risk factors

    • Zoonoses and Public Health
    • Zoonoses and Public Health, EarlyView. Abstract

      • Campylobacter
      • Salmonella
      • Shigella
      • Bacterial pathogens
  25. Probiotic potential of commercial dairy-associated protective cultures: in vitro and in vivo protection against Listeria monocytogenes infection

    • Food Research International
    • Author(s): Sulaiman F. Aljasir, Dennis J. D'Amico

      • Listeria monocytogenes
      • Bacterial pathogens