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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 59

  1. Prevalence, main serovars and anti‐microbial resistance profiles of non‐typhoidal Salmonella in poultry samples from the Americas: A systematic review and meta‐analysis

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Volume 69, Issue 5, Page 2544-2558, September 2022. Poultry and poultry-derived products such as meat and eggs are among the main sources of non-typhoidal Salmonella (NTS) transmission to humans.

      • Bacterial pathogens
      • Salmonella
  2. A pilot study revealing host‐associated genetic signatures for source attribution of sporadic Campylobacter jejuni infection in Egypt

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Volume 69, Issue 4, Page 1847-1861, July 2022. Campylobacter jejuni (C. jejuni), is considered among the most common bacterial causes of human bacterial gastroenteritis worldwide. The epidemiology and the transmission dynamics of campylobacteriosis in Egypt remain poorly defined due to the limited use of high-resolution typing methods.

      • Bacterial pathogens
      • Campylobacter
  3. Molecular characterization of Vibrio cholerae O1 El Tor strains in Malaysia revealed genetically diverse variant lineages

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Volume 69, Issue 4, Page e693-e703, July 2022. Vibrio cholerae O1 El Tor variants have been the major causative agents of cholera worldwide since their emergence in the 2000s. Cholera remains endemic in some regions in Malaysia. Therefore, we aimed to investigate the genetic characteristics of the V.

      • Bacterial pathogens
      • Vibrio
  4. Prevalence and molecular characterization of foodborne and human‐derived Salmonella strains for resistance to critically important antibiotics

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. The primary goals of this cross-sectional study were to screen various food/water, and human samples for the presence of Salmonella species, and to assess the phenotypic and genetic relationship between resistances found in food and human Salmonella isolates to critically important antibiotics.

      • Bacterial pathogens
      • Salmonella
  5. Prevalence and characteristics of Campylobacter from the genital tract of primates and ruminants in Eastern China

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Campylobacter infection is an important cause of genital failure in ruminants in developed countries. Although historically Campylobacter fetus subspecies fetus has been the main cause of abortion in sheep, C. jejuni is also increasingly associated with sheep abortions.

      • Bacterial pathogens
      • Campylobacter
  6. Campylobacter Positivity and Public Health Risks in Live Bird Markets, Busia, Kenya. A Value Chain Analysis

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Live bird markets (LBMs) provide integral hubs for 95% of poultry produced for food. Surveillance systems in LBMs serving smallholder farmers in sub-saharan Africa are often non-functional and data about public health risks and emerging pathogens are lacking. Studies in Kenya have reported 29% – 44% Campylobacter-prevalence in poultry.

      • Bacterial pathogens
      • Campylobacter
  7. Survey of Staphylococcus aureus carriage by free‐living red deer (Cervus elaphus): evidence of human and domestic animal lineages

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Staphylococcus aureus is a pathogen that can affect multiple host species. Evidence of transmission between humans and animals and among different animal species has been reported in recent years. In this study, we investigated 284 free-living red deer (Cervus elaphus) in the Central Italian Alps to assess the prevalence and molecular characteristics of S.

      • Bacterial pathogens
      • Staphylococcus aureus
  8. Dissemination of antimicrobial resistant isolates of Salmonella spp. in wild boars and its relationship with management practices

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Antimicrobial resistance (AMR) is a global concern and controlling its spread is critical for the effectiveness of antibiotics. Members of the genus Salmonella are broadly distributed, and wild boar may play an important role in its circulation between peri-urban areas and the environment, due to its frequent interactions both with livestock or human garbage.

      • Bacterial pathogens
      • Salmonella
  9. Efficacy of bovine brucellosis vaccines: conceptions, challenges and meta‐analysis. Response to the Letter to the Editor concerning “Efficacy of Brucella abortus S19 and RB51 vaccine strains: A systematic review and meta‐analysis” by Blasco et al ...

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article.

      • Bacterial pathogens
  10. Brucella induces heme oxygenase‐1 expression to promote its infection

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Brucellosis is a zoonotic and contagious infectious disease caused by Brucella spp, which causes substantial economic losses to animal husbandry and leads to severe public health problems. Brucella have evolved multiple strategies to escape host immunity and survive within host cells. Elucidating the immune evasion strategies during Brucella infection will facilitate the control of brucellosis.

      • Bacterial pathogens
  11. Prevalence, main serovars and antimicrobial resistance profiles of Non‐typhoidal Salmonella in poultry samples from the Americas: A systematic review and meta‐analysis

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Poultry and poultry-derived products such as meat and eggs are among the main sources of non-typhoidal Salmonella (NTS) transmission to the human.

      • Salmonella
      • Bacterial pathogens
  12. Molecular characterization of Vibrio cholerae O1 El Tor strains in Malaysia revealed genetically diverse variant lineages

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Vibrio cholerae O1 El Tor variants have been the major causative agents of cholera worldwide since their emergence in the 2000s. Cholera remains endemic in some regions in Malaysia. Therefore, we aimed to investigate the genetic characteristics of the V. cholerae O1 El Tor strains associated with outbreaks and sporadic cases to elucidate the molecular evolution among the strains circulating in this region. A total of 45 V.

      • Vibrio
      • Bacterial pathogens
  13. Characterization and protective effects of lytic bacteriophage pAh6.2TG against a pathogenic multidrug‐resistant Aeromonas hydrophila in Nile tilapia (Oreochromis niloticus)

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Abstract

      • Bacterial pathogens
  14. Seroprevalence trend of human brucellosis and MLVA genotyping characteristics of Brucella melitensis in Shaanxi Province, China, during 2008–2020

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Abstract

      • Bacterial pathogens
  15. Belgian bulk tank milk surveillance program reveals the impact of a continuous vaccination protocol for small ruminants against Coxiella burnetii

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Abstract

      • Bacterial pathogens
  16. Efficacy of Brucella abortus S19 and RB51 vaccine strains: a systematic review and meta‐analysis

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Abstract

      • Bacterial pathogens
  17. A Pilot Study Revealing Host‐Associated Genetic Signatures for Source attribution of Sporadic Campylobacter jejuni Infection in Egypt

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Campylobacter jejuni (C. jejuni), is considered among the most common bacterial causes of human bacterial gastroenteritis worldwide. The epidemiology and the transmission dynamics of campylobacteriosis in Egypt remain poorly defined due to the limited use of high-resolution typing methods. In this pilot study, we evaluated the discriminatory power of multiple typing ‘gene-by-gene based’ techniques to characterize C.

      • Campylobacter
      • Bacterial pathogens
  18. Evaluation of three immunological assays to mitigate the risk of transboundary spread of Coxiella burnetii by alpacas

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Coxiella burnetii causes coxiellosis in animals and Q fever in humans, a potentially debilitating zoonotic disease commonly transmitted through domestic ruminants. To prevent transboundary spread of C. burnetii, animals may be tested prior to export. In alpacas, this process is complicated by the lack of scientific evidence for C.

      • Bacterial pathogens
  19. Characterization of Shiga Toxin‐Producing Escherichia coli Isolated From Cattle and Sheep in Xinjiang Province, China, Using Whole‐Genome Sequencing

    • Transboundary and Emerging Diseases
    • Shiga toxin‐producing Escherichia coli (STEC) is an important foodborne pathogen capable of causing severe gastrointestinal diseases in humans. Cattle and sheep are the natural reservoir hosts of STEC strains. Previously, we isolated 56 STEC strains from anal and carcass swab samples of cattle and sheep in farms and slaughterhouses.

      • Bacterial pathogens
  20. Fatal toxoplasmosis in wild European brown hares (Lepus europaeus) in tularemia endemic areas of the Czech Republic: poses risk of infection for humans?

    • Transboundary and Emerging Diseases
    • Toxoplasma gondii may cause fatal infection in European brown hares (Lepus europaeus). However, the role of this parasite in terms of mortality rate in tularemia endemic areas, amount of parasites in affected organs and circulating genotypes, are still unknown. In total, 36 hares (killed or found dead) were submitted for pathomorphological examination as a part of the national tularemia and brucellosis monitoring.

      • Toxoplasma gondii
      • Bacterial pathogens
      • Parasites
  21. Control of Brucella melitensis in endemic settings: a simulation study in the Nile Delta, Egypt

    • Transboundary and Emerging Diseases
    • Small ruminant brucellosis remains endemic in many low and middle‐income countries (LMICs), where it poses a major economic and public health burden. Lack of resources to support long‐term vaccination, inherent characteristics of small ruminant production systems such as mixing of different flocks for grazing and limitations of the vaccines currently available, which can induce abortion in pregnant animals, have all hindered the effectiveness of control programs.

      • Bacterial pathogens
  22. Can domestic pigeon be a potential carrier of zoonotic Salmonella?

    • Transboundary and Emerging Diseases
    • Salmonellosis is one of the most important bacterial diseases in pigeons. This study aimed to estimate the prevalence of Salmonella spp. in domestic pigeons (Columba livia f. domestica) in Poland, its antimicrobial susceptibility (both phenotypic and genotypic), and its capability for biofilm formation. The presence of selected virulence genes, nucleotide homology of selected genes, and susceptibility to bacteriophages were investigated as well.

      • Salmonella
      • Bacterial pathogens
  23. First detection and genetic characterization of porcine circovirus type 3 (PCV3) in Argentina and its association with reproductive failure

    • Transboundary and Emerging Diseases
    • Porcine circovirus type 3 (PCV3) is considered a new circovirus and since it first description has been widely reported in most of the swine‐producing countries. Multisystemic inflammation and reproductive failure are consistent and concerning issues associated with PCV3 infection. This report describes the clinical and pathological features of a chronic reproductive disorder in a swine herd in Argentina associated with the presence of PCV3.

      • Bacterial pathogens
  24. Feline tuberculosis caused by Mycobacterium bovis infection of domestic UK cats associated with feeding a commercial raw food diet

    • Transboundary and Emerging Diseases
    • Mycobacterium (M.) bovis can infect cats and is a demonstrated zoonosis. We describe an outbreak of M. bovis in pet cats across England and Scotland associated with feeding a commercial raw food diet. Forty‐seven cats presented with (pyo)granulomatous lesions, lymphadenopathy, pulmonary and/or alimentary disease over a one‐year period where M. bovis infection was suspected or definitively diagnosed, and the cats all consumed the same specific brand of commercial raw venison pet food.

      • Bacterial pathogens
  25. Spatial sero‐prevalence of brucellosis in small ruminants of India: Nationwide cross‐sectional study for the year 2017‐2018

    • Transboundary and Emerging Diseases
    • Brucellosis in small ruminants caused mainly due to Brucella melitensis is an important zoonotic disease characterized by abortion, retained placenta, infertility, orchitis, epididymitis, and rarely arthritis. Small ruminants are the main source of economy for the rural and marginally poor farmers and brucellosis is resulting in huge economic losses due to abortions and infertility and causing public health concern among the small ruminant keepers.

      • Bacterial pathogens