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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 28

  1. The European Union One Health 2022 Zoonoses Report

    • EFSA Journal
    • Abstract This report by the European Food Safety Authority and the European Centre for Disease Prevention and Control presents the results of the zoonoses monitoring and surveillance activities carried out in 2022 in 27 Member States (MSs), the United Kingdom (Northern Ireland) and 11 non‐MSs. Key statistics on zoonoses and zoonotic agents in humans, food, animals and feed are provided and interpreted historically.

      • Bacterial pathogens
      • Campylobacter
      • Listeria monocytogenes
      • Salmonella
      • Viruses
      • Norovirus
  2. Prioritization of vegetable-borne biological hazards in Argentina using a multicriteria decision analysis tool

    • Food Science and Technology International
    • Vegetables, especially those eaten raw, have been implicated in several foodborne disease outbreaks. Since multiple vegetable matrices and hazards are involved, risk managers have to prioritize those with the greatest impact on public health to design control strategies. In this study, a scientific-based risk ranking of foodborne pathogens transmitted by leafy green vegetables in Argentina was performed.

      • Bacterial pathogens
      • Campylobacter
      • Escherichia coli O157:H7
      • Salmonella
      • Shigella
      • Yersinia
      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
      • Toxoplasma gondii
      • Viruses
      • Hepatitis
      • Norovirus
  3. Enteric Illness Outbreaks Reported Through the National Outbreak Reporting System—United States, 2009–2019

    • Clinical Infectious Diseases
    • Background The National Outbreak Reporting System (NORS) captures data on foodborne, waterborne, and enteric illness outbreaks in the United States. This study describes enteric illness outbreaks reported during 11 years of surveillance. Methods We extracted finalized reports from NORS for outbreaks occurring during 2009–2019.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Shigella
      • Viruses
      • Norovirus
  4. Surveillance and characteristics of food-borne outbreaks in the Netherlands, 2006 to 2019

    • Eurosurveillance
    • Background A wide variety of pathogens can cause disease in humans via consumption of contaminated food.

      • Bacterial pathogens
      • Bacillus cereus
      • Campylobacter
      • Salmonella
      • Viruses
      • Norovirus
  5. AB5 Enterotoxin-Mediated Pathogenesis: Perspectives Gleaned from Shiga Toxins

    • Toxins
    • Foodborne diseases affect an estimated 600 million people worldwide annually, with the majority of these illnesses caused by Norovirus, Vibrio, Listeria, Campylobacter, Salmonella, and Escherichia coli. To elicit infections in humans, bacterial pathogens express a combination of virulence factors and toxins.

      • Bacterial pathogens
      • Campylobacter
      • Escherichia coli O157:H7
      • Salmonella
      • Vibrio
      • Viruses
      • Norovirus
  6. Improved diagnosis of gastrointestinal infections using a semi-automated multiplex real-time PCR for detection of enteropathogens

    • Microbiology
    • The identification of enteropathogens is critical for the clinical management of patients with suspected gastrointestinal infection. The FLOW multiplex PCR system (FMPS) is a semi-automated platform (FLOW System, Roche) for multiplex real-time PCR analysis.

      • Campylobacter
      • Norovirus
      • Salmonella
      • Shigella
      • Giardia lamblia
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
      • Viruses
  7. Differential impact of the COVID-19 pandemic on laboratory reporting of norovirus and Campylobacter in England: A modelling approach

    • PLOS ONE
    • by Nikola Ondrikova, Helen E. Clough, Amy Douglas, Miren Iturriza-Gomara, Lesley Larkin, Roberto Vivancos, John P. Harris, Nigel A. Cunliffe

      Background

      • Bacterial pathogens
      • Viruses
      • Campylobacter
      • Norovirus
  8. Diarrheal Pathogens Associated With Growth and Neurodevelopment

    • Clinical Infectious Diseases
    • Background Diarrheal pathogens have been associated with linear growth deficits. The effect of diarrheal pathogens on growth is likely due to inflammation, which also adversely affects neurodevelopment. We hypothesized that diarrheagenic pathogens would be negatively associated with both growth and neurodevelopment.

      • Campylobacter
      • Norovirus
      • Shigella
      • Bacterial pathogens
      • Viruses
  9. Consumer's practices and prevalence of Campylobacter, Salmonella and norovirus in kitchens from six European countries

    • International Journal of Food Microbiology
    • Author(s): Trond Møretrø, Christophe Nguyen-The, Pierrine Didier, Isabelle Maître, Tekla Izsó, Gyula Kasza, Silje E. Skuland, Maria João Cardoso, Vania B. Ferreira, Paula Teixeira, Daniela Borda, Loredana Dumitrascu, Corina Neagu, Anca Ioana Nicolau, Eduard Anfruns-Estrada, Mike Foden, Phil Voysey, Solveig Langsrud

      • Bacterial pathogens
      • Viruses
      • Campylobacter
      • Norovirus
      • Salmonella
  10. Research Paper:Attributing human foodborne diseases to food sources and water in Japan using analysis of outbreak surveillance data

    • Journal of Food Protection
    • In Japan, strategies for ensuring food safety have been developed without reliable scientific evidence on the relation between foodborne infections and foods. The aim of this research was to provide information on the proportions of foodborne diseases caused by seven major causative pathogens ( Campylobacte r spp., Salmonella spp., EHEC, V. parahaemolyticus , Clostridium perfringens , Staphylococcus aureus , and Norovirus) attributable to foods using analysis of outbreak surveillance data.

      • Produce Safety
      • Vibrio
      • Staphylococcus aureus
      • Bacterial pathogens
      • Campylobacter
      • Clostridium perfringens
      • Norovirus
      • Salmonella
      • Viruses
  11. Gut Microbiota Features Associated With Campylobacter Burden and Postnatal Linear Growth Deficits in a Peruvian Birth Cohort

    • Clinical Infectious Diseases
    • Background Campylobacter infection is associated with impaired growth of children, even in the absence of symptoms. To examine the underlying mechanisms, we evaluated associations between Campylobacter infection, linear growth, and fecal microbial community features in a prospective birth cohort of 271 children with a high burden of diarrhea and stunting in the Amazonian lowlands of Peru.

      • Giardia lamblia
      • Bacterial pathogens
      • Parasites
      • Viruses
      • Campylobacter
      • Norovirus
  12. Evaluation of a Gastrointestinal Pathogen Panel Immunoassay in Stool Testing of Patients with Suspected Clostridioides (Clostridium) difficile Infection

    • Journal of Clinical Microbiology
    • Clostridioides (Clostridium) difficile infection (CDI) is the most common causative pathogen of health care-associated gastrointestinal infections; however, due to the overlap of clinical symptoms with those of other causes of acute gastroenteritis, the selection of the most appropriate laboratory test is difficult. From April to October 2018, 640 stool samples requested for CDI testing were examined using the mariPOC CDI and Gastro test (ArcDia), which allows the detection of C.

      • Bacterial pathogens
      • Campylobacter
      • Norovirus
      • Viruses
  13. Strategy for Systematic Review of Observational Studies and Meta-Analysis Modelling of Risk Factors for Sporadic Foodborne Diseases

    • Microbial Risk Analysis
    • Publication date: Available online 23 July 2019

      Source: Microbial Risk Analysis

      Author(s): Ursula Gonzales-Barron, Anne Thébault, Pauline Kooh, Laurence Watier, Moez Sanaa, Vasco Cadavez

      • Campylobacter
      • Norovirus
      • Hepatitis
      • Giardia lamblia
      • Giardia lamblia
      • Bacterial pathogens
      • Parasites
      • Viruses
      • Campylobacter
      • Norovirus
      • Bacterial pathogens
      • Parasites
      • Viruses
      • Hepatitis
  14. Virulence-Related Genes and Coenteropathogens Associated with Clinical Outcomes of Enteropathogenic Escherichia coli Infections in Children from the Brazilian Semiarid Region: a Case-Control Study of Diarrhea [Bacteriology]

    • Journal of Clinical Microbiology
    • Enteropathogenic Escherichia coli (EPEC) is a major cause of diarrhea in children from developing countries and presents high genetic variability. We aimed to characterize the EPEC virulence-related gene (VRG) distribution and copathogens associated with diarrhea and nutrition-related outcomes in children from the low-income Brazilian semiarid region. A cross-sectional case-control study of diarrhea was conducted in 1,191 children aged 2 to 36 months from the northeast region of Brazil.

      • Campylobacter
      • Norovirus
      • Bacterial pathogens
      • Viruses
  15. Human health impact of non-potable reuse of distributed wastewater and greywater treated by membrane bioreactors

    • Microbial Risk Analysis
    • Publication date: Available online 1 February 2018

      Source: Microbial Risk Analysis

      Author(s): Mary E. Schoen, Michael A. Jahne, Jay Garland

      • Campylobacter
      • Norovirus
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Campylobacter
      • Parasites
      • Norovirus
      • Viruses
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
      • Viruses
  16. Contribution of the FilmArray® Gastrointestinal Panel in the laboratory diagnosis of gastroenteritis in a cohort of children: a two-year prospective study

    • International Journal of Medical Microbiology
    • Publication date: Available online 2 May 2018


      Author(s): Adriana Calderaro, Monica Martinelli, Mirko Buttrini, Sara Montecchini, Silvia Covan, Sabina Rossi, Francesca Ferraglia, Paolo Montagna, Federica Pinardi, Sandra Larini, Maria Cristina Arcangeletti, Maria Cristina Medici, Carlo Chezzi, Flora De Conto

      • Campylobacter
      • Norovirus
      • Yersinia
      • Shigella
      • Vibrio
      • Giardia lamblia
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
      • Viruses
  17. Rapid Molecular Detection of Gastrointestinal Pathogens and Its Role in Antimicrobial Stewardship [Epidemiology]

    • Journal of Clinical Microbiology
    • We aimed to detect the etiological agents of acute diarrhea by a molecular gastrointestinal pathogen test (MGPT) and to assess the impact of MGPT on antimicrobial stewardship programs (ASP). This is a prospective observational study and was conducted between 1 January 2015 and 30 June 2017. We included consequent patients who had acute diarrhea. At the end of 2015, we implemented ASP in acute diarrhea cases and compared the outcomes in the pre-ASP and post-ASP periods.

      • Bacterial pathogens
      • Viruses
      • Campylobacter
      • Norovirus
  18. Evaluation of a multiplex panel for the diagnosis of acute infectious diarrhea in immunocompromised hematologic patients

    • PLOS ONE
    • Izaskun Alejo-Cancho, Francesc Fernández Avilés, Alicia Capón, Cristina Rodríguez, Josep Barrachina, Pilar Salvador, Mª Eugenia Valls, Miriam J. Álvarez-Martínez, Yuliya Zboromyrska, Jordi Vila, Mª Ángeles Marcos

      Introduction

      • Campylobacter
      • Norovirus
      • Bacterial pathogens
      • Viruses
  19. Persistent Norovirus Contamination of Groundwater Supplies in Two Waterborne Outbreaks

    • Food and Environmental Virology
    • Abstract

      • Campylobacter
      • Clostridium perfringens
      • Norovirus
      • Bacterial pathogens
      • Viruses
  20. Risk-based enteric pathogen reduction targets for non-potable and direct potable use of roof runoff, stormwater, and greywater

    • Microbial Risk Analysis
    • Publication date: Available online 2 March 2017
      Source:Microbial Risk Analysis

      Author(s): Mary E. Schoen, Nicholas J. Ashbolt, Michael A. Jahne, Jay Garland

      • Cryptosporidium parvum
      • Campylobacter
      • Giardia lamblia
      • Norovirus
      • Parasites
      • Bacterial pathogens
      • Viruses
  21. Simulation of enteric pathogen concentrations in locally-collected greywater and wastewater for microbial risk assessments

    • Microbial Risk Analysis
    • Publication date: Available online 9 November 2016
      Source:Microbial Risk Analysis

      Author(s): Michael A. Jahne, Mary E. Schoen, Jay L. Garland, Nicholas J. Ashbolt

      • Cryptosporidium parvum
      • Giardia lamblia
      • Bacterial pathogens
      • Norovirus
      • Viruses
      • Parasites
      • Campylobacter
  22. Disease burden due to gastrointestinal pathogens in a wastewater system in Kampala, Uganda

    • Microbial Risk Analysis
    • Publication date: December 2016
      Source:Microbial Risk Analysis, Volume 4

      Author(s): Samuel Fuhrimann, Mirko S. Winkler, Michelle Stalder, Charles B. Niwagaba, Mohammed Babu, Narcis B. Kabatereine, Abdullah A. Halage, Jürg Utzinger, Guéladio Cissé, Maarten Nauta

      • Campylobacter
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Norovirus
      • Viruses
      • Parasites
  23. Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam [Bacteriology]

    • Journal of Clinical Microbiology
    • Diarrheal disease is a complex syndrome that remains a leading cause of global childhood morbidity and mortality. The diagnosis of enteric pathogens in a timely and precise manner is important for making treatment decisions and informing public health policy, but accurate diagnosis is a major challenge in industrializing countries. Multiplex molecular diagnostic techniques may represent a significant improvement over classical approaches.

      • Campylobacter
      • Norovirus
      • Shigella
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
      • Viruses
  24. A Probe-free Four-tube Real-Time PCR Assay for Simultaneous Detection of Twelve Enteric Viruses and Bacteria

    • Journal of Microbiological Methods
    • Publication date: Available online 3 September 2015

      Author(s): Chen Zhang, Peihua Niu, Yanying Hong, Ji Wang, Jingyun Zhang, Xuejun Ma

      • Campylobacter
      • Yersinia
      • Vibrio
      • Norovirus
      • Bacterial pathogens
      • Shigella
      • Viruses
  25. Sustainable street vended foods and food safety: a conceptual framework

    • International Journal of Food Safety, Nutrition and Public Health
    • Street vended foods are the vehicle of pathogens transmission resulting in foodborne diseases. The purpose of this paper is to propose a conceptual public health risks framework of consuming road vended foods based on detailed review of existing literature in developing countries.

      • Bacterial pathogens
      • Campylobacter
      • Norovirus
      • Shigella