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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 16 of 16

  1. Prioritization of vegetable-borne biological hazards in Argentina using a multicriteria decision analysis tool

    • Food Science and Technology International
    • Vegetables, especially those eaten raw, have been implicated in several foodborne disease outbreaks. Since multiple vegetable matrices and hazards are involved, risk managers have to prioritize those with the greatest impact on public health to design control strategies. In this study, a scientific-based risk ranking of foodborne pathogens transmitted by leafy green vegetables in Argentina was performed.

      • Bacterial pathogens
      • Campylobacter
      • Escherichia coli O157:H7
      • Salmonella
      • Shigella
      • Yersinia
      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
      • Toxoplasma gondii
      • Viruses
      • Hepatitis
      • Norovirus
  2. Improved diagnosis of gastrointestinal infections using a semi-automated multiplex real-time PCR for detection of enteropathogens

    • Microbiology
    • The identification of enteropathogens is critical for the clinical management of patients with suspected gastrointestinal infection. The FLOW multiplex PCR system (FMPS) is a semi-automated platform (FLOW System, Roche) for multiplex real-time PCR analysis.

      • Campylobacter
      • Norovirus
      • Salmonella
      • Shigella
      • Giardia lamblia
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
      • Viruses
  3. Modeling Enteropathy or Diarrhea with the Top Bacterial and Protozoal Pathogens: Differential Determinants of Outcomes

    • ACS Infectious Diseases
    • Developing effective therapeutics or preventive interventions for important health threats is greatly enhanced whenever accessible models can enable the assessment of clinically important outcomes. While no non-human model is ever perfect, inexpensive in vivo small animal models in such as mice are often of great help in assessing the relevant efficacy of potential interventions.

      • Campylobacter
      • Shigella
      • Giardia lamblia
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
  4. Gut Microbiota Features Associated With Campylobacter Burden and Postnatal Linear Growth Deficits in a Peruvian Birth Cohort

    • Clinical Infectious Diseases
    • Background Campylobacter infection is associated with impaired growth of children, even in the absence of symptoms. To examine the underlying mechanisms, we evaluated associations between Campylobacter infection, linear growth, and fecal microbial community features in a prospective birth cohort of 271 children with a high burden of diarrhea and stunting in the Amazonian lowlands of Peru.

      • Giardia lamblia
      • Bacterial pathogens
      • Parasites
      • Viruses
      • Campylobacter
      • Norovirus
  5. Molecular Hydrogen Metabolism: a Widespread Trait of Pathogenic Bacteria and Protists

    • Microbiology and Molecular Biology Reviews
    • Pathogenic microorganisms use various mechanisms to conserve energy in host tissues and environmental reservoirs. One widespread but often overlooked means of energy conservation is through the consumption or production of molecular hydrogen (H2). Here, we comprehensively review the distribution, biochemistry, and physiology of H2 metabolism in pathogens. Over 200 pathogens and pathobionts carry genes for hydrogenases, the enzymes responsible for H2 oxidation and/or production.

      • Giardia lamblia
      • Bacterial pathogens
      • Campylobacter
      • Clostridium perfringens
      • Salmonella
      • Parasites
  6. Strategy for Systematic Review of Observational Studies and Meta-Analysis Modelling of Risk Factors for Sporadic Foodborne Diseases

    • Microbial Risk Analysis
    • Publication date: Available online 23 July 2019

      Source: Microbial Risk Analysis

      Author(s): Ursula Gonzales-Barron, Anne Thébault, Pauline Kooh, Laurence Watier, Moez Sanaa, Vasco Cadavez

      • Campylobacter
      • Norovirus
      • Hepatitis
      • Giardia lamblia
      • Giardia lamblia
      • Bacterial pathogens
      • Parasites
      • Viruses
      • Campylobacter
      • Norovirus
      • Bacterial pathogens
      • Parasites
      • Viruses
      • Hepatitis
  7. Contribution of the FilmArray® Gastrointestinal Panel in the laboratory diagnosis of gastroenteritis in a cohort of children: a two-year prospective study

    • International Journal of Medical Microbiology
    • Publication date: Available online 2 May 2018


      Author(s): Adriana Calderaro, Monica Martinelli, Mirko Buttrini, Sara Montecchini, Silvia Covan, Sabina Rossi, Francesca Ferraglia, Paolo Montagna, Federica Pinardi, Sandra Larini, Maria Cristina Arcangeletti, Maria Cristina Medici, Carlo Chezzi, Flora De Conto

      • Campylobacter
      • Norovirus
      • Yersinia
      • Shigella
      • Vibrio
      • Giardia lamblia
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
      • Viruses
  8. Risk-based enteric pathogen reduction targets for non-potable and direct potable use of roof runoff, stormwater, and greywater

    • Microbial Risk Analysis
    • Publication date: Available online 2 March 2017
      Source:Microbial Risk Analysis

      Author(s): Mary E. Schoen, Nicholas J. Ashbolt, Michael A. Jahne, Jay Garland

      • Cryptosporidium parvum
      • Campylobacter
      • Giardia lamblia
      • Norovirus
      • Parasites
      • Bacterial pathogens
      • Viruses
  9. Simulation of enteric pathogen concentrations in locally-collected greywater and wastewater for microbial risk assessments

    • Microbial Risk Analysis
    • Publication date: Available online 9 November 2016
      Source:Microbial Risk Analysis

      Author(s): Michael A. Jahne, Mary E. Schoen, Jay L. Garland, Nicholas J. Ashbolt

      • Cryptosporidium parvum
      • Giardia lamblia
      • Bacterial pathogens
      • Norovirus
      • Viruses
      • Parasites
      • Campylobacter
  10. Enteropathogen infections in canine puppies: (Co-)occurrence, clinical relevance and risk factors

    • Veterinary Microbiology
    • Publication date: 15 November 2016
      , Volume 195

      Author(s): Mirjam Duijvestijn, Lapo Mughini-Gras, Nancy Schuurman, Wim Schijf, Jaap A. Wagenaar, Herman Egberink

      • Giardia lamblia
      • Bacterial pathogens
      • Parasites
      • Campylobacter
      • Clostridium perfringens
  11. Detection of Zoonotic Enteropathogens in Children and Domestic Animals in a Semirural Community in Ecuador [Public and Environmental Health Microbiology]

    • Applied and Environmental Microbiology
    • Animals are important reservoirs of zoonotic enteropathogens, and transmission to humans occurs more frequently in low- and middle-income countries (LMICs), where small-scale livestock production is common. In this study, we investigated the presence of zoonotic enteropathogens in stool samples from 64 asymptomatic children and 203 domestic animals of 62 households in a semirural community in Ecuador between June and August 2014.

      • Campylobacter
      • Yersinia
      • Giardia lamblia
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
  12. One Health in Practice: A Pilot Project for Integrated Care of Zoonotic Infections in Immunocompromised Children and Their Pets in Chile

    • Zoonoses and Public Health
    • Summary

      • Campylobacter
      • Giardia lamblia
      • Bacterial pathogens
      • Parasites
  13. Molecular Detection of Legionella spp. and their associations with Mycobacterium spp., Pseudomonas aeruginosa and amoeba hosts in a drinking water distribution system

    • Journal of Applied Microbiology
    • Abstract

      Aims

      This study investigated waterborne opportunistic pathogens (OPs) including potential hosts, and evaluated the use of Legionella spp. for indicating microbial water quality for OPs within a full-scale operating drinking water distribution system (DWDS).

      • Campylobacter
      • Giardia lamblia
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
  14. Pathogen Loading From Canada Geese Faeces in Freshwater: Potential Risks to Human Health Through Recreational Water Exposure

    • Zoonoses and Public Health
    • Canada geese (Branta canadensis) faeces have been shown to contain pathogenic protozoa and bacteria in numerous studies over the past 15 years. Further, increases in both the Canada geese populations and their ideal habitat requirements in the United States (US) translate to a greater presence of these human pathogens in public areas, such as recreational freshwater beaches.

      • Campylobacter
      • Listeria monocytogenes
      • Giardia lamblia
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
  15. Molecular Survey of Occurrence and Quantity of Legionella spp., Mycobacterium spp., Pseudomonas aeruginosa and Amoeba Hosts in Municipal Drinking Water Storage Tank Sediments

    • Journal of Applied Microbiology
    • Aim
      To examine the occurrence and quantity of potential pathogens and an indicator of microbial contamination in the sediments of municipal drinking water storage tanks (MDWSTs), given the absence of such data across the United States.

      • Bacterial pathogens
      • Giardia lamblia
      • Cryptosporidium parvum
      • Parasites
      • Campylobacter
  16. Aetiology of acute paediatric gastroenteritis in Bulgaria during summer months: prevalence of the viral infections [STANDARD]

    • Journal of Medical Microbiology
    • Paediatric acute gastroenteritis is a global public health problem.Comprehensive laboratory investigation for viral, bacterial and parasitic agents is helpful for improving management of acute gastroenteritis in health care settings and for monitoring and controlling the spread of these infections.Our study aimed to investigate the role of various pathogens in infantile diarrhoea in Bulgaria outside the classical winter epidemics of rotavirus and norovirus.Stool samples from 115 hospitalized

      • Giardia lamblia
      • Cryptosporidium parvum
      • Campylobacter
      • Norovirus
      • Shigella