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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 36

  1. Assessment of Lactobacillus rhamnosus mediated protection against arsenic-induced toxicity in zebrafish: a qPCR-based analysis of Firmicutes and Bacteroidetes groups and embryonic development

    • Archives of Microbiology
    • Arsenic poses a significant health risk worldwide, impacting the gut microbiota, reproductive health, and development. To address this issue, a cost-effective method like probiotic supplementation could be beneficial. However, the interplay between arsenic toxicity, probiotics, gut microbiota, and maternal transcript modulation remains unexplored. This study investigates the impact of Lactobacillus rhamnosus (L.

      • Chemical contaminants
      • Heavy Metals
  2. Characterization of pumilacidin, a lipopeptide biosurfactant produced from Bacillus pumilus NITDID1 and its prospect in bioremediation of hazardous pollutants

    • Archives of Microbiology
    • Highly hydrophobic compounds like petroleum and their byproducts, once released into the environment, can persist indefinitely by virtue of their ability to resist microbial degradation, ultimately paving the path to severe environmental pollution. Likewise, the accumulation of toxic heavy metals like lead, cadmium, chromium, etc., in the surroundings poses an alarming threat to various living organisms.

      • Chemical contaminants
      • Heavy Metals
  3. Bioprospecting acid- and arsenic-tolerant plant growth-promoting rhizobacteria for mitigation of arsenic toxicity in acidic agricultural soils

    • Archives of Microbiology
    • Widespread use of chemical fertilizers and falling productivity in traditional agricultural practices has led to the biodiversity hotspot of North-Eastern region of India to face imminent threat to soil nutrients and biodiversity. The present work aimed to isolate rhizobacteria from Oryza sativa L.

      • Chemical contaminants
      • Heavy Metals
  4. Farm to table: colistin resistance hitchhiking through food

    • Archives of Microbiology
    • Colistin is a high priority, last-resort antibiotic recklessly used in livestock and poultry farms. It is used as an antibiotic for treating multi-drug resistant Gram-negative bacterial infections as well as a growth promoter in poultry and animal farms. The sub-therapeutic doses of colistin exert a selection pressure on bacteria leading to the emergence of colistin resistance in the environment.

      • Chemical contaminants
      • Antibiotic residues
  5. Insights on strain 115 plant growth-promoting bacteria traits and its contribution in lead stress alleviation in pea (Pisum sativum L.) plants

    • Archives of Microbiology
    • The present study aims to characterize the plant growth-promoting bacterial traits of Bacillus simplex (strain 115). This bacterium was inoculated in hydroponically conditions to improve pea (Pisum sativum L.) growth submitted to lead (Pb) toxicity. Root nodulation system was developed enough in 23-day-old plants attesting the interaction between the two organisms.

      • Chemical contaminants
      • Heavy Metals
  6. The involvement of organic acids in soil fertility, plant health and environment sustainability

    • Archives of Microbiology
    • Increasing demand for safe food by an ever-growing human population emphasizes the urgency for increasing crop yields and reducing the losses caused by abiotic and biotic stresses; a partial solution to this problem is to develop a better understanding of plant–microbe interactions. Plant roots continuously release a wide range of compounds including organic acids in root exudates.

      • Chemical contaminants
      • Pesticide residues
  7. Divulging the anti-acetylcholinesterase activity of Colletotrichum lentis strain KU1 extract as sustainable AChE active site inhibitors

    • Archives of Microbiology
    • Alzheimer’s disease (AD), also called senile dementia is a neurodegenerative disease seen commonly in the elderly and is characterised by the formation of β-amyloid plaques and neurofibrillary tangles (NFT). Though a complete understanding of the disease is lacking, recent studies showed the role of the enzyme acetylcholinesterase (AChE) in pathogenesis. Finding new lead compounds from natural sources has always been a quest for researchers.

      • Chemical contaminants
      • Heavy Metals
  8. Biosorption of lead by a soil isolate Aspergillus neoalliaceus

    • Archives of Microbiology
    • This study focused on Pb (II) elimination from aqueous solutions using fungal soil isolate which is identified as Aspergillus neoalliaceus. The sorption of lead with fungal mass studies was performed as a function of pH, biomass dose, contact time, and initial dye concentration. The solution pH value strongly affected the sorption of lead fungal mass.

      • Chemical contaminants
      • Heavy Metals
  9. Degradability of commercial mixtures of polychlorobiphenyls by three Rhodococcus strains

    • Archives of Microbiology
    • Biodegradative characteristics were investigated for the commercially available mixtures of polychlorinated biphenyls (PCBs) Trikhlorbifenil and Sovol degraded by the Rhodococcus wratislaviensis КT112-7, Rhodococcus wratislaviensis CH628 and Rhodococcus ruber P25 strains isolated from the natural habitats.

      • Chemical contaminants
      • Dioxins
  10. An investigation on lead removal with newly isolated Backusella circina

    • Archives of Microbiology
    • In this study, the Pb(II) biosorption performance of newly isolated fungal strain, used as a biosorbent, was analyzed. Fungal strain was identified as Backusella circina according to the internal transcribed spacer (ITS) region. Following Pb(II) biosorption, Fourier-transform infrared spectroscopy was performed to compare pristine and Pb(II) biosorped biomass.

      • Chemical contaminants
      • Heavy Metals
  11. The endophyte Stenotrophomonas maltophilia EPS modulates endogenous antioxidant defense in safflower (Carthamus tinctorius L.) under cadmium stress

    • Archives of Microbiology
    • Cadmium (Cd) pollution in agricultural soils induces oxidative stress in plants that in turn is the foremost limiting factor for agricultural productivity. In past few decades, plant–metal–microbe interaction is of great interest as an emerging environmentally friendly technology that can be exploited to alleviate metal stress in plants. Considering these, in the present study an endophytic bacterium strain EPS has been isolated from the roots of common bean.

      • Chemical contaminants
      • Heavy Metals
  12. Endofungal Rhizobium species enhance arsenic tolerance in colonized host plant under arsenic stress

    • Archives of Microbiology
    • Arsenic (As) is a toxic metalloid that is present in natural surroundings in many forms with severe consequences to sustainable agriculture and human health. Plant growth-promoting Rhizobia have been found involved in the induction of plant tolerance under various biotic and abiotic stresses.

      • Chemical contaminants
      • Heavy Metals
  13. Fungal community diversity of heavy metal contaminated soils revealed by metagenomics

    • Archives of Microbiology
    • The inappropriate disposal of toxic compounds generated by industrial activity has been impacting the environment considerably. Microbial communities inhabiting contaminated sites may represent interesting ecological alternatives for the decontamination of environments. The present work aimed to investigate the fungal diversity and its functionality contained in stream sediments with industrial waste contaminated with heavy metals by using metagenomic approach.

      • Chemical contaminants
      • Heavy Metals
  14. Effects of heavy metals on growth and biofilm-producing abilities of Salmonella enterica isolated from Tunisia

    • Archives of Microbiology
    • This study aims to test the toxicity of some metallic elements on Salmonella enterica strains and their power to grow and to develop a biofilm to overcome this environmental stress. From 50 selected strains of Salmonella, 70% belong to the Kentucky serotypes that is the most frequent one, followed by the other serotypes such as Amsterdam 6%, anatum 4%, derby 4% Enteritidis 4%, Zanzibar 4%, typhyrimium 2%, gallinaruim 2%, inbondaka 2% and Newport 2%.

      • Bacterial pathogens
      • Salmonella
      • Chemical contaminants
      • Heavy Metals
  15. Isolation and molecular identification of native As-resistant bacteria: As(III) and As(V) removal capacity and possible mechanism of detoxification

    • Archives of Microbiology
    • The study of arsenic (As)-resistant microorganisms with high As removal capacity is fundamental for the development of economically sustainable technologies used for the treatment of water contaminated with metalloid. In the current study, four bacterial strains were isolated from As-contaminated water samples of the Xichu region, Mexico.

      • Chemical contaminants
      • Heavy Metals
  16. Heavy metal-induced oxidative stress and alteration in secretory proteins in yeast isolates

    • Archives of Microbiology
    • In the recent years, yeasts have evolved as potent bioremediative candidates for the detoxification of xenobiotic compounds found in the natural environment. Candida sp. are well-studied apart from Saccharomyces sp. in heavy metal detoxification mechanisms. In the current study, Candida parapsilosis strain ODBG2, Candida sp.

      • Chemical contaminants
      • Heavy Metals
  17. Microbacterium sulfonylureivorans sp. nov., isolated from sulfonylurea herbicides degrading consortium

    • Archives of Microbiology
    • A novel Gram-stain positive, aerobic, motile, rod-shaped bacterium, designated strain LAM7116T was isolated from a sulfonylurea herbicides degrading consortium enriched with birch forest soil from Xinjiang.

      • Chemical contaminants
      • Pesticide residues
  18. Ecological performance of multifunctional pesticide tolerant strains of Mesorhizobium sp. in chickpea with recommended pendimethalin, ready-mix of pendimethalin and imazethpyr, carbendazim and chlorpyrifos application

    • Archives of Microbiology
    • The present study was designed to screen the Mesorhizobium strains (50) for tolerance with four recommended pesticides in chickpea. In-vitro, robust pesticide tolerant strains were developed in pesticides amended media over several generations. Further, verification of the multifunctional traits of pesticide tolerant mesorhizobia under pesticide stress was conducted in-vitro.

      • Chemical contaminants
      • Pesticide residues
  19. Metagenomic landscape of taxonomy, metabolic potential and resistome of Sardinella longiceps gut microbiome

    • Archives of Microbiology
    • Fish gut microbiota, encompassing a colossal reserve of microbes represents a dynamic ecosystem, influenced by a myriad of environmental and host factors. The current study presents a comprehensive insight into Sardinella longiceps gut microbiome using whole metagenome shotgun sequencing. Taxonomic profiling identified the predominance of phylum Proteobacteria, comprising of Photobacterium, Vibrio and Shewanella sp.

      • Vibrio
      • Heavy Metals
      • Bacterial pathogens
      • Chemical contaminants
  20. Effects of heavy metals on bacterial community structures in two lead–zinc tailings situated in northwestern China

    • Archives of Microbiology
    • We evaluated the variations of bacterial communities in six heavy metal contaminated soils sampled from Yanzi Bian (YZB) and Shanping Cun (SPC) tailings located in northwestern China. Statistical analysis showed that both the heavy metals and soil chemical properties could affect the structure and diversity of the bacterial communities in the tailing soils.

      • Heavy Metals
      • Chemical contaminants
  21. Evaluation of antimicrobial activity of the extract of Streptomyces euryhalinus isolated from the Indian Sundarbans

    • Archives of Microbiology
    • The discovery of new antimicrobials is the prime target in the fight against antimicrobial resistance. The continuous search for new lead compounds from bacteria of untapped and extreme ecosystems such as mangroves is currently being undertaken. This study describes the metabolite profiling of the Streptomyces euryhalinus culture extract. Previously, Streptomyces euryhalinus was isolated from the mangrove forest of Indian Sundarbans as a novel microorganism.

      • Heavy Metals
      • Chemical contaminants
  22. Effect of pyrene and phenanthrene in shaping bacterial communities in seagrass meadows sediments

    • Archives of Microbiology
    • Polycyclic aromatic hydrocarbons (PAHs), originating from anthropogenic and natural sources, are highly concerned environmental pollutants. This study investigated the impact of two model PAHs (pyrene and phenanthrene) on bacterial community succession in the seagrass meadows sediment in a lab-scale microcosm. Halophila ovalis sediment slurry microcosms were established, one group was placed as a control, and the other two were treated with pyrene and phenanthrene.

      • Chemical contaminants
  23. Antibacterial Mechanism of Liangguoan against Staphylococcus aureus and Escherichia coli

    • Archives of Microbiology
    • This study examined the antibacterial activity of the biological pesticide Liangguoan against Staphylococcus aureus and Escherichia coli as a potential replacement for chemical pesticide use in the fruit and vegetable industry. We measured the minimum inhibitory concentration and observed the changes in bacterial morphology, mortality, conductivity, nucleic acid content, and ATP content in response to the bactericide.

      • Staphylococcus aureus
      • Pesticide residues
      • Bacterial pathogens
      • Chemical contaminants
  24. Diversity of rhizobia and non-rhizobia endophytes isolated from root nodules of Trifolium sp. growing in lead and zinc mine site Guelma, Algeria

    • Archives of Microbiology
    • High concentrations of heavy metals in mine soil disturb the interactions between legumes and microorganisms leading to select strains adapted to these specific conditions. In this work, we analyzed the diversity of fifty strains isolated from Trifolium sp. nodules growing on Pb–Zn mine soil, in the Northeastern of Algeria and highlighted their potential symbiotic traits.

      • Staphylococcus aureus
      • Heavy Metals
      • Bacterial pathogens
      • Chemical contaminants
  25. Isolation and characterization of halophilic bacteria with the ability of heavy metal bioremediation and nanoparticle synthesis from Khara salt lake in Iran

    • Archives of Microbiology
    • Increasing environmental pollutants such as heavy metals have become one of the most severe health dangers because of rapid industrialization. Exposure to lead and nickel heavy toxic metals can lead to hazardous diseases affecting most of the organs in humans. Bioremediation is a process that uses the ability of microorganisms or plants to detoxify environmental contaminants at lower costs than physicochemical techniques.

      • Heavy Metals
      • Chemical contaminants