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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 61

  1. First identification and coinfection detection of Enterocytozoon bieneusi, Encephalitozoon spp., Cryptosporidium spp. and Giardia duodenalis in diarrheic pigs in Southwest China

    • BMC Microbiology
    • Background Enterocytozoon bieneusi, Encephalitozoon spp., Cryptosporidium spp., and Giardia duodenalis (G. intestinalis) are enteric pathogens that cause diarrhea in pigs. This study aimed to determine the prevalence of these enteric parasites and their coinfection with E.

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  2. Prevalence of Blastocystis and Dientamoeba fragilis in diarrheal patients in Corum, Türkiye

    • Parasitology Research
    • To investigate the prevalence of Blastocystis and Dientamoeba fragilis in diarrhea patients and healthy individuals in Corum, Türkiye, fecal samples from 92 diarrhea patients and 50 healthy individuals were collected and evaluated using direct microscopy and molecular methods to screen for bacteria, protozoa, and viruses. The prevalence of Blastocystis was 24.6% in total and more frequent in the healthy group (30.0%).

      • Bacterial pathogens
      • Salmonella
      • Shigella
      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  3. Prioritization of vegetable-borne biological hazards in Argentina using a multicriteria decision analysis tool

    • Food Science and Technology International
    • Vegetables, especially those eaten raw, have been implicated in several foodborne disease outbreaks. Since multiple vegetable matrices and hazards are involved, risk managers have to prioritize those with the greatest impact on public health to design control strategies. In this study, a scientific-based risk ranking of foodborne pathogens transmitted by leafy green vegetables in Argentina was performed.

      • Bacterial pathogens
      • Campylobacter
      • Escherichia coli O157:H7
      • Salmonella
      • Shigella
      • Yersinia
      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
      • Toxoplasma gondii
      • Viruses
      • Hepatitis
      • Norovirus
  4. Health risks of Cryptosporidium and Giardia in the application of surface water and septic tank effluent in Chinese agriculture: Impact on cancer patients identified by quantitative microbial risk assessment

    • Food Microbiology
    • The protozoa Cryptosporidium and Giardia are major causes of diarrhea and are commonly found on vegetables in China. They pose a health risk, particularly to immunocompromised individuals, including cancer patients.

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  5. Occurrence of Giardia and Cryptosporidium in effluents of urban wastewater treatment plants: A global systematic review and meta-analysis

    • Journal of Cleaner Production
    • Giardia and Cryptosporidium the important causative agents of intestinal parasitic diseases (IPD) are ubiquitously distributed in the environment, especially in wastewater and reclaimed water. Due to the water shortage crisis and extensive utilization of reclaimed water, the presence of these parasitic protozoa in wastewater is a concern from the public and environmental health point of view.

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  6. Seasonal and Spatial Variations in the Presence of Giardia and Cryptosporidium in Rural Drinking Water Supply Systems in Different Municipalities of Antioquia, Colombia

    • Water, Air, & Soil Pollution
    • This study evaluated the seasonal and spatial variations in the presence of Giardia and Cryptosporidium in rural drinking water supply systems of different municipalities of Antioquia. The municipalities evaluated were Envigado, Caldas, Sabaneta, La Estrella, Itagüi, Bello, Barbosa, Copacabana, and Girardota, located in the department of Antioquia, Colombia.

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  7. Survey of the occurrence of Giardia duodenalis cysts and Cryptosporidium spp. oocysts in green leafy vegetables marketed in the city of Valencia (Spain)

    • International Journal of Food Microbiology
    • The role of vegetables usually consumed without prior culinary treatment is known to contribute to the prevalence of foodborne diseases. Cysts and oocysts can contaminate food, which can then be the source of infection in humans. The aim of the study was to assess the occurrence of Giardia duodenalis and Cryptosporidium spp.

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  8. First Characterization and Zoonotic Potential of Cryptosporidium spp. and Giardia duodenalis in Pigs in Hubei Province of China

    • Frontiers in Cellular and Infection Microbiology
    • The zoonotic protozoa parasites Cryptosporidium spp. and Giardia duodenalis infect a wide range of hosts, including humans. Pigs are reservoir hosts for Cryptosporidium spp. and G. duodenalis, which can transmit cryptosporidiosis and giardiasis to humans and other animals. The current study sought to investigate the infection rates and species/genotypes of Cryptosporidium spp. and G. duodenalis in pigs in Hubei of China.

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  9. Humans and Hoofed Livestock Are the Main Sources of Fecal Contamination of Rivers Used for Crop Irrigation: A Microbial Source Tracking Approach

    • Frontiers in Microbiology
    • Freshwater bodies receive waste, feces, and fecal microorganisms from agricultural, urban, and natural activities. In this study, the probable sources of fecal contamination were determined. Also, antibiotic resistant bacteria (ARB) were detected in the two main rivers of central Chile. Surface water samples were collected from 12 sampling sites in the Maipo (n = 8) and Maule Rivers (n = 4) every 3 months, from August 2017 until April 2019.

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  10. Machine Learning and Its Applications for Protozoal Pathogens and Protozoal Infectious Diseases

    • Frontiers in Cellular and Infection Microbiology
    • In recent years, massive attention has been attracted to the development and application of machine learning (ML) in the field of infectious diseases, not only serving as a catalyst for academic studies but also as a key means of detecting pathogenic microorganisms, implementing public health surveillance, exploring host-pathogen interactions, discovering drug and vaccine candidates, and so forth.

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
      • Toxoplasma gondii
  11. An Overview of Mucosa-Associated Protozoa: Challenges in Chemotherapy and Future Perspectives

    • Frontiers in Cellular and Infection Microbiology
    • Parasitic infections caused by protozoans that infect the mucosal surfaces are widely neglected worldwide. Collectively, Entamoeba histolytica, Giardia lamblia, Cryptosporidium spp. and Trichomonas vaginalis infect more than a billion people in the world, being a public health problem mainly in developing countries. However, the exact incidence and prevalence data depend on the population examined.

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  12. Disease burden from simultaneous exposure of Cryptosporidium sp. and Giardia sp. and land use vulnerability assessment in a Costa Rican drinking water system.

    • Microbial Risk Analysis
    • Human and animal feces are one of the main pollutants in drinking water systems (DWS). Both sources of fecal pollution are related to environmental conditions, such as poor land use management and little micro-basin protection. Cryptosporidium sp. and Giardia sp. are zoonotic protozoan water and foodborne transmitted parasitic pathogens and a frequent cause of diarrhea in children in low- and middle-income countries.

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  13. Ready-to-eat salads and berry fruits purchased in Italy contaminated by Cryptosporidium spp., Giardia duodenalis, and Entamoeba histolytica

    • International Journal of Food Microbiology
    • Ready-to-eat (RTE) salads and berries are increasingly consumed in industrialized countries. These products can be contaminated by pathogenic parasites that have been responsible for foodborne outbreaks worldwide. In Italy, there are few data on contamination of RTE salads and berries with parasite transmission stages and this requires more-in-depth investigations.

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  14. Molecular characterization of Cryptosporidium spp. and Giardia duodenalis in pet dogs in Xinjiang, China

    • Parasitology Research
    • Cryptosporidium spp. and Giardia duodenalis are opportunistic zoonotic protozoa transmitted through several routes. In this study, a total of 604 fecal samples were collected from pet dogs in Xinjiang, China to detect the presence of Cryptosporidium spp. and G. duodenalis by PCR amplification of the small subunit (SSU) rRNA gene. The incidence rate of Cryptosporidium spp. or G. duodenalis was 5.3% (32/604).

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  15. A review of the molecular epidemiology of Cryptosporidium spp. and Giardia duodenalis in the Middle East and North Africa (MENA) region

    • Infection, Genetics and Evolution
    • Cryptosporidium spp. and Giardia duodenalis are important protozoan parasites which are associated with diarrheal diseases in humans and animals worldwide. Relatively little is known about the molecular epidemiology of Cryptosporidium spp. and Giardia duodenalis in the Middle East Countries and North Africa (MENA region).

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  16. Prevalence of intestinal parasitic infections and their associated risk factors among preschool and school children in Egypt

    • PLOS ONE
    • by Walid Elmonir, Haitham Elaadli, Anan Amer, Hammed El-Sharkawy, Mohamed Bessat, Samy F. Mahmoud, Mustafa Shukry Atta, Wael F. El-Tras

      • Giardia lamblia
      • Cryptosporidium parvum
      • Parasites
  17. Improved diagnosis of gastrointestinal infections using a semi-automated multiplex real-time PCR for detection of enteropathogens

    • Microbiology
    • The identification of enteropathogens is critical for the clinical management of patients with suspected gastrointestinal infection. The FLOW multiplex PCR system (FMPS) is a semi-automated platform (FLOW System, Roche) for multiplex real-time PCR analysis.

      • Campylobacter
      • Norovirus
      • Salmonella
      • Shigella
      • Giardia lamblia
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
      • Viruses
  18. Molecular detection of Cryptosporidium spp., Giardia duodenalis, and Enterocytozoon bieneusi in school children at the Thai-Myanmar border

    • Parasitology Research
    • Few data are available on the genetic identity of enteric protists Cryptosporidium spp., Giardia duodenalis, and Enterocytozoon bieneusi in humans in Thailand. In this study, 254 stool samples were collected from primary school children from Ratchaburi Province at the Thai-Myanmar border and examined for Cryptosporidium spp., G. duodenalis, E. bieneusi and Cyclospora cayetanensis using PCR techniques.

      • Giardia lamblia
      • Cryptosporidium parvum
      • Cyclospora cayetanensis
      • Parasites
  19. Modeling Enteropathy or Diarrhea with the Top Bacterial and Protozoal Pathogens: Differential Determinants of Outcomes

    • ACS Infectious Diseases
    • Developing effective therapeutics or preventive interventions for important health threats is greatly enhanced whenever accessible models can enable the assessment of clinically important outcomes. While no non-human model is ever perfect, inexpensive in vivo small animal models in such as mice are often of great help in assessing the relevant efficacy of potential interventions.

      • Campylobacter
      • Shigella
      • Giardia lamblia
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
  20. Establishment and preliminary application of nanoparticle-assisted PCR assay for detection of Cryptosporidium spp.

    • Parasitology Research
    • Cryptosporidium is an important intestinal protozoan parasite that causes diarrhoea in humans and animals. To rapidly and specifically detect Cryptosporidium spp., we designed a pair of primers based on the small subunit ribosomal RNA (SSU rRNA) gene of Cryptosporidium spp. to be used in a new nanoparticle-assisted PCR (nano-PCR) assay.

      • Parasites
      • Giardia lamblia
      • Cryptosporidium parvum
  21. Identification of Uncommon Cryptosporidiumviatorum (a Novel Subtype XVcA2G1c) and Cryptosporidium andersoni as Well as Common Giardia duodenalis Assemblages A and B in Humans in Myanmar

    • Frontiers in Cellular and Infection Microbiology
    • Cryptosporidium and Giardia are two important zoonotic intestinal protozoa responsible for diarrheal diseases in humans and animals worldwide. Feces from infected hosts, water and food contaminated by Cryptosporidium oocysts and Giardia cysts as well as predictors such as poverty have been involved in their transmission. Myanmar is one of the world’s most impoverished countries. To date, there are few epidemiological studies of Cryptosporidium and Giardia in humans.

      • Giardia lamblia
      • Cryptosporidium parvum
      • Parasites
  22. Intestinal protozoan and helminthic infections among hemodialysis and cancer patients

    • Parasitology Research
    • Intestinal parasitic infections (IPIs) can be a severe threat to immunocompromised patients. This is particularly true for those undergoing chemotherapy and hemodialysis. The present research is aimed at identifying intestinal parasites that might be present in immunocompromised patients. In this cross-sectional study 1040 stool samples were collected from March to September 2017.

      • Giardia lamblia
      • Cryptosporidium parvum
      • Parasites
  23. Identification of free‐living amoebas and amoeba‐resistant bacteria accumulated in Dreissena polymorpha.

    • Environmental Microbiology
    • To identify the free‐living amoeba (FLA) and amoeba resistant bacteria (ARB) accumulated in zebra mussels and in the water in which they are found, mussels were collected at two locations in the Ebro river basin (North East Spain). Free‐living amoebas and bacteria were isolated from mussel extracts and from natural water.

      • Giardia lamblia
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
      • Clostridium perfringens
      • Salmonella
  24. Identifying human enteric parasitic infections in Greece, with focus on Giardia and Cryptosporidium

    • Experimental Parasitology
    • Author(s): D. Kostopoulou, E. Claerebout, D. Arvanitis, P. Ligda, S. Casaert, S. Sotiraki

      • Giardia lamblia
      • Cryptosporidium parvum
      • Parasites
  25. Cryptosporidium and Giardia in locally harvested clams in Iqaluit, Nunavut

    • Zoonoses and Public Health
    • High prevalences of Cryptosporidium and Giardia were recently found in enteric illness patients in the Qikiqtaaluk region of Nunavut, Canada, with a foodborne, waterborne or animal source of parasites suspected. Clams (Mya truncata) are a commonly consumed, culturally important and nutritious country food in Iqaluit; however, shellfish may concentrate protozoan pathogens from contaminated waters.

      • Giardia lamblia
      • Cryptosporidium parvum
      • Parasites