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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 50

  1. 85 Evaluation of a Saccharomyces cerevisiae fermentation product on performance, plasma metabolites, rumen parameters, and fecal pathogen shedding in feedlot steers

    • Journal of Animal Science
    • The objective of the experiment was to evaluate a commercial Saccharomyces cerevisiae fermentation product (SCFP; NaturSafe, Dimond V, Cedar Rapids, IA) on performance, plasma metabolites, rumen parameters, and fecal pathogen shedding in feedlot steers. Crossbred steers (n = 61; 271 ± 48.1 kg) were sourced from 3 different research units at Oklahoma State University and assigned to 1 of 3 experimental treatments in a randomized complete block design.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
      • Salmonella
  2. 5 Farm-level management practices in forage-based beef cattle systems and their influence on sustainability

    • Journal of Animal Science
    • Sustainability is a ‘buzzword’ often used within and outside of the agriculture industry. Southeastern beef cow-calf and stocker operations often utilize management practices which embody the core definition of sustainability to improve land resource, economic, and social viability. In forage-based production systems, year-round management practices are generally viewed by the scientific community in terms of production and economic responses.

      • Chemical contaminants
      • Heavy Metals
  3. 50 Effects of cottonseed supplementation on the rumen microbiota of parasite-challenged meat goats

    • Journal of Animal Science
    • Cotton serves as a vital economic driver within the agricultural sector of Mississippi. The seeds of cotton are rich in fat and protein content, making them a cost-effective alternative to soybean meal and other expensive protein sources. Additionally, cottonseed is the primary source of gossypol, a phenolic compound with significant potential for natural parasite control.

      • Bacterial pathogens
      • Vibrio
  4. Effects of dietary Nisin on growth performance, immune function, and gut health of broilers challenged by Clostridium perfringens

    • Journal of Animal Science
    • Nisin (Ni) is a polypeptide bacteriocin produced by lactic streptococci (probiotics) that can inhibit the majority of gram-positive bacteria, and improve the growth performance of broilers, and exert antioxidative and anti-inflammatory properties. The present study investigated the potential preventive effect of Nisin on necrotic enteritis induced by Clostridium perfringens (Cp) challenge.

      • Bacterial pathogens
      • Clostridium perfringens
  5. 103 Development of a Novel, Experimental, Minimally Invasive Model to Investigate the Genesis and Etiology of Liver Abscesses in Cattle

    • Journal of Animal Science
    • Most research surrounding liver abscesses involves post-hoc evaluation of naturally occurring abscesses in production settings. Few studies have been designed to experimentally induce abscesses with the purpose of identifying a time course, causality, and associated physiological implications.

      • Bacterial pathogens
      • Salmonella
  6. 104 Development of an Experimental Model to Induce Liver Abscesses in Steers Using an Acidotic Diet Challenge and Oral Bacterial Inoculation

    • Journal of Animal Science
    • The objective of this study was to develop a model for liver abscesses (LA) in Holstein steers by using an acidotic diet or acidotic diet plus intraruminal inoculation of Fusobacterium necrophorum, Salmonella enterica serotype Lubbock, and Truperella pyogenes.

      • Bacterial pathogens
      • Salmonella
  7. 209 Prevalence of Antimicrobial Resistance Genes and Mobile Genetic Elements in the Swine Gut Microbiome

    • Journal of Animal Science
    • Antimicrobial resistance (AMR) is one of the most pressing threats to public health. It contributes to over a million deaths a year currently and by 2050 it is expected to cause more annual death than cancer. The swine industry has taken important steps to address the AMR crisis by phasing out the use of antimicrobial growth promoters.

      • Bacterial pathogens
      • Vibrio
  8. 221 Increasing Functional Amino Acid Ratios Does Not Improve Growth Performance in Pigs Raised Under Poor Sanitary Conditions When Fed with Individual Precision Feeding Or Conventional Feeding Systems

    • Journal of Animal Science
    • Immune system activation redirects dietary nutrients to defense mechanisms, thereby impairing growth performance of pigs. Supplementing pigs with functional amino acids (AA) such as Met, Thr and Trp was shown to support the immune system and reduce the negative effects on growth. However, pigs respond differently to immune stressors which increase herd variability.

      • Bacterial pathogens
      • Salmonella
  9. 380 The Sow Milk Microbiome and Resistome

    • Journal of Animal Science
    • In addition to oligosaccharides, proteins (e.g., immunoglobulins), lipids, vitamins, and other nutrients vital for piglet health, sow’s milk contains bacteria believed to be important in gut health. Therefore, certain sow milk isolates with potentially beneficial properties may be of interest for use as probiotic strains.

      • Bacterial pathogens
      • Clostridium perfringens
      • Staphylococcus aureus
  10. 322 Metabolic Pathway and Rumen Bacterial Taxa Associated with Divergent Residual Body Weight Gain Phenotypes in Beef Cattle

    • Journal of Animal Science
    • We applied metabolomics and 16S rRNA gene sequencing to determine the metabolic pathway and ruminal bacterial taxa associated with divergent residual body weight (BW) gain phenotype in crossbred beef steers. A group of 108 crossbred growing beef steers (average BW = 282.87 ± 30 kg) were fed a forage-based diet for a period of 56 d in a confinement dry lot equipped with GrowSafe intake nodes to determine their residual body weight gain (RADG) phenotype.

      • Bacterial pathogens
      • Vibrio
  11. PSXIII-20 The Effect of Hemp Varieties and Cannabidiol Concentrations on the in Vitro Ruminal Microbiome

    • Journal of Animal Science
    • This study aimed to evaluate the effect of hemp varieties and cannabidiol (CBD) concentrations on in vitro ruminal microbiota diversity and abundance relative do alfalfa (Medicago sativa). Two ruminally cannulated Angus steers were used as inoculum donors for in vitro incubation.

      • Bacterial pathogens
      • Vibrio
  12. 338 A Survey of Mycotoxin Occurrence in Us Corn and Corn By-Product Feed Ingredients from 2018 to 2022 Harvest Years

    • Journal of Animal Science
    • The aim of this survey was to compare the occurrence and contamination levels of six major mycotoxin categories found in corn and corn by-product feed ingredients harvested in the United States from 2018 through 2022. Mycotoxins are secondary fungal metabolites that can negatively impact animal health and performance and have been routinely found in a variety of feedstuffs including, but not limited to, cereal grains, by-products, silages, dry hays and pasture grasses.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  13. PSXIV-27 Liver Abscesses in Feedlot Cattle: Further Studies on Etiology and Pathogenesis Liver Abscesses in Feedlot Cattle: Further Studies on Etiology and Pathogenesis

    • Journal of Animal Science
    • Liver abscesses (LA) are a polymicrobial infection and the causative agents include two subspecies of Fusobacterium necrophorum, necrophorum and funduliforme, and Trueperella pyogenes. Nucleic acid-based analysis of the purulent material of LA has indicated that Proteobacteria and Bacteroidetes were the dominant phyla, next to phylum Fusobacteria. The sporadic isolations of bacterial species of the Proteobacteria and Bacteroidetes in LA have been reported.

      • Bacterial pathogens
      • Salmonella
  14. PSVI-7 Snorna Dysregulated Expression and Potential Roles in Bovine Sub-Clinical Mastitis Due to Staphylococcus Chromogenes

    • Journal of Animal Science
    • Staphylococcus chromogenes (SC), a frequent non-aureus staphylococcus on Canadian herds causes both clinical and subclinical forms of mastitis and contributes to large economic losses on Canadian farms. However, little research attention has been directed to uncovering the molecular mechanisms underlying SC mastitis pathogenesis, including the roles of small nucleolar RNAs (snoRNAs).

      • Bacterial pathogens
      • Staphylococcus aureus
  15. PSXI-9 Investigation to Characterize the Swine Gut Microbiota at Different Growth Stages Using 16s Rrna Gene High-Throughput Sequencing Data

    • Journal of Animal Science
    • The swine gut microbiota is populated by large and diverse bacterial community that play an essential role in pig intestinal development. Therefore, it is important to characterize the composition of swine gut microbiota and determine which factor shape the composition of the gut microbiota. Our objective was to characterize the swine gut microbiota at the different growth stages using 16S rRNA gene high-throughput sequencing data from gastrointestinal (GI) samples.

      • Bacterial pathogens
      • Shigella
  16. PSIII-28 A Novel Direct-Fed Microbial Supports in Vitro Intestinal Integrity Upon Clostridium Perfringens Challenge

    • Journal of Animal Science
    • Gastrointestinal pathogens cause productive, health, welfare, and financial losses to the beef cattle herd. Among these pathogens, Clostridium perfringens type A is of interest given its prevalence, negative effects on intestinal health, and subsequent losses caused in beef animals. Based on this rationale, we hypothesized that a novel direct-fed microbial (DFM) formulation would support the gut barrier integrity upon a challenge with C. perfringens type A.

      • Bacterial pathogens
      • Clostridium perfringens
  17. PSXI-22 Different Initial Body Weight and Dietary Supplementation of Tryptophan, Threonine, and Methionine on Feeding Behavior Index of Growing Pigs Under a Sanitary Challenge

    • Journal of Animal Science
    • Sanitary challenges (SC) can affect growth and revenue of pig production. The reduction in growth performance result from a decrease in daily feed intake (DFI). Besides, feeding behavior patterns may be also affected for pigs under SC. The extent of this impact might depend on the initial body weight (BW) of pigs. Additionally, supplementing tryptophan (Trp), threonine (Thr), and methionine (Met) above NRC requirements may attenuate inflammation and modulates DFI under SC.

      • Bacterial pathogens
      • Salmonella
  18. PSII-8 Comparison of Different Fattening Stages on Rumen Microbiota and Physiological Characteristics in Japanese Black Cattle

    • Journal of Animal Science
    • This study aimed to investigate the relationship between rumen microbiota and physiological characteristics in Japanese Black cattle during the fattening period, which are known for their distinctive physiological characteristics due to prominent intramuscular fat deposition. The experimental period was categorized into three stages: early (12 to 14 months of age; T1), middle (15 to 22 months; T2), and late fattening phases (23 to 30 months; T3).

      • Bacterial pathogens
      • Vibrio
  19. PSXIV-9 Effects of Dietary Restriction and One-Carbon Metabolite Supplementation During Early Gestation on the Maternal Gut and Vaginal Microbiota in Cattle

    • Journal of Animal Science
    • Maternal diet quality and quantity have significant impacts on both maternal and fetal health and development. The composition and function of the maternal gut microbiome is also significantly influenced by diet. However, little is known about the impact of gestational nutrient restriction on the maternal microbiome during early gestation, which is a critical stage for many developmental processes.

      • Bacterial pathogens
      • Vibrio
  20. 231 Efficacy of Mycotoxin Mitigation Product Containing Yeast Extract on Intestinal Health and Growth of Newly Weaned Pigs Under Chronic Dietary Challenges of Fumonisin and Aflatoxin

    • Journal of Animal Science
    • This study aimed to investigate the efficacy of mycotoxin mitigation product containing yeast extract on intestinal health and growth of newly weaned pigs under chronic dietary challenges of fumonisin and aflatoxin. Newly weaned pigs (n = 48; 21 days old; 6.4 ± 0.3 kg BW) were allotted to 4 treatments based on randomized complete block design with initial BW and sex as blocks and fed for 32 d in 3 phases (P1/2/3 for 11/11/10 days, respectively).

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  21. PSVI-8 Effects of Dietary Supplementation of Pediococcus Pentosaceus Strains Isolated from White Kimchi in Weaned Piglet Challenged with Escherichia Coli and Salmonella Typhimurium

    • Journal of Animal Science
    • Escherichia coli and Salmonella typhimurium infections in pigs are major source associated with enteric disease such as post-weaning diarrhea. Lactic acid bacteria, one of the most essential probiotics, can colonize the digestive tract and increase nutritional digestion and maintain the stability of the intestinal flora. The aim of this study was to investigate the effects of Pediococcus pentosaceus in weaned piglets challenged with pathogen bacteria.

      • Bacterial pathogens
      • Salmonella
  22. 203 Effects of Feeding Varying Levels of Mycotoxin-Containing Corn Fines on Diet Choice and Growth Performance of Nursery Pigs

    • Journal of Animal Science
    • Mycotoxins in feed are known to negatively affect growth and other physiological processes in pigs. Two experiments were conducted to investigate the effects of feeding diets with varying levels of mycotoxins and boron (a nutrient reported to mitigate some aspects of mycotoxicosis). Screenings from the 2020 crop year corn contained mycotoxin levels of 23,038 ppb total fumonisin, 1,446 ppb zearalenone, and 5,032 ppb total deoxynivalenol (DON)l.

      • Natural toxins
      • Mycotoxins
  23. 202 Evaluation of Increasing Levels of Mycotoxin-Containing Corn Fines fed to Nursery Pigs on Growth Performance

    • Journal of Animal Science
    • The effects of feeding corn fines (screenings) containing mycotoxin levels at greater than the FDA cautionary levels were evaluated using crossbred pigs [n = 150, 90 barrows and 60 gilts; mean initial body weight (BW) = 6.42 ± 0.06 kg; n =] that were blocked by BW and sex, randomly allotted within block to 6 dietary treatments, and housed 5 pigs/pen resulting in a total of 5 replicates.

      • Natural toxins
      • Mycotoxins
  24. 201 Transmission of Zearalenone, Deoxynivalenol and Their Metabolites from Sows to Piglets During Lactation with or without an Algae-Clay-Based Decontaminant

    • Journal of Animal Science
    • This study evaluated effects of an algae-clay-based mycotoxin decontaminant on levels of zearalenone (ZEN), deoxynivalenol (DON) and their derivatives in the colostrum, milk, and serum of sows, as well as in the serum of weaned piglets after maternal mycotoxin exposure from the last week of gestation to weaning (26 days).

      • Natural toxins
      • Mycotoxins
  25. PSI-14 Enteric Challenge Increases Amino Acids and Energetic Costs in Growing Pigs

    • Journal of Animal Science
    • Supplementing tryptophan (Trp), threonine (Thr), and methionine (Met) above the requirements might support immune system energetic and protein costs during a sanitary challenge. This study aimed to evaluate the correlation between protein deposition (PD) and immune response in challenged pigs.

      • Bacterial pathogens
      • Salmonella