An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 526 - 550 of 580

  1. Irrigation Is Significantly Associated with an Increased Prevalence of Listeria monocytogenes in Produce Production Environments in New York State

    • Journal of Food Protection
    • Weller, Daniel et al. Environmental (i.e., meteorological and landscape) factors and management practices can affect the prevalence of foodborne pathogens in produce production environments. This study was conducted to determine the prevalence of Listeria monocytogenes, Listeria species (including L.

      • Bacterial pathogens
      • Listeria monocytogenes
  2. Escherichia coli O157:H7 – Discerning Facts from Fiction: An Integrated Research and Extension Project for Multiple Audiences

    • Zoonoses and Public Health
    • The O157:H7 (EcO157) epidemiology of Shiga-toxin-producing Escherichia coli (STEC) in cattle is complex, and myths about pre-harvest control are perpetuated. The objectives of this project were to identify perpetuated misinformation and inform four audiences about evidence-based risks and pre-harvest control of EcO157 by addressing: (i) EcO157 epidemiology and pre-harvest control; (ii) how food safety policy is created; and (iii) how to present accurate information about EcO157.

  3. Prevalence of Enterohemorrhagic Escherichia coli O26, O45, O103, O111, O121, O145, and O157 on Hides and Preintervention Carcass Surfaces of Feedlot Cattle at Harvest

    • Foodborne Pathogens and Disease
    • Foodborne Pathogens and Disease , Vol. 0, No. 0.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  4. Feces of feedlot cattle contain a diversity of bacteriophages that lyse non-O157 Shiga toxin-producing Escherichia coli

    • Canadian Journal of Microbiology
    • e-First Articles.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  5. Microbiological analysis of pre-packed sweet basil (Ocimum basilicum) and coriander (Coriandrum sativum) leaves for the presence of Salmonella spp. and Shiga toxin-producing E. coli

    • International Journal of Food Microbiology
    • Publication date: 2 September 2015
      , Volume 208
      Author(s): Stefanie Delbeke , Siele Ceuppens , Liesbeth Jacxsens , Mieke Uyttendaele

      • Bacterial pathogens
      • Salmonella
      • Enterohemorrhagic Escherichia coli
  6. Public Health Investigation of Two Outbreaks of Shiga Toxin-Producing Escherichia coli O157 Associated with Consumption of Watercress [Public and Environmental Health Microbiology]

    • Applied and Environmental Microbiology
    • An increase in the number of cases of Shiga toxin-producing Escherichia coli (STEC) O157 phage type 2 (PT2) in England in September 2013 was epidemiologically linked to watercress consumption. Whole-genome sequencing (WGS) identified a phylogenetically related cluster of 22 cases (outbreak 1). The isolates comprising this cluster were not closely related to any other United Kingdom strain in the Public Health England WGS database, suggesting a possible imported source.

      • Bacterial pathogens
  7. Control of pathogens in biofilms on the surface of stainless steel by levulinic acid plus sodium dodecyl sulfate

    • International Journal of Food Microbiology
    • Publication date: 17 August 2015
      , Volume 207
      Author(s): Dong Chen , Tong Zhao , Michael P. Doyle

      • Listeria monocytogenes
      • Bacterial pathogens
  8. Genetically Marked Strains of Shiga Toxin–Producing O157:H7 and Non-O157 Escherichia coli: Tools for Detection and Modeling

    • Journal of Food Protection
    • Paoli, George C. et al. Shiga toxin–producing E. coli (STEC) is an important group of foodborne pathogens in the United States and worldwide. Nearly half of STEC-induced diarrheal disease in the United States is caused by serotype O157:H7, while non-O157 STEC account for the remaining illnesses. Thus, the U.S.

      • Bacterial pathogens
  9. Molecular Subtyping of Shiga Toxin–Producing Escherichia coli Using a Commercial Repetitive Sequence–Based PCR Assay

    • Journal of Food Protection
    • Anderson, Kimberly M. et al. PCR-based typing methods, such as repetitive sequence–based PCR (rep-PCR), may facilitate the identification of Shiga toxin–producing Escherichia coli (STEC) by serving as screening methods to reduce the number of isolates to be processed for further confirmation.

      • Bacterial pathogens
  10. Control of the Biofilms Formed by Curli- and Cellulose-Expressing Shiga Toxin–Producing Escherichia coli Using Treatments with Organic Acids and Commercial Sanitizers

    • Journal of Food Protection
    • Park, Yoen Ju et al. Biofilms are a mixture of bacteria and extracellular products secreted by bacterial cells and are of great concern to the food industry because they offer physical, mechanical, and biological protection to bacterial cells.

      • Bacterial pathogens
  11. Thermal Inactivation of Shiga Toxin–Producing Escherichia coli Cells within Cubed Beef Steaks following Cooking on a Griddle

    • Journal of Food Protection
    • Swartz, Richard S. et al. Thermal inactivation of Shiga toxin–producing Escherichia coli (STEC) cells within knitted/cubed beef steaks following cooking on a nonstick griddle was quantified. Both faces of each beef cutlet (ca. 64 g; ca. 8.5 cm length by 10.5 cm width by 0.75 cm height) were surface inoculated (ca.

      • Bacterial pathogens
  12. Diversity of Shiga Toxin-Producing Escherichia coli (STEC) O26:H11 Strains Examined via stx Subtypes and Insertion Sites of Stx and EspK Bacteriophages [Food Microbiology]

    • Applied and Environmental Microbiology
    • Shiga toxin-producing Escherichia coli (STEC) is a food-borne pathogen that may be responsible for severe human infections. Only a limited number of serotypes, including O26:H11, are involved in the majority of serious cases and outbreaks. The main virulence factors, Shiga toxins (Stx), are encoded by bacteriophages. Seventy-four STEC O26:H11 strains of various origins (including human, dairy, and cattle) were characterized for their stx subtypes and Stx phage chromosomal insertion sites.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  13. Genetic Diversity and Pathogenic Potential of Attaching and Effacing Escherichia coli O26:H11 Strains Recovered from Bovine Feces in the United States [Food Microbiology]

    • Applied and Environmental Microbiology
    • Escherichia coli O26 has been identified as the most common non-O157 Shiga toxin-producing E. coli (STEC) serogroup to cause human illnesses in the United States and has been implicated in outbreaks around the world. E. coli has high genomic plasticity, which facilitates the loss or acquisition of virulence genes. Attaching and effacing E.

      • Enterohemorrhagic Escherichia coli
      • Bacterial pathogens
  14. Do the A Subunits Contribute to the Differences in the Toxicity of Shiga Toxin 1 and Shiga Toxin 2?

    • Toxins
    • Shiga toxin producing Escherichia coli O157:H7 (STEC) is one of the leading causes of food-poisoning around the world. Some STEC strains produce Shiga toxin 1 (Stx1) and/or Shiga toxin 2 (Stx2) or variants of either toxin, which are critical for the development of hemorrhagic colitis (HC) or hemolytic uremic syndrome (HUS). Currently, there are no therapeutic treatments for HC or HUS. E.

      • Bacterial pathogens
      • Escherichia coli O157:H7
  15. Assessing the Public Health Risk of Shiga Toxin-Producing Escherichia coli by Use of a Rapid Diagnostic Screening Algorithm [Bacteriology]

    • Journal of Clinical Microbiology
    • Shiga toxin-producing Escherichia coli (STEC) is an enteropathogen of public health concern because of its ability to cause serious illness and outbreaks. In this prospective study, a diagnostic screening algorithm to categorize STEC infections into risk groups was evaluated. The algorithm consists of prescreening stool specimens with real-time PCR (qPCR) for the presence of stx genes.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  16. Evaluation of the Dynamics of Microbiological Quality in Lightly Pickled Napa Cabbages During Manufacture

    • Journal of Food Safety
    • Following a large outbreak of Shiga toxin-producing Escherichia coli (STEC) O157 infection in 2012, the prerequisite program for the production of pickles in Japan was revised to include disinfection with sodium hypochlorite (NaClO). Here, we examined the indicator bacterial counts, incidence of STEC and Salmonella spp.

      • Bacterial pathogens
  17. Detection of Shiga Toxins by Lateral Flow Assay

    • Toxins
    • Shiga toxin-producing Escherichia coli (STEC) produce shiga toxins (Stxs) that can cause human disease and death. The contamination of food products with STEC represents a food safety problem that necessitates rapid and effective detection strategies to mitigate risk.

      • Bacterial pathogens
  18. Use of the ecf1 Gene To Detect Shiga Toxin–Producing Escherichia coli in Beef Samples

    • Journal of Food Protection
    • Livezey, Kristin W. et al. Escherichia coli O157:H7 and six serovars (O26, O103, O121, O111, O145, and O45) are frequently implicated in severe clinical illness worldwide. Standard testing methods using stx, eae, and O serogroup–specific gene sequences for detecting the top six non-O157 STEC bear the disadvantage that these genes may reside, independently, in different nonpathogenic organisms, leading to false-positive results.

      • Bacterial pathogens
  19. Characterization of Shigella sonnei Isolate Carrying Shiga Toxin 2–Producing Gene

    • Emerging Infectious Diseases
    • To the Editor: Shigella sonnei causes a bacillary dysentery called shigellosis. Shiga toxins 1 (Stx1) and 2 (Stx2) are mainly produced by Shiga toxin–producing Escherichia coli (STEC), but Stx1 can also be produced by S. dysenteriae serotype 1 (1).

  20. Diversity of CRISPR loci and virulence genes in pathogenic Escherichia coli isolates from various sources

    • International Journal of Food Microbiology
    • Publication date: 2 July 2015
      , Volume 204
      Author(s): Yun Jiang , Shuang Yin , Edward G. Dudley , Catherine N. Cutter

      • Bacterial pathogens
  21. Inactivation of Shiga Toxin-Producing Escherichia coli in lean ground beef by gamma irradiation

    • Food Microbiology
    • Publication date: August 2015
      , Volume 49
      Author(s): Christopher Sommers , Kathleen T. Rajkowski , O. Joseph Scullen , Jennifer Cassidy , Pina Fratamico , Shiowshuh Sheen

  22. Inhibition of water absorption and selective damage to human colonic mucosa induced by Shiga toxin-2 are enhanced by Escherichia coli O157:H7 infection

    • International Journal of Medical Microbiology
    • Publication date: Available online 5 March 2015

      Author(s): Adriana Albanese , Elizabeth Gerhardt , Hugo García , Natalia Amigo , Angel Cataldi , Elsa Zotta , Cristina Ibarra

  23. Virulence characterization of non-O157 Shiga toxin-producing Escherichia coli isolates from food, humans and animals

    • Food Microbiology
    • Publication date: September 2015
      , Volume 50
      Author(s): Jinling Shen , Lydia Rump , Wenting Ju , Jingdong Shao , Shaohua Zhao , Eric Brown , Jianghong Meng

  24. Identification of five Shiga toxin-producing Escherichia coli genes by Luminex microbead-based suspension array

    • Journal of Microbiological Methods
    • Publication date: April 2015
      , Volume 111
      Author(s): Insook Son , Rachel Binet , Andrew Lin , Thomas S. Hammack , Julie A. Kase
      To rapidly identify the presence of potentially virulent O157:H7 and non-O157 Shiga toxin-producing Escherichia coli (STEC), a PCR-based Luminex suspension assay was developed to detect the genes coding for four virulence factors ( stx 1, stx 2, eae , and ehxA ) plus the O157:H7-specific + 93 uidA single nucleotide polymorphism.

  25. Effect of lysozyme or antibiotics on fecal zoonotic pathogens in nursery pigs

    • Journal of Applied Microbiology
    • Aim
      The objective of this study was to determine the effect of lysozyme and antibiotics on zoonotic pathogen shedding in faeces from nursery pigs housed without and with an indirect disease challenge.