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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 76 - 100 of 1282

  1. UK‐wide risk factor study of broiler carcases highly contaminated with Campylobacter

    • Zoonoses and Public Health
    • Zoonoses and Public Health, EarlyView. Campylobacter is a major cause of food poisoning and is typically the most common cause of gastroenteritis in the UK. Data collected at broiler farm and abattoir level, for slaughter batches that were sampled for UK-wide monitoring, were used to generate two epidemiological risk factor models.

      • Bacterial pathogens
      • Campylobacter
  2. Genomic Insights into Pangenome and Antimicrobial Resistance in Campylobacter spp. Isolated from Chickens at Specific Growth Stages

    • Foodborne Pathogens and Disease
      • Bacterial pathogens
      • Campylobacter
  3. Prioritization of vegetable-borne biological hazards in Argentina using a multicriteria decision analysis tool

    • Food Science and Technology International
    • Vegetables, especially those eaten raw, have been implicated in several foodborne disease outbreaks. Since multiple vegetable matrices and hazards are involved, risk managers have to prioritize those with the greatest impact on public health to design control strategies. In this study, a scientific-based risk ranking of foodborne pathogens transmitted by leafy green vegetables in Argentina was performed.

      • Bacterial pathogens
      • Campylobacter
      • Escherichia coli O157:H7
      • Salmonella
      • Shigella
      • Yersinia
      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
      • Toxoplasma gondii
      • Viruses
      • Hepatitis
      • Norovirus
  4. Complete Genome Sequence of Campylobacter jejuni BSD5, a Multidrug-Resistant Isolate from a Poultry Processing Facility in the United States

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Raw poultry can harbor microbial pathogens. Campylobacter jejuni BSD5, isolated from a critical control point within a poultry production plant, was sequenced. Genome annotation revealed several virulence genes including antibiotic resistance genes in agreement with the phenotypic results, indicating a potential risk of this strain to public health.

      • Bacterial pathogens
      • Campylobacter
  5. Fecal Microbial Structure and Metabolic Profile in Post-Weaning Diarrheic Piglets

    • Genes
    • (1) Piglet diarrhea is one of the most serious diseases in pigs and has brought great economic losses to the pig industry. Alteration of the gut microbiota is an important factor in the etiology of piglet diarrhea. Therefore, this study aimed to analyze the differences in the gut microbial structures and fecal metabolic profile between post-weaning diarrhea and healthy Chinese Wannan Black pigs.

      • Bacterial pathogens
      • Campylobacter
  6. Xylo-oligosaccharides improve the adverse effects of plant-based proteins on weaned piglet health by maintaining the intestinal barrier and inhibiting harmful bacterial growth

    • Frontiers in Microbiology
    • Introduction Piglets are more susceptible to weaning stress syndrome when fed high levels of plant-based proteins that contain abundant food antigens and anti-nutritional factors. Xylo-oligosaccharides (XOS) are a potential prebiotic that may improve the tolerance of weaned piglets to plant-based proteins.

      • Bacterial pathogens
      • Campylobacter
  7. Genomic Characterization of Antibiotic-Resistant Campylobacterales Isolated from Chilean Poultry Meat

    • Antibiotics
    • Due to the lack of knowledge about Campylobacterales in the Chilean poultry industry, the objective of this research was to know the prevalence, resistance, and genotypes of Campylobacter, Arcobacter and Helicobacter in 382 samples of chicken meat purchased in Valdivia, Chile. The samples were analyzed using three isolation protocols. Resistance to four antibiotics was evaluated by phenotypic methods.

      • Bacterial pathogens
      • Campylobacter
  8. Persistence of Campylobacter spp. in Poultry Flocks after Disinfection, Virulence, and Antimicrobial Resistance Traits of Recovered Isolates

    • Antibiotics
    • To investigate the persistence risk of Campylobacter spp. in poultry farms, and to study the virulence and antimicrobial resistance characteristics in the recovered strains, we collected 362 samples from breeding hen flocks, before and after disinfection. The virulence factors were investigated by targeting the genes; flaA, cadF, racR, virB11, pldA, dnaJ, cdtA, cdtB, cdtC, ciaB, wlaN, cgtB, and ceuE by PCR.

      • Bacterial pathogens
      • Campylobacter
  9. Association between ability to form biofilm and virulence factors of poultry extra-intestinal Campylobacter jejuni and Campylobacter coli

    • Veterinary Microbiology
    • Campylobacter species are known to be able to produce biofilm, which represents an ideal protective environment for the maintenance of such fragile bacteria. Since the genetic mechanisms promoting biofilm formation are still poorly understood, in this study we assessed the ability of C. jejuni (n = 7) and C.

      • Bacterial pathogens
      • Campylobacter
  10. High prevalence of multidrug-resistant Campylobacter jejuni in sheep and goats milk in Jordan

    • International Dairy Journal
    • The prevalence and resistance of Cjejuni in small ruminants in Jordan to antimicrobials of human clinical importance and the management factors that associate with Cjejuni in the flocks were determined. Flock-level prevalence of Cjejuni was 28.5%; individual animals’ prevalence was 11.0%.

      • Bacterial pathogens
      • Campylobacter
  11. Combined effect of metabolites produced by a modified Lactobacillus casei and berry phenolic extract on Campylobacter and microbiome in chicken cecum contents

    • Journal of Food Science
    • Journal of Food Science, EarlyView. Campylobacter is one of the most common foodborne bacterial pathogens causing illness, known as campylobacteriosis, in the United States. More than 70% of the campylobacteriosis cases have direct or indirect relation with poultry/poultry products.

      • Bacterial pathogens
      • Campylobacter
  12. Antimicrobial Susceptibility of Bacteria Isolated from Freshwater Mussels in the Wildcat Creek Watershed, Indiana, United States

    • Antibiotics
    • Antimicrobial resistance (AMR) is a global health crisis that threatens the health of humans and animals. The spread of resistance among species may occur through our shared environment. Prevention of AMR requires integrated monitoring systems, and these systems must account for the presence of AMR in the environment in order to be effective.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Staphylococcus aureus
  13. Microbial diversity and community composition of fecal microbiota in dual-purpose and egg type ducks

    • Frontiers in Microbiology
    • Introduction Ducks are important agricultural animals, which can be divided into egg and dual-purpose type ducks according to economic use. The gut microbiota of ducks plays an important role in their metabolism, immune regulation, and health maintenance.

      • Bacterial pathogens
      • Campylobacter
  14. Roles of viable but non-culturable state in the survival of Campylobacter jejuni

    • Frontiers in Cellular and Infection Microbiology
    • Despite being considered fragile and fastidious, Campylobacter jejuni is the most prevalent cause of foodborne bacterial gastroenteritis, and chicken meat is considered the main vehicle of transmission to humans. This agent can survive adverse conditions in the form of biofilms, but extreme stress (nutritional, oxidative and thermal) promotes the acquisition of a state called viable but not culturable (VBNC).

      • Bacterial pathogens
      • Campylobacter
  15. An overview of the use of bacteriophages in the poultry industry: Successes, challenges, and possibilities for overcoming breakdowns

    • Frontiers in Microbiology
    • The primary contaminants in poultry are Salmonella enterica, Campylobacter jejuni, Escherichia coli, and Staphylococcus aureus. Their pathogenicity together with the widespread of these bacteria, contributes to many economic losses and poses a threat to public health. With the increasing prevalence of bacterial pathogens being resistant to most conventional antibiotics, scientists have rekindled interest in using bacteriophages as antimicrobial agents.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Staphylococcus aureus
  16. The potential role of migratory birds in the transmission of pathogenic Campylobacter species to broiler chickens in broiler poultry farms and live bird markets

    • BMC Microbiology
    • Background Campylobacter species (spp.) are one of the most important zoonotic bacteria possessing potential hazards for animal and human health worldwide. Migratory birds are implicated as significant carriers for microbes and a play very important role in the dissemination of Campylobacter to broiler chickens and their environment.

      • Bacterial pathogens
      • Campylobacter
  17. Ferric quinate (QPLEX) inhibits the interaction of major outer membrane protein (MOMP) with the Lewis b (Leb) antigen and limits Campylobacter colonization in broilers

    • Frontiers in Microbiology
    • Campylobacter jejuni colonizes hosts by interacting with Blood Group Antigens (BgAgs) on the surface of gastrointestinal epithelia. Genetic variations in BgAg expression affects host susceptibility to C. jejuni. Here, we show that the essential major outer membrane protein (MOMP) of C.

      • Bacterial pathogens
      • Campylobacter
  18. Effects of dietary yeast cell wall supplementation on growth performance, intestinal Campylobacter jejuni colonization, innate immune response, villus height, crypt depth, and slaughter characteristics of broiler chickens inoculated with Campylobacter...

    • Poultry Science
    • A study was conducted to assess the effects of a dietary yeast cell wall (YCW) with and without a Campylobacter jejuni (CJ) challenge.

      • Bacterial pathogens
      • Campylobacter
  19. Complete Genome Sequence of Campylobacter hepaticus RBCL71delta, Associated with Spotty Liver Disease in Organic Pasture-Raised Laying Hens in Georgia, USA

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Spotty liver disease (SLD) is as an important cause of disease in egg-producing flocks. The organisms implicated include Campylobacter hepaticus and Campylobacter bilis. Here, we report the complete genome sequence of C. hepaticus strain RBCL71delta and three additional strains, isolated from a layer flock in Georgia, USA.

      • Bacterial pathogens
      • Campylobacter
  20. MLST genotypes and quinolone resistance profiles of Campylobacter jejuni isolates from various sources in Turkey

    • International Journal of Food Microbiology
    • This study was conducted to determine the overall genetic diversity, as well as prevalence and mechanisms of resistance to quinolone antibiotics of 178 Campylobacter jejuni isolated from humans, cattle, dogs, and chickens in Turkey. Multilocus sequence typing (MLST) and E-test were performed for genotyping and antimicrobial susceptibility testing, respectively.

      • Bacterial pathogens
      • Campylobacter
  21. Overview of Virulence and Antibiotic Resistance in Campylobacter spp. Livestock Isolates

    • Antibiotics
    • Campylobacter remains the most prevalent foodborne pathogen bacterium responsible for causing gastroenteritis worldwide. Specifically, this pathogen colonises a ubiquitous range of environments, from poultry, companion pets and livestock animals to humans. The bacterium is uniquely adaptable to various niches, leading to complicated gastroenteritis and, in some cases, difficult to treat due to elevated resistance to certain antibiotics.

      • Bacterial pathogens
      • Campylobacter
  22. Detection, characterization, and persistence of Campylobacter hepaticus, the cause of Spotty Liver Disease in layer hens

    • Poultry Science
    • Campylobacter species was first described as the etiological agent of Spotty Liver Disease (SLD) in 2015 and subsequently named as Campylobacter hepaticus in 2016. The bacterium predominantly affects barn and/or free-range hens at peak lay, is fastidious and difficult to isolate, which has impeded elucidation of its sources, means of persistence and transmission.

      • Bacterial pathogens
      • Campylobacter
  23. Observations supporting hypothetical commensalism and competition between two Campylobacter jejuni strains colonizing the broiler chicken gut

    • Frontiers in Microbiology
    • Campylobacter jejuni is the most prevalent bacterial foodborne pathogen in humans. Given the wide genetic diversity of C. jejuni strains found in poultry production, a better understanding of the relationships between these strains within chickens could lead to better control of this pathogen on farms. In this study, 14-day old broiler chickens were inoculated with two C.

      • Bacterial pathogens
      • Campylobacter
  24. Molecular characterization of Arcobacter butzleri isolates from poultry in rural Ghana

    • Frontiers in Cellular and Infection Microbiology
    • In recent years, Arcobacter butzleri has gained clinical significance as an emerging diarrheagenic pathogen associated with poultry and water reservoirs. The full clinical significance of Arcobacter remains rather speculative due to variable virulence and antibiotic susceptibility of individual strains. The aims of the present study were (i) to identify antibiotic resistance genes (ARGs) in the genome sequences of two multidrug-resistant A.

      • Bacterial pathogens
      • Campylobacter
  25. Emergence of lnu(C) variant conferring lincomycin resistance in Campylobacter coli of chicken origin

    • International Journal of Food Microbiology
    • Lincomycin is widely used in respiratory and gastrointestinal infection in veterinary medicine and food animal production. Campylobacter members are vital foodborne pathogens causing campylobacteriosis, and the resistance to lincosamides is seldom reported. To date, only the rRNA methyltransferase Erm(B) has been confirmed to be associated with lincosamides resistance in Campylobacter.

      • Bacterial pathogens
      • Campylobacter