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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 126 - 150 of 1282

  1. Sequestration and efflux largely account for cadmium and copper resistance in the deep sea Nitratiruptor sp. SB155‐2 (Phylum Campylobacterota)

    • Environmental Microbiology
    • Environmental Microbiology, Accepted Article. In deep-sea hydrothermal vent environments, metal-enriched fluids and sediments abound, making these habitats ideal to study metal resistance in prokaryotes.

      • Bacterial pathogens
      • Campylobacter
      • Chemical contaminants
      • Heavy Metals
  2. Systematic Surveillance and Meta-Analysis of Antimicrobial Resistance and Food Sources from China and the USA

    • Antibiotics
    • Since the discovery of antibiotics in the 20th century, they have been used to fight against infections. The overuse of antibiotics in the wider environment has resulted in the emergence of multidrug-resistant bacteria. In developing countries such as China and developed countries such as the USA, there is evidence of the high pervasiveness of antibiotic-resistant infections.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Staphylococcus aureus
      • Vibrio
  3. Adaptations to high pressure of Nautilia sp. strain PV‐1, a piezophilic Campylobacterium (aka Epsilonproteobacterium) isolated from a deep‐sea hydrothermal vent

    • Environmental Microbiology
    • Environmental Microbiology, Accepted Article. Physiological and gene expression studies of deep-sea bacteria under pressure conditions similar to those experienced in their natural habitat are critical for understanding growth kinetics and metabolic adaptations to in situ conditions. The Campylobacterium (aka Epsilonproteobacterium) Nautilia sp.

      • Bacterial pathogens
      • Campylobacter
  4. Isolation, identification and antibiotic resistance profile of thermophilic Campylobacter species from Bovine, Knives and personnel at Jimma Town Abattoir, Ethiopia

    • PLOS ONE
    • by Motuma Debelo, Nezif Mohammed, Abebaw Tiruneh, Tadele Tolosa Thermophilic Campylobacter species are common cause of animal and human bacterial diseases with growing resistance to antimicrobials. The aim of this study was to determine the prevalence and antimicrobial susceptibility pattern of Campylobacter species from bovine, knives and personnel in Jimma Town, Ethiopia.

      • Bacterial pathogens
      • Campylobacter
  5. The impact of primary and secondary processing steps on Campylobacter concentrations on chicken carcasses and portions

    • Food Microbiology
    • Campylobacteriosis is the most commonly notified foodborne disease in New Zealand and poultry meat is the major source for human infection. Carcasses and portions were sampled from key points along primary and secondary processing chains of three New Zealand poultry processors to determine the impact of processing steps on Campylobacter concentrations.

      • Bacterial pathogens
      • Campylobacter
  6. Limosilactobacillus fermentum Strain 3872: Antibacterial and Immunoregulatory Properties and Synergy with Prebiotics against Socially Significant Antibiotic-Resistant Infections of Animals and Humans

    • Antibiotics
    • Limosilactobacillus fermentum strain 3872 (LF3872) was originally isolated from the breast milk of a healthy woman during lactation and the breastfeeding of a child. The high-quality genome sequencing of LF3872 was performed, and a gene encoding a unique bacteriocin was discovered. It was established that the bacteriocin produced by LF3872 (BLF3872) belongs to the family of cell-wall-degrading proteins that cause cell lysis.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Staphylococcus aureus
  7. Comparison of Antimicrobial Susceptibility Profiles of Thermotolerant Campylobacter spp. Isolated from Human and Poultry Samples in Georgia (Caucasus)

    • Antibiotics
    • Antimicrobial resistance remains a public health concern globally. This study presents antimicrobial resistance by microdilution and genetic diversity by the whole-genome sequencing of Campylobacter spp. from human and poultry samples isolated in Georgia in 2020/2021. The major species in poultry samples was C. coli, while C. jejuni was preferentially isolated from human samples. Resistance against tetracycline was highest (100%) in C. coli from industrial chicken and lowest in C.

      • Bacterial pathogens
      • Campylobacter
  8. Genetic Signature and Serocompatibility Evidence for Drug Resistant Campylobacter jejuni

    • Antibiotics
    • Campylobacteriosis, a foodborne illness, is one of the world′s leading causes of gastrointestinal illness. This study investigates the link between human campylobacteriosis and the consumption of potentially contaminated food with Campylobacter jejuni. Three hundred sixty samples were collected from humans, chicken cloaca, raw chicken meat, unpasteurized milk, and vegetables.

      • Bacterial pathogens
      • Campylobacter
  9. Prevalence and concentration of Campylobacter in faeces of dairy cows: A systematic review and meta-analysis

    • PLOS ONE
    • by Anna-Delia Knipper, Narges Ghoreishi, Tasja Crease The consumption of raw milk from dairy cows has caused multiple food-borne outbreaks of campylobacteriosis in the European Union (EU) since 2011. Cross-contamination of raw milk through faeces is an important vehicle for transmission of Campylobacter to consumers. This systematic review and meta-analysis, aimed to summarize data on the prevalence and concentration of Campylobacter in faeces of dairy cows.

      • Bacterial pathogens
      • Campylobacter
  10. Influence of Single Dose Enrofloxacin Injection on Development of Fluoroquinolone Resistance in Campylobacter jejuni in Calves

    • Antibiotics
    • Fluoroquinolone (FQ) resistance in a major foodborne bacterial pathogen, Campylobacter jejuni, derived from cattle has recently become prevalent and poses a significant public health concern. However, the underlying factors for this increase are not entirely clear. To evaluate the effect of enrofloxacin treatment on FQ-resistance development in C. jejuni, 35 commercial calves were equally divided into five groups (Groups 1–5) and were orally inoculated with FQ-susceptible (FQ-S) C.

      • Bacterial pathogens
      • Campylobacter
  11. Quantitative detection and genetic characterization of thermotolerant Campylobacter spp. in fresh chicken meats at retail in Japan

    • Frontiers in Microbiology
    • Campylobacter jejuni and C. coli are one of the leading causes of gastrointestinal illnesses, and which are considered to be transmitted to humans mainly from chicken meats. Considering the less availability of quantitative contamination data in the retail chicken meats in Japan, 510 fresh chicken meats retailed at five distinct regions in Japan between June 2019 and March 2021 were examined.

      • Bacterial pathogens
      • Campylobacter
  12. Development and validation of a CRISPR interference system for gene regulation in Campylobacter jejuni

    • BMC Microbiology
    • Background Campylobacter spp. are the leading cause of bacterial food-borne illness in humans worldwide, with Campylobacter jejuni responsible for 80% of these infections. There is an urgent need to understand fundamental C. jejuni biology for the development of new strategies to prevent and treat infections. The range of molecular tools available to regulate gene expression in C.

      • Bacterial pathogens
      • Campylobacter
  13. Occurrence and seasonality of Campylobacter spp. in Portuguese dairy farms

    • International Journal of Food Microbiology
    • The growing idea that natural products are better for consumption is creating behaviors that can lead to food safety problems and an increase of healthcare costs. One of the trending products is raw milk, which in some countries is sold by vending machines outside dairy farms. Campylobacteriosis is the most common gastrointestinal infection in humans in the European Union since 2005.

      • Bacterial pathogens
      • Campylobacter
  14. Quantitative assessment of Campylobacter spp. levels with real-time PCR methods at different stages of the broiler food chain

    • Food Microbiology
    • The importance of thermotolerant Campylobacter spp. as a food-borne pathogen continues to increase and there is a great need for rapid quantitative results in routine diagnostics. However, currently, only the culture-based ISO method is authorized for use in the context of official food control. The present study therefore aimed to assess the suitability of a qPCR method for a rapid quantitative determination of Campylobacter spp.

      • Bacterial pathogens
      • Campylobacter
  15. Antimicrobial effect of a drinking water additive comprising four organic acids on Campylobacter load in broilers and monitoring of bacterial susceptibility

    • Poultry Science
    • Application of organic acids via feed or drinking water is under discussion as a possible intervention strategy to reduce Campylobacter (C.) load in primary poultry production.

      • Bacterial pathogens
      • Campylobacter
  16. Prevalence of Campylobacter species and associated risk factors for contamination of dairy products collected in dry season from major milk sheds in Ethiopia

    • Food Microbiology
    • A cross-sectional study was conducted to investigate the prevalence and risk factors for contamination of Ethiopian dairy products with Campylobacter. A total of 912 dairy food samples were collected from establishments of 682 study participants that were interviewed.

      • Bacterial pathogens
      • Campylobacter
  17. Quantitative Determination Of Campylobacter On Broilers Along 22 UK Processing Lines, To Identify Potential Process Control Points and Cross-contamination From Colonized To Uncolonized Flocks.

    • As part of a program to reduce numbers of the human pathogen Campylobacter on retail chickens twenty-two broiler processing lines, representing over 90% of United Kingdom (UK) production, were characterized by enumerating Campylobacter on pooled neck skins after the exsanguination, scalding, defeathering, evisceration, crop removal, inside-outside washing, and air-chilling stages of processing.  Sixteen of the processing lines investigated showed significant (p<0.05) reductions in Cam

      • Bacterial pathogens
      • Campylobacter
  18. Effect of Probiotic E. coli Nissle 1917 Supplementation on the Growth Performance, Immune Responses, Intestinal Morphology, and Gut Microbes of Campylobacter jejuni Infected Chickens

    • Infection and Immunity
    • Infection and Immunity, Ahead of Print. Campylobacter jejuni is the most common cause of bacterial foodborne gastroenteritis and holds significant public health importance. The continuing increase of antibiotic-resistant Campylobacter necessitates the development of antibiotic-alternative approaches to control infections in poultry and in humans. Here, we assessed the ability of E.

      • Bacterial pathogens
      • Campylobacter
  19. Bacterial concentration and Campylobacter spp. quantification differ when fresh or ultra-frozen samples are analysed over time using molecular biology and culture-based methods

    • PLOS ONE
    • by Farina Khattak, Salvatore Galgano, Jos Houdijk The study aimed to delineate the robustness of the culture-based and molecular biology methods to assess the total bacterial concentration and Campylobacter jejuni (C. jejuni) quantification in caecal content, analysed as fresh or after being stored immediately at ultra-low (-80°C) temperature at different time points (for 3, 7, 14, 28 and 62 days post collection).

      • Bacterial pathogens
      • Campylobacter
  20. Complete Genome Sequences of Four Campylobacter jejuni Strains Isolated from Retail Chicken Meat and Broiler Feces

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Campylobacter jejuni is the leading pathogen that causes foodborne infections. Here, we report the complete genome sequences of four C. jejuni strains isolated from retail chicken meat and broiler feces samples. Genes encoding type VI secretion and antibiotic resistance were detected among these isolates.

      • Bacterial pathogens
      • Campylobacter
  21. Research Note: Campylobacter spp. control at field level two years after the implementation of European Regulation (EU) 2017/1495

    • Poultry Science
    • Campylobacteriosis was the most frequently reported foodborne infection in humans in the European Union in the last years. Campylobacter spp. in broiler flocks from Spain was monitored at farm level during 12-month period (2020–2021).

      • Bacterial pathogens
      • Campylobacter
  22. Molecular diagnosis of bovine genital campylobacteriosis using high-resolution melting analysis

    • Frontiers in Microbiology
    • Bovine Genital Campylobacteriosis (BGC) is a worldwide spread venereal disease of cattle caused by Campylobacter fetus subsp. venerealis (Cfv). Although several real-time PCR assays were developed for Cfv identification, most target mobile genetic elements, which may lead to false-positive diagnosis. In this study, a real-time PCR assay coupled with High-Resolution Melting analysis (HRM) was developed for the identification of Campylobacter fetus subspecies and application in BGC diagnosis.

      • Bacterial pathogens
      • Campylobacter
  23. Rhodiola rosea Reduces Intercellular Signaling in Campylobacter jejuni

    • Antibiotics
    • Campylobacter jejuni is a major foodborne pathogen and the leading cause of bacterial gastroenteritis, i.e., campylobacteriosis. Besides searching for novel antimicrobials, identification of new targets for their action is becoming increasingly important. Rhodiola rosea has long been used in traditional medicine. Ethanolic extracts from the roots and rhizomes of the plant contain a wide range of bioactive compounds with various pharmacological activities.

      • Bacterial pathogens
      • Campylobacter
  24. Prevalence of the phenicol resistance gene fexA in Campylobacter isolated from the poultry supply chain

    • International Journal of Food Microbiology
    • Florfenicol, an animal-specific broad-spectrum antibiotic, has been widely used in livestock and poultry breeding, which leads to the high antimicrobial resistance (AMR) of Campylobacter in food animals.

      • Bacterial pathogens
      • Campylobacter
  25. Metaphenotypes associated with recurrent genomic lineages of Campylobacter jejuni responsible for human infections in Luxembourg

    • Frontiers in Microbiology
    • Campylobacter jejuni is a leading cause of foodborne illnesses worldwide. Although considered fragile, this microaerophilic bacterium is able to survive in various challenging environments, which subsequently constitutes multiple sources of transmission for human infection. To test the assumption of acquiring specific features for adaptation and survival, we established a workflow of phenotypic tests related to the survival and the persistence of recurrent and sporadic strains.

      • Bacterial pathogens
      • Campylobacter