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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 151 - 175 of 1282

  1. Change of Campylobacter, Escherichia coli and Salmonella counts in packaged broiler breast meat stored under modified atmosphere and vacuum conditions at 4 and 10 °C based on cultural and molecular biological quantification

    • Food Control
    • Poultry on the European market is offered primarily as fresh meat and is usually sold at the retail level packed under either a modified atmosphere (MAP) or vacuum. Packaging is meant to retain product quality during retail offering and influences microbiological changes during storage.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
  2. Host‐associated variability of the cdtABC operon, coding for the cytolethal distending toxin, in Campylobacter jejuni

    • Zoonoses and Public Health
    • Zoonoses and Public Health, EarlyView. Campylobacter, a major cause of food-borne gastroenteritis worldwide, colonize the gastrointestinal tract of a wide range of animals, being birds the main reservoir. The mechanisms involved in the interaction of Campylobacter with the different hosts are poorly understood. The cytolethal distending toxin, encoded in the cdtABC operon, is considered a pivotal virulence factor during human infection.

      • Bacterial pathogens
      • Campylobacter
  3. Complete Genome Sequence of Campylobacter coli Strain P4581, a Hybrid Carrying Campylobacter jejuni Genomic Content, Isolated from Rhesus Monkey, Macaca mulatta

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Campylobacter coli is a leading bacterial cause of human gastroenteritis. We reported the circularized 1.8-Mbp complete genome of MLST type 1055 C. coli strain P4581 isolated from a rhesus monkey, Macaca mulatta, hybridizing Illumina short- and Nanopore long-reads.

      • Bacterial pathogens
      • Campylobacter
  4. Current methodologies and future direction of Campylobacter isolation and detection from food matrices, clinical samples, and the agricultural environment

    • Journal of Microbiological Methods
    • Campylobacter spp. are the leading cause of bacterial foodborne infections in both developed and developing countries. The food commodities primarily attributed to campylobacteriosis include raw milk, poultry, seafood, and fresh produce. Furthermore, insects, animal/bird fecal material, and agricultural water have been shown to be the sources of Campylobacter contamination in these commodities.

      • Bacterial pathogens
      • Campylobacter
  5. Prevalence and Antimicrobial Resistance of Campylobacter spp. Isolated from Broilers Throughout the Supply Chain in Valencia, Spain

    • Foodborne Pathogens and Disease
    • Campylobacter is a major foodborne pathogen and its antimicrobial resistance (AMR) has been described worldwide. The main objective of this study was to determine the occurrence and AMR of Campylobacter spp. isolated from broilers throughout the supply chain in Valencia, Spain. A total of 483 samples were included in the analysis: 430 from the slaughterhouse (chicken carcass and neck skin) and 53 from the point of sale (retail broiler and packaging).

      • Bacterial pathogens
      • Campylobacter
  6. In a warm climate, ventilation, indoor temperature and outdoor relative humidity have significant effects on Campylobacter spp. colonization in chicken broiler farms which can occur in only 2 days

    • Food Microbiology
    • A longitudinal study was conducted in five conventional broiler farms during a 2-year period to determine the dynamics of Campylobacter infection in a warm climate region (north-eastern Spain). Weekly sampling of 63 flocks was performed upon one-day-old chick placement, including animal and environmental samples. Campylobacter spp. detection was assessed by culture and non-culture methods.

      • Bacterial pathogens
      • Campylobacter
  7. Campylobacter jejuni and Other Emerging Campylobacteraceae in Retail Beef Liver ‐ An Underestimated Potential Source?

    • Letters in Applied Microbiology
    • Letters in Applied Microbiology, Accepted Article. Bovine by-products, such as liver, could be an underestimated source of Campylobacter jejuni. Therefore, our aims were to evaluate the occurrence of C.

      • Bacterial pathogens
      • Campylobacter
  8. Bio-responsive composite liposomes against Campylobacter jejuni in vitro and its application in chicken preservation

    • Innovative Food Science & Emerging Technologies
    • The infection of Campylobacter jejuni (C. jejuni) in food can cause huge economic and health costs, and liposomes based on biological switch is a promising antibacterial strategy. In this study, a bio-responsive composite liposome was designed with silk fibroin and L-fucose (FLPs) based on the chemotaxis and protease of C. jejuni, and Litsea cubeba essential oil as antibacterial agent.

      • Bacterial pathogens
      • Campylobacter
  9. Two-component regulatory systems in Helicobacter pylori and Campylobacter jejuni: Attractive targets for novel antibacterial drugs

    • Frontiers in Cellular and Infection Microbiology
    • Two-component regulatory systems (TCRS) are ubiquitous signal transduction mechanisms evolved by bacteria for sensing and adapting to the constant changes that occur in their environment.

      • Bacterial pathogens
      • Campylobacter
  10. Combining enrichment with multiplex real-time PCR leads to faster detection and identification of Campylobacter spp. in food compared to ISO 10272–1:2017

    • Food Microbiology
    • Conventional protocols for the detection of Campylobacter from foods are laborious and time-consuming. This research describes an alternative procedure (EMRT-PCR) for the detection of Campylobacter from food by combining ISO 10272–1:2017 enrichment in Bolton broth (BB) with a multiplex real-time (MRT-) PCR assay. Species differentiation was done by targeting C. jejuni (mapA), C.

      • Bacterial pathogens
      • Campylobacter
  11. Molecular markers associated with antimicrobial resistance and genotypes of Campylobacter jejuni, and Campylobacter coli isolated from broiler and swine flocks in southeast Brazil

    • Comparative Immunology, Microbiology and Infectious Diseases
    • This study aimed to identify molecular markers associated with antimicrobial resistance and genotype in isolates of Campylobacter spp. isolated from broiler and swine flocks due to its importance to one-health. C. jejuni (n=27) and C.

      • Bacterial pathogens
      • Campylobacter
  12. Antibiotic Resistance in Bacteria—A Review

    • Antibiotics
    • A global problem of multi-drug resistance (MDR) among bacteria is the cause of hundreds of thousands of deaths every year. In response to the significant increase of MDR bacteria, legislative measures have widely been taken to limit or eliminate the use of antibiotics, including in the form of feed additives for livestock, but also in metaphylaxis and its treatment, which was the subject of EU Regulation in 2019/6.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Staphylococcus aureus
  13. Longitudinal Changes in Campylobacter and the Litter Microbiome throughout the Broiler Production Cycle

    • Applied and Environmental Microbiology
    • Applied and Environmental Microbiology, Ahead of Print. Broiler chickens are an important source of Campylobacter to humans and become colonized on the farm, but the role of the litter in the ecology of Campylobacter is still not clear. The aim of this study was to examine the relationship between Campylobacter and the changes in the litter microbiome throughout the broiler production cycle.

      • Bacterial pathogens
      • Campylobacter
  14. Exploiting Violet-Blue Light to Kill Campylobacter jejuni: Analysis of Global Responses, Modeling of Transcription Factor Activities, and Identification of Protein Targets

    • mSystems
    • mSystems, Ahead of Print. Campylobacter jejuni is a microaerophilic foodborne zoonotic pathogen of worldwide concern as the leading cause of bacterial gastroenteritis. Many strains are increasingly antibiotic resistant and new methods of control are required to reduce food-chain contamination. One possibility is photodynamic inactivation (PDI) using violet-blue (VB) light, to which C. jejuni is highly susceptible.

      • Bacterial pathogens
      • Campylobacter
  15. A smartphone-assisted high-throughput integrated color-sensing platform for the rapid detection of Campylobacter coli

    • LWT
    • Campylobacter is one of the most common foodborne pathogens worldwide. A new smartphone-assisted high-throughput integrated color-sensing platform, called the HICS platform, was developed for the rapid detection of Campylobacter coli. This platform was based on the visual loop-mediated isothermal amplification method. Using this system, as many as 64 samples could be assessed in less than an hour after enrichment.

      • Bacterial pathogens
      • Campylobacter
  16. The effect of Campylobacter jejuni and Campylobacter coli colonization on the gut morphology, functional integrity, and microbiota composition of female turkeys

    • Gut Pathogens
    • Background Campylobacter (C.) species are the most common bacterial cause of foodborne diarrhea in humans. Despite colonization, most animals do not show clinical signs, making recognition of affected flocks and disruption of the infection chain before slaughter challenging. Turkeys are often cocolonized with C. jejuni and C. coli.

      • Bacterial pathogens
      • Campylobacter
  17. Genomic diversity, virulence and source of Campylobacter jejuni contamination in Irish poultry slaughterhouses by whole genome sequencing

    • Journal of Applied Microbiology
    • Journal of Applied Microbiology, Accepted Article. Aims The aim was to exploit WGS to assess genomic diversity, identify virulence genes and deduce the proportion of Campylobacter colonised broilers that directly contaminate their carcasses. Methods and Results C.

      • Bacterial pathogens
      • Campylobacter
  18. Antioxidant and Antimicrobial Properties of Helichrysum italicum (Roth) G. Don Hydrosol

    • Antibiotics
    • (1) According to the emergence and spread of antibiotic resistance, there is an urge for new promising substances. The purpose of the study was to test the antioxidant, cytotoxic and antimicrobial properties of the Helichrysum italicum (Roth) G. Don essential oil (EO) and hydrosol. (2) Methods: The antioxidant potential was determined using the DPPH (2,2-diphenyl-1-picrylhydrazyl) method.

      • Bacterial pathogens
      • Campylobacter
      • Staphylococcus aureus
  19. Anti-Campylobacter Probiotics: Latest Mechanistic Insights

    • Foodborne Pathogens and Disease
    • The Campylobacter genus is the leading cause of human gastroenteritis, with the consumption of contaminated poultry meat as the main route of infection. Probiotic bacteria, such as LactobacillusBacillusEscherichia coli Nissle, and Bifidobacterium species, have a great immunomodulatory capacity and exhibit antipathogenic effects through various molecular mechanisms.

      • Bacterial pathogens
      • Campylobacter
  20. Campylobacter biofilms

    • Microbiological Research
    • Campylobacter infection is one of the most widespread foodborne gastroenteritis worldwide. As a commensal microbe in the intestinal tracts of food-producing animals, Campylobacter easily enters the food chain and eventually transmits to human hosts through the consumption of contaminated food products.

      • Bacterial pathogens
      • Campylobacter
  21. Investigation on the colonisation of Campylobacter strains in the pig intestine depending on available metabolites

    • Comparative Immunology, Microbiology and Infectious Diseases
    • Campylobacter (C.) spp. represent one of the most important causes for food-borne bacterial pathogen in humans worldwide. The aim of this study was to investigate metabolic requirements of two Campylobacter strains of different species based on substrate utilisation (in vitro).

      • Bacterial pathogens
      • Campylobacter
  22. A pilot study revealing host‐associated genetic signatures for source attribution of sporadic Campylobacter jejuni infection in Egypt

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Volume 69, Issue 4, Page 1847-1861, July 2022. Campylobacter jejuni (C. jejuni), is considered among the most common bacterial causes of human bacterial gastroenteritis worldwide. The epidemiology and the transmission dynamics of campylobacteriosis in Egypt remain poorly defined due to the limited use of high-resolution typing methods.

      • Bacterial pathogens
      • Campylobacter
  23. Should We Consider Them as a Threat? Antimicrobial Resistance, Virulence Potential and Genetic Diversity of Campylobacter spp. Isolated from Varsovian Dogs

    • Antibiotics
    • Campylobacteriosis seems to be a growing problem worldwide. Apart from the most common sources of numerous Campylobacter species, such as poultry and other farm animals, dogs may be an underrated reservoir of this pathogen. Our goal was to establish the frequency of occurrence, antimicrobial resistance, and detection of chosen virulence factor genes in genomes of canine Campylobacter isolates. Campylobacter isolates frequency in dogs from shelters, and private origin was 13%.

      • Bacterial pathogens
      • Campylobacter
  24. Complete Genome Sequences of Multidrug-Resistant Campylobacter coli Strains YH501, YH503, and YH504, from Retail Chicken

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Campylobacter coli is an important foodborne pathogen that can cause inflammation of the intestine and diarrhea in humans. The complete genomes, including megaplasmids, of C. coli strains YH501, YH503, and YH504 from retail chicken were sequenced and de novo assembled.

      • Bacterial pathogens
      • Campylobacter
  25. High resolution parallel sequencing reveals multi-strain Campylobacter in broiler chicken flocks testing ‘negative’ by conventional culture methods: implications for control of Campylobacter infection.

    • Poultry Science
    • Contaminated chicken meat is a major source of human Campylobacteriosis and rates of infection remain high, despite efforts to limit the colonisation of broiler (meat) chicken flocks on farms. Using conventional testing methods of culture or qPCR, Campylobacter is typically detected amongst broiler flocks from 3 weeks of age, leading to the assumption that infection is introduced horizontally into chicken rearing houses at this time.

      • Bacterial pathogens
      • Campylobacter