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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 176 - 200 of 1282

  1. Campylobacter jejuni permeabilizes the host cell membrane by short chain lysophosphatidylethanolamines

    • Gut Microbes
    • Lysophospholipids (LPLs) are crucial for regulating epithelial integrity and homeostasis in eukaryotes, however the effects of LPLs produced by bacteria on host cells is largely unknown. The membrane of the human bacterial pathogen Campylobacter jejuni is rich in LPLs. Although C. jejuni possesses several virulence factors, it lacks traditional virulence factors like type III secretion systems, present in most enteropathogens.

      • Bacterial pathogens
      • Campylobacter
  2. High rates of macrolide and fluoroquinolone resistance in human campylobacteriosis in the Middle East and North Africa

    • Future Microbiology
    • Campylobacter is one of the main causative agents of bacterial gastrointestinal infections. Recently, a rise in the incidence of campylobacteriosis has been reported worldwide. Despite the clinical importance of this zoonotic disease, its microbiological diagnosis is not systematically performed in clinical laboratories in developing countries such as the Middle East and North Africa region.

      • Bacterial pathogens
      • Campylobacter
  3. Bacillus subtilis PS-216 Spores Supplemented in Broiler Chicken Drinking Water Reduce Campylobacter jejuni Colonization and Increases Weight Gain

    • Frontiers in Microbiology
    • Campylobacter jejuni is the leading cause of bacterial gastroenteritis, or campylobacteriosis, in humans worldwide, and poultry serves as a major source of infection. To reduce the risk associated with C. jejuni transmission via poultry meat, effective interventions during poultry production are needed, and the use of probiotics is a promising approach. In this study, 15 Bacillus subtilis strains were initially screened for their anti-Campylobacter activities. B.

      • Bacterial pathogens
      • Campylobacter
  4. Effect of Doxycycline Use in the Early Broiler Production Cycle on the Microbiome

    • Frontiers in Microbiology
    • 16S rRNA amplicon sequencing was used to investigate changes in the broiler gastrointestinal tract (GIT) microbiota throughout the rearing period and in combination with antibiotic treatment.

      • Bacterial pathogens
      • Campylobacter
  5. The temporal pattern and relationship of Campylobacter prevalence in broiler slaughter batches and human campylobacteriosis cases in Sweden 2009–2019

    • International Journal of Food Microbiology
    • Thermophilic Campylobacter species are the most common cause of bacterial gastroenteritis worldwide, and handling and consumption of broiler meat is considered a major foodborne transmission route. Both the incidence of campylobacteriosis and the prevalence of Campylobacter in broilers show seasonality but the impact of this association and broiler prevalence on human incidence is not clear.

      • Bacterial pathogens
      • Campylobacter
  6. Campylobacter jejuni Biofilm Control with Lavandin Essential Oils and By-Products

    • Antibiotics
    • The food industry is constantly struggling with one of the most prevalent biofilm-forming and food-borne pathogenic bacteria, Campylobacter jejuni. Different approaches are used to control biofilms in the food production chain, but none is fully effective.

      • Bacterial pathogens
      • Campylobacter
  7. Complete Genome Sequencing of Campylobacter jejuni Strain X Reveals the Presence of pVir- and pTet-like Plasmids

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Here, I report the complete genome sequence of Campylobacter jejuni strain X, containing two plasmids similar to pVir and pTet, which were originally identified in strain 81-176. Scrutiny of complete genome sequences in GenBank revealed several other strains with similar plasmid contents. Comparative genome analysis suggested a common origin of these plasmids.

      • Bacterial pathogens
      • Campylobacter
  8. The anti-campylobacter activity of eugenol and its potential for poultry meat safety: A review

    • Food Chemistry
    • Poultry is one of the fastest growing industries due to advantages in land use, rapid production and advances in feed technology. The rising trend in the consumption of poultry meat over the last 50 years has also increased concerns about food safety. Campylobacter jejuni is the leading bacterial cause of gastroenteritis, the foremost cause of foodborne deaths.

      • Bacterial pathogens
      • Campylobacter
  9. Virulence Profiling, Multidrug Resistance and Molecular Mechanisms of Campylobacter Strains from Chicken Carcasses in Tunisia

    • Antibiotics
    • Antibiotic resistance in foodborne pathogens is an emergent global health concern. The objectives of this study were to assess antimicrobial resistance (AMR) in Campylobacter isolates from chicken carcasses and to investigate the AMR molecular mechanisms as well as the presence of virulence determinants. The study was performed on 257 samples collected from abattoirs and retail shops in northeastern Tunisia. Forty-eight Campylobacter isolates were recovered and identified as C.

      • Bacterial pathogens
      • Campylobacter
  10. Enrichment and Direct Plating for Detection of Campylobacter in Chicken Liver Rinse and Exudate

    • Foodborne campylobacteriosis has been traced to undercooked chicken liver dishes; it is important to use the best available culture methods when testing for the presence of Campylobacter .  We compared two Campylobacter enrichment broths (Bolton formulation and Neogen formulation) in combination with three selective plating media (Campy-Cefex, Campy-Line and RF Campylobacter agars) for detection of Campylobacter from fresh retail chicken livers.  In each of three experiments, nine r

      • Bacterial pathogens
      • Campylobacter
  11. Prevalence and characterization of Campylobacter species from chickens sold at informal chicken markets in Gauteng, South Africa

    • The study determined the prevalence, risk factors, and characteristics of Campylobacter species contamination of chicken carcasses sold at informal poultry outlets in Gauteng, South Africa. Using six townships, 151 chicken carcasses were collected from 47 outlets. Carcass and cloacal swabs, as well as carcass drip, were collected from each chicken along with a matched questionnaire on risk factors regarding Campylobacter contamination.

      • Bacterial pathogens
      • Campylobacter
  12. Comprehensive Analysis of Gut Microbiota and Fecal Bile Acid Profiles in Children With Biliary Atresia

    • Frontiers in Cellular and Infection Microbiology
    • Background

      Biliary atresia (BA) is the most common cholestatic liver disease in neonates. Herein, we aimed at characterizing the gut microbiota and fecal bile acid profiles of BA patients, defining the correlations between them, and evaluating the relationship between the clinical pathogenesis and changes in the gut microbiota and bile acid profiles.

      Methods

      • Bacterial pathogens
      • Campylobacter
  13. Encapsulated phenolic compounds from Ferula gummosa leaf: A potential phytobiotic against campylobacter jejuni infection

    • Journal of Food Processing and Preservation
    • Journal of Food Processing and Preservation, Accepted Article. This research was performed to encapsulate the phenolic-rich fraction (PRF) obtained from Ferula gummosa (F. gummosa) leaves by utilizing the spray-drying technique. Further, the physicochemical properties and antioxidant and antibacterial activities of the PRF were evaluated against Campylobacter jejuni (C. jejuni) infection in mice.

      • Bacterial pathogens
      • Campylobacter
  14. Comparative and analytical characterization of the oral bacteriome of smokeless tobacco users with oral squamous cell carcinoma

    • Applied Microbiology and Biotechnology
    • Abstract Oral cavity squamous cell carcinoma (OSCC) is the most common type of head and neck cancer worldwide. Smokeless tobacco (SLT) has been well proven for its role in oral carcinogenesis due to the abundance of several carcinogens. However, the role of inhabitant microorganisms in the oral cavity of smokeless tobacco users has not yet been well explored in the context of OSCC.

      • Bacterial pathogens
      • Campylobacter
      • Staphylococcus aureus
  15. Prevalence and antibacterial susceptibilities of Arcobacter spp. and Campylobacter spp. from fresh vegetables

    • World Journal of Microbiology and Biotechnology
    • This study was aimed at the isolation and identification of Arcobacter spp. and Campylobacter spp. from fresh vegetables sold at district markets in the Kayseri province, and at the determination of the antibacterial susceptibility of the recovered isolates. For this purpose, a total of 175 vegetable samples, including 35 spinach, 35 lettuce, 35 parsley, 35 arugula, and 35 radish samples, were collected.

      • Bacterial pathogens
      • Campylobacter
  16. Research Note Survival of Campylobacter jejuni, Salmonella, and Listeria monocytogenes and Temperature Change in Low-temperature–Long-time-cooked Chicken Meat

    • Low-temperature­–long-time (LT–LT) cooking, also known as sous vide cooking, in which meat is sealed in a bag and cooked in hot water at a relatively low-temperature of around 60°C, increased in popularity; indeed, home-use low-temperature cookers are now commercially available. However, after LT–LT cooking, if even a small number of foodborne bacteria remain, they could cause infection and foodborne illnesses.

      • Bacterial pathogens
      • Campylobacter
      • Listeria monocytogenes
      • Salmonella
  17. Enteric Illness Outbreaks Reported Through the National Outbreak Reporting System—United States, 2009–2019

    • Clinical Infectious Diseases
    • Background The National Outbreak Reporting System (NORS) captures data on foodborne, waterborne, and enteric illness outbreaks in the United States. This study describes enteric illness outbreaks reported during 11 years of surveillance. Methods We extracted finalized reports from NORS for outbreaks occurring during 2009–2019.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Shigella
      • Viruses
      • Norovirus
  18. Development and evaluation of a novel polymerase spiral reaction-based testing technique for same-day visual detection of Campylobacter coli in pork

    • Food Microbiology
    • The developed polymerase spiral reaction-based technique specifically amplified the ceuE gene of C. coli and involved a three-step centrifugation method for DNA extraction. PSR, real-time and end-point PCR were able to detect 62 fg, 620 fg and 6.2 pg C. coli DNA/tube, respectively.

      • Bacterial pathogens
      • Campylobacter
  19. Research Note: Effect of a phlorotannin extract of the brown seaweed Ascophyllum nodosum as a potential control strategy against Campylobacter in broilers

    • Poultry Science
    • Poultry is generally recognized as the main source of human campylobacteriosis and Campylobacter is highly prevalent at the farm level. To reduce the relative risk of human campylobacteriosis attributable to broiler meat, it is necessary to reduce Campylobacter loads in broiler ceca but to date, no effective, reliable and practical strategy is available.

      • Bacterial pathogens
      • Campylobacter
  20. Detection of Campylobacter jejuni Presence in Trinidad’s Aquatic Environments

    • Water, Air, & Soil Pollution
    • Water quality is a growing concern throughout the developing world and the effects of water pollution can be both harmful and costly. Increasing levels of fecal pollution and associated waterborne pathogens pose a potential economic constraint and hardship for Caribbean islands as their economies primarily depend on a thriving coastal tourism industry.

      • Bacterial pathogens
      • Campylobacter
  21. Genome Sequence of Campylobacter Strain 19-13652, Isolated from Breeding Pheasants

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. We report the whole-genome sequence of a Campylobacter strain that was isolated from breeding pheasants presenting “bulgy eyes” in Italy. Traditional molecular typing methods did not return any reliable result. Whole-genome sequencing and sequence comparison with known genomes did not meet the criteria for assignment to an existing species.

      • Bacterial pathogens
      • Campylobacter
  22. Draft Genome Sequence of Campylobacter jejuni ST-508 Strain Shizu21005, Isolated from an Asymptomatic Food Handler in Japan, 2021

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. Here, we report a draft genome sequence of Campylobacter jejuni strain Shizu21005, isolated from a food handler with no symptoms in Japan on March 2021. Its genome size was 1,656,785 bp, with 2 rRNAs, 35 tRNAs, and a coverage of 330×.

      • Bacterial pathogens
      • Campylobacter
  23. Genome-Wide Association Study of Campylobacter-Positive Diarrhea Identifies Genes Involved in Toxin Processing and Inflammatory Response

    • mBio
    • mBio, Ahead of Print. Diarrhea is responsible for the deaths of more than 500,000 children each year, many of whom reside in low-to-middle-income countries (LMICs). Additionally, children with multiple diarrheal infections early in life have increased growth stunting and malnutrition and decreased vaccine efficacy. Two bacteria that contribute to the burden of diarrhea are Campylobacter jejuni and Campylobacter coli, both are endemic in Bangladesh.

      • Bacterial pathogens
      • Campylobacter
  24. The Use of Disinfectant in Barn Cleaning Alters Microbial Composition and Increases Carriage of Campylobacter jejuni in Broiler Chickens

    • Applied and Environmental Microbiology
    • Applied and Environmental Microbiology, Volume 88, Issue 10, May 2022. To maintain food safety and flock health in broiler chicken production, biosecurity approaches to keep chicken barns free of pathogens are important. Canadian broiler chicken producers must deep clean their barns with chemical disinfectants at least once annually (full disinfection [FD]) and may wash with water (water wash [WW]) throughout the year.

      • Bacterial pathogens
      • Campylobacter
  25. Genomic Screening of Antimicrobial Resistance Markers in UK and US Campylobacter Isolates Highlights Stability of Resistance over an 18-Year Period

    • Antimicrobial Agents and Chemotherapy
    • Antimicrobial Agents and Chemotherapy, Volume 66, Issue 5, May 2022. Campylobacter jejuni and Campylobacter coli are important bacterial causes of human foodborne illness. Despite several years of reduced antibiotics usage in livestock production in the United Kingdom (UK) and United States (US), a high prevalence of antimicrobial resistance (AMR) persists in Campylobacter.

      • Bacterial pathogens
      • Campylobacter