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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 101 - 125 of 1666

  1. Effect of feed enzymes and functional immunostimulants supplementation on growth performance and overall health of postlarvae and juvenile Pacific white shrimp, Penaeus vannamei, fed soybean‐based diets

    • Journal of the World Aquaculture Society
    • Abstract Soybean meal (SBM) is widely used in shrimp feed agro‐industry as a fish meal (FM) replacement. However, high levels of SBM may compromise animal health as a result of nutrient imbalance.

      • Bacterial pathogens
      • Vibrio
  2. Environmental vibrio phage–bacteria interaction networks reflect the genetic structure of host populations

    • Environmental Microbiology
    • Abstract Phages depend on their bacterial hosts to replicate. The habitat, density and genetic diversity of host populations are therefore key factors in phage ecology, but our ability to explore their biology depends on the isolation of a diverse and representative collection of phages from different sources. Here, we compared two populations of marine bacterial hosts and their phages collected during a time series sampling program in an oyster farm.

      • Bacterial pathogens
      • Vibrio
  3. Quorum sensing signal synthases enhance Vibrio parahaemolyticus swarming motility

    • Molecular Microbiology
    • The quorum sensing (QS) and c‐di‐GMP signaling pathways are intricately intertwined to control swarming in Vibrio parahaemolyticus strain RIMD 2210633. The QS signals which inhibit LuxOvp phosphorylation are essential for V. parahaemolyticus to swarm efficiently on surfaces. And LuxOvp regulates swarming in a mechanism that involves modulating c‐di‐GMP levels, which may be intracellularly compartmentalized in V. parahaemolyticus.

      • Bacterial pathogens
      • Vibrio
  4. Effects of dietary spray‐dried porcine plasma (SDPP) on growth, digestive capability and diseases resistance of juvenile hybrid grouper Epinephelus lanceolatu × E. fuscoguttatus

    • Aquaculture Nutrition
    • Abstract Hybrid grouper (E. lanceolatu × E. fuscoguttatus) is a high economic value cultured species in Southeast Asia. There is a dangerous stage during its body length from 7 cm to 15 cm, and rotten fins and enteritis often occur in this period.

      • Bacterial pathogens
      • Vibrio
  5. High dietary lipid level decreases the immunity and disease resistance of abalone Haliotis discus hannai and affects the perilipin‐2/TLR4, JNK and Keap1/Nrf2 pathways

    • Aquaculture Nutrition
    • Abstract A 100‐day feeding trial was conducted to investigate the influences of dietary lipid levels on the immunity and mechanism in abalone Haliotis discus hannai Ino. Abalones (initial weight: 10.98 ± 0.05 g) were fed with graded levels of dietary lipid, which were 15.73, 23.41, 31.72, 38.25, 46.35, 55.63, 61.70 and 67.19 g/kg.

      • Bacterial pathogens
      • Vibrio
  6. Supplementing tributyrin to cottonseed protein concentrate‐based diets can improve growth performance, lipid metabolism and distal intestinal immunity in hybrid grouper (Epinephelus fuscoguttatus ♀ × Epinephelus lanceolatus ♂)

    • Aquaculture Nutrition
    • Abstract An 8‐week trial was performed to evaluate tributyrin effects on growth, disease resistance, lipid metabolizing, distal intestinal inflammation‐, tight junctions‐ and apoptosis‐related gene expressions caused by high‐level cottonseed protein concentrate (CPC) substitution of fishmeal. Fish were fed one fishmeal (50% fishmeal) and six CPC diets (27.5% fishmeal and 25.2% CPC).

      • Bacterial pathogens
      • Vibrio
  7. Yeast culture supplementation alters the performance and health status of juvenile largemouth bass (Micropterus salmoides) fed a high‐plant protein diet

    • Aquaculture Nutrition
    • Abstract The present study was conducted to investigate the effects of yeast culture on the growth, hepatic antioxidant capacity, intestinal barrier and microflora of fish fed a high‐cottonseed protein diet.

      • Bacterial pathogens
      • Vibrio
  8. Dietary supplementation of fish protein hydrolysate in high plant protein diets modulates growth, liver and kidney health, and immunity of barramundi (Lates calcarifer)

    • Aquaculture Nutrition
    • Abstract A 60‐day feeding trial was carried out to investigate the effects of fish protein hydrolysate (FPH) in high lupin meal (LM) diets on growth, health and immunity of barramundi. Fish were fed a fishmeal‐based control diet (FM) and three test diets to replace 75% fishmeal protein in the control diet by lupin meal alone (LM), lupin meal with FPH (LM+FPH) and fermented lupin meal with FPH supplementation (FLM+FPH).

      • Bacterial pathogens
      • Vibrio
  9. Effect of different rice transplanting patterns on microbial community in water, sediment, and Procambarus clarkii intestine in rice-crayfish system

    • Frontiers in Microbiology
    • Although the microbial ecology of integrated rice-crayfish farming systems is receiving increasing attention with the expanding application area in China, the effects of rice transplanting patterns on the microbial community of water, sediment and Procambarus clarkii intestine in rice-crayfish system has yet to be determined.

      • Bacterial pathogens
      • Vibrio
  10. Vibrio vulnificus mutation rate: an in vitro approach

    • Frontiers in Microbiology
    • Vibrio vulnificus is a multi-host pathogenic species currently subdivided into five phylogenetic lineages (L) plus one pathovar with the ability to infect fish due to a transmissible virulence plasmid. This plasmid (or a fragment of it) has been transmitted between lineages within the species, contributing to the evolution of V. vulnificus. This study aimed to provide an experimental approximation to the V.

      • Bacterial pathogens
      • Vibrio
  11. Extraction, identification, mechanism of action, and application of Hu Zhang (Polygonum cuspidatum) extracts against non-O1/O139 Vibrio cholerae in prawn storage

    • LWT
    • Plant-derived alternatives to antibiotics are of great concern. The goal of this work was to enhance the Hu Zhang (Polygonum cuspidatum) extraction procedure against non-O1/O139 V. cholerae (HZE), identify the antibacterial components, analyze the mechanism of action, and investigate its potential in prawn storage.

      • Bacterial pathogens
      • Vibrio
  12. Temporal variability of microbiome in the different plankton hosts revealed distinct environmental persistence of Vibrio parahaemolyticus in shrimp farms

    • Microbiological Research
    • Plankton-bacteria interactions may play essential roles in maintaining the persistence of pathogenic Vibrio spp. However, the actual plankton host of the toxigenic Vibrio parahaemolyticus that harbors thermostable direct hemolysin (TDH) and TDH-related hemolysin (TRH) remains unclear.

      • Bacterial pathogens
      • Vibrio
  13. The difference in the composition of gut microbiota is greater among bats of different phylogenies than among those with different dietary habits

    • Frontiers in Microbiology
    • Bats have a very long evolutionary history and are highly differentiated in their physiological functions. Results of recent studies suggest effects of some host factors (e.g., phylogeny and dietary habit) on their gut microbiota. In this study, we examined the gut microbial compositions of 18 different species of bats. Results showed that Firmicutes, Gammaproteobacteria, and Actinobacteria were dominant in all fecal samples of bats.

      • Bacterial pathogens
      • Vibrio
  14. Identification of the gut microbiota affecting Salmonella pullorum and their relationship with reproductive performance in hens

    • Frontiers in Microbiology
    • Introduction Pullorum disease is one of the common bacterial infectious diseases caused by Salmonella pullorum (S. pullorum), which can result in a decrease in the reproductive performance of laying hens, thus causing considerable economic losses. However, studies about the characteristics of intestinal microbiota with pullorum and their potential association with reproductive performance in hens are still limited. This study was to identify the gut microbiota associated with S.

      • Bacterial pathogens
      • Salmonella
      • Vibrio
  15. Modeling the Risk of Vibrio parahaemolyticus in Oysters in Taiwan by Considering Seasonal Variations, Time Periods, Climate Change Scenarios, and Post-Harvest Interventions

    • Microbial Risk Analysis
    • Vibrio parahaemolyticus is a halophilic gram-negative bacterium commonly found in marine environments, particularly in warm coastal waters. This pathogen has been reported as a common cause of foodborne illness associated with the consumption of raw or undercooked seafood. The presence and density of this bacterium in seafood are often associated with the climatological conditions of the marine environment.

      • Bacterial pathogens
      • Vibrio
  16. Effects of lactic acid bacteria isolated from Tibetan chickens on the growth performance and gut microbiota of broiler

    • Frontiers in Microbiology
    • Lactic acid bacteria (LAB) are organic supplements that have several advantages for the health of the host. Tibetan chickens are an ancient breed, which evolve unique gut microbiota due to their adaptation to the hypoxic environment of high altitude. However, knowledge of LAB isolated from Tibetan chickens is very limited.

      • Bacterial pathogens
      • Vibrio
  17. Improvement of growth, yield and associated bacteriome of rice by the application of probiotic Paraburkholderia and Delftia

    • Frontiers in Microbiology
    • Plant probiotic bacteria enhance growth and yield of crop plants when applied at the appropriate time and dose. Two rice probiotic bacteria, Paraburkholderia fungorum strain BRRh-4 and Delftia sp. strain BTL-M2 promote growth and yield of plants. However, no information is available on application of these two bacteria on growth, yield, and diversity and population of bacteriome in roots and rhizosphere soils of the treated rice plants.

      • Bacterial pathogens
      • Vibrio
  18. Novel next generation sequencing panel method for the multiple detection and identification of foodborne pathogens in agricultural wastewater

    • Frontiers in Microbiology
    • Detecting and identifying the origins of foodborne pathogen outbreaks is a challenging. The Next-Generation Sequencing (NGS) panel method offers a potential solution by enabling efficient screening and identification of various bacteria in one reaction.

      • Bacterial pathogens
      • Bacillus cereus
      • Staphylococcus aureus
      • Vibrio
      • Yersinia
  19. Microbiological quality, antibiotic resistant bacteria and relevant resistance genes in ready-to-eat Pacific oysters (Magallana gigas)

    • FEMS Microbiology Letters
    • Oysters are a highly valued seafood but can endanger public health, if they are eaten raw or barely cooked. We evaluated the microbiological quality of Pacific oysters (Magallana gigas) by international standard methods in four groups (each with four to five animals) acquired from supermarkets and directly from a farm producer. Most of the groups presented satisfactory microbiological quality.

      • Bacterial pathogens
      • Salmonella
      • Shigella
      • Staphylococcus aureus
      • Vibrio
  20. Clinical features and treatment outcomes of Vibrio vulnificus infection in the coastal city of Ningbo, China

    • Frontiers in Microbiology
    • Background

      Vibrio vulnificus is a gram-negative, opportunistic pathogen common to warm waters worldwide. Human V. vulnificus infection is rare and typically affects those residing in coastal areas during the summer months, but it causes rapid deterioration and is fatal.

      Methods

      • Bacterial pathogens
      • Vibrio
  21. Epidemiological characteristics of Vibrio parahaemolyticus outbreaks, Zhejiang, China, 2010–2022

    • Frontiers in Microbiology
    • Background Vibrio parahaemolyticus is one of the most common foodborne pathogens and poses a significant disease burden.

      • Bacterial pathogens
      • Vibrio
  22. Sole microbiome progression in a hatchery life cycle, from egg to juvenile

    • Frontiers in Microbiology
    • Recirculating aquaculture systems (RAS) pose unique challenges in microbial community management since they rely on a stable community with key target groups, both in the RAS environment and in the host (in this case, Solea senegalensis).

      • Bacterial pathogens
      • Vibrio
  23. The Hippo-Yki pathway downstream transcription factor Scalloped negatively regulates immune defense against Vibrio parahaemolyticus infection in shrimp

  24. The first reporting of prevalence Vibrio species and expression of HSP genes in rayed pearl oyster (Pinctada radiata) under thermal conditions

    • Fish & Shellfish Immunology
    • The main goal of the present study was to evaluate the influence of thermal exposure on Vibrio population and HSP genes expression (HSP 90, HSP70, and HSP20) in rayed pearl oyster (P. radiata). To this end, the oysters were reared for 30 days at temperatures of 22 °C (control), 25 °C, 27 °C, and 29 °C. The results showed that five dominate Vibrio strains including Vibrio hepatariusV. harveyiV.

      • Bacterial pathogens
      • Vibrio
  25. Moderate organic fertilizer substitution for partial chemical fertilizer improved soil microbial carbon source utilization and bacterial community composition in rain-fed wheat fields: current year

    • Frontiers in Microbiology
    • Organic fertilizers can partially replace chemical fertilizers to improve agricultural production and reduce negative environmental impacts.

      • Bacterial pathogens
      • Vibrio