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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 151 - 175 of 2089

  1. Host cell-dependent late entry step as determinant of Hepatitis B virus infection

    • PLOS Pathogens
    • by Xupeng Hong, Yuka Imamura Kawasawa, Stephan Menne, Jianming Hu Hepatitis B virus (HBV) has a highly restricted host range and cell tropism. Other than the human sodium taurocholate cotransporting polypeptide (huNTCP), the HBV entry receptor, host determinants of HBV susceptibility are poorly understood. Woodchucks are naturally infected with woodchuck hepatitis virus (WHV), closely related to HBV, but not with HBV.

      • Viruses
      • Hepatitis
  2. Potential impact of gut Lactobacillus acidophilus and Bifidobacterium bifidum on hepatic histopathological changes in non-cirrhotic hepatitis C virus patients with different viral load

    • Gut Pathogens
    • Background

      Composition of gut microbiota has recently been suggested as a key factor persuading the pathogenesis of numerous human diseases including hepatic cirrhosis.

      Objective

      • Viruses
      • Hepatitis
  3. Hunting down the cause of acute hepatitis in children

    • The Lancet
      • Viruses
      • Hepatitis
  4. National Landscape of Human Immunodeficiency Virus–Positive Deceased Organ Donors in the United States

    • Clinical Infectious Diseases
    • Background Organ transplantation from donors with human immunodeficiency virus (HIV) to recipients with HIV (HIV D+/R+) presents risks of donor-derived infections. Understanding clinical, immunologic, and virologic characteristics of HIV-positive donors is critical for safety.

      • Viruses
      • Hepatitis
  5. Pradefovir Treatment in Patients With Chronic Hepatitis B: Week 24 Results From a Multicenter, Double-Blind, Randomized, Noninferiority, Phase 2 Trial

    • Clinical Infectious Diseases
    • Background Pradefovir is a liver-targeted prodrug of adefovir, a nucleoside/nucleotide analogue with antiviral activity against hepatitis B virus (HBV) DNA polymerase. This phase 2 study compared the efficacy and safety of oral pradefovir (30, 45, 60, or 75 mg) versus tenofovir disoproxil fumarate (TDF; 300 mg) and aimed to identify the most appropriate dose of pradefovir for the forthcoming phase 3 study.

      • Viruses
      • Hepatitis
  6. Enteric Illness Outbreaks Reported Through the National Outbreak Reporting System—United States, 2009–2019

    • Clinical Infectious Diseases
    • Background The National Outbreak Reporting System (NORS) captures data on foodborne, waterborne, and enteric illness outbreaks in the United States. This study describes enteric illness outbreaks reported during 11 years of surveillance. Methods We extracted finalized reports from NORS for outbreaks occurring during 2009–2019.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Shigella
      • Viruses
      • Norovirus
  7. Evolution of Fatty Liver Disease and Relationship With Lipoproteins and Clinical Outcomes in Hepatitis B/Human Immunodeficiency Virus Coinfection

    • Clinical Infectious Diseases
    • Background Fatty liver disease (FLD) and hepatitis B virus (HBV) infection occur commonly in human immunodeficiency virus (HIV). FLD resolution is associated with improvement in lipoproteins in HIV-uninfected patients. We evaluated changes in FLD in an HBV/HIV-coinfected cohort. Methods One hundred eight HBV/HIV-coinfected adults with baseline liver biopsies were followed every 24 weeks (median, 166 weeks) and 60 had follow-up biopsies.

      • Viruses
      • Hepatitis
  8. Use of Human Intestinal Enteroids to Evaluate Persistence of Infectious Human Norovirus in Seawater

    • Emerging Infectious Diseases
    • Little data on the persistence of human norovirus infectivity are available to predict its transmissibility. Using human intestinal enteroids, we demonstrate that 2 human norovirus strains can remain infectious for several weeks in seawater. Such experiments can improve understanding of factors associated with norovirus survival in coastal waters and shellfish.

      • Viruses
      • Norovirus
  9. Hepatitis E virus genotype 3 microbiological surveillance by the Spanish Reference Laboratory: geographic distribution and phylogenetic analysis of subtypes from 2009 to 2019

    • Eurosurveillance
    • Background

      Hepatitis E virus genotype 3 (HEV-3) is widely distributed throughout Europe, with incidence of infections increasing in many countries. Belgium, Bulgaria, France, Germany, Italy, the Netherlands and the United Kingdom have reported the distribution of HEV-3 subtypes in cohorts of patients with hepatic disease.

      Aim

      • Viruses
      • Hepatitis
  10. Isolation of 15 hepatitis E virus strains lacking ORF1 rearrangements from wild boar and pig organ samples and efficient replication in cell culture

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. As a zoonotic pathogen, the hepatitis E virus (HEV) leads to numerous infections in humans with different clinical manifestations. Especially genotype 3, as causative agent of a foodborne zoonosis, is transmitted to humans by ingestion of undercooked or raw meat containing liver from HEV infected animals.

      • Viruses
      • Hepatitis
  11. Gut Microbiome Signatures in the Progression of Hepatitis B Virus-Induced Liver Disease

    • Frontiers in Microbiology
    • The gut microbiome is associated with hepatitis B virus (HBV)-induced liver disease, which progresses from chronic hepatitis B, to liver cirrhosis, and eventually to hepatocellular carcinoma. Studies have analyzed the gut microbiome at each stage of HBV-induced liver diseases, but a consensus has not been reached on the microbial signatures across these stages.

      • Viruses
      • Hepatitis
  12. Nup98 Is Subverted from Annulate Lamellae by Hepatitis C Virus Core Protein to Foster Viral Assembly

    • mBio
    • mBio, Volume 13, Issue 2, April 2022. Nup98, an essential component of the nuclear pore that also participates in annulate lamella pore structures localized in the cytosol, is involved in hepatitis C virus (HCV) assembly. Here, we combined confocal microscopy and biochemical assays to study the interplay between Nup98, core (i.e., the HCV capsid protein), and viral genomes.

      • Viruses
      • Hepatitis
  13. CRISPR-Cas9 Targeting of Hepatitis B Virus Covalently Closed Circular DNA Generates Transcriptionally Active Episomal Variants

    • mBio
    • mBio, Volume 13, Issue 2, April 2022. Chronic hepatitis B virus (HBV) infection persists due to the lack of therapies that effectively target the HBV covalently closed circular DNA (cccDNA). We used HBV-specific guide RNAs (gRNAs) and CRISPR-Cas9 and determined the fate of cccDNA after gene editing. We set up a ribonucleoprotein (RNP) delivery system in HBV-infected HepG2-NTCP cells. HBV parameters after Cas9 editing were analyzed.

      • Viruses
      • Hepatitis
  14. Antiviral Activity of Olanexidine-Containing Hand Rub against Human Noroviruses

    • mBio
    • mBio, Volume 13, Issue 2, April 2022. Human norovirus (HuNoV) is the leading cause of epidemic and sporadic acute gastroenteritis worldwide. HuNoV transmission occurs predominantly by direct person-to-person contact, and its health burden is associated with poor hand hygiene and a lack of effective antiseptics and disinfectants.

      • Viruses
      • Norovirus
  15. Novel Neplanocin A Derivatives as Selective Inhibitors of Hepatitis B Virus with a Unique Mechanism of Action

    • Antimicrobial Agents and Chemotherapy
    • Antimicrobial Agents and Chemotherapy, Ahead of Print. Novel neplanocin A derivatives have been identified as potent and selective inhibitors of hepatitis B virus (HBV) replication in vitro. These include (1S,2R,5R)-5-(5-bromo-4-methyl-7H-pyrrolo[2,3-d]-pyrimidin-7-yl)-3-(hydroxymethyl)cyclopent-3-ene-1,2-diol (AR-II-04-26) and (1S,2R,5R)-5-(4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)-3-(hydroxylmethyl)cyclopent-3-ene-1,2-diol (MK-III-02-03).

      • Viruses
      • Hepatitis
  16. Safety, Tolerability, and Pharmacokinetics of the Novel Hepatitis B Virus Expression Inhibitor GST-HG131 in Healthy Chinese Subjects: a First-in-Human Single- and Multiple-Dose Escalation Trial

    • Antimicrobial Agents and Chemotherapy
    • Antimicrobial Agents and Chemotherapy, Volume 66, Issue 5, May 2022. GST-HG131, a novel dihydroquinolizinone (DHQ) compound, has been shown to reduce circulating levels of HBsAg in animals. This first-in-human trial evaluated the safety, tolerability, and pharmacokinetic profile of GST-HG131 in healthy Chinese subjects. This was a double-blind, randomized, placebo-controlled phase Ia clinical trial that was conducted in two parts.

      • Viruses
      • Hepatitis
  17. Curcumin combined with Baicalin attenuated ethanol-induced hepatitis by suppressing p38 MAPK and TSC1/ eIF-2α/ATF4 pathways in rats

    • Food Bioscience
    • Author(s): Xiaoxia Wang, Xuhong Chang, Haibing Zhan, Chengyun Li, Qiong Zhang, Sheng Li, Yingbiao Sun. Autophagy activation is one of the survival mechanisms of ethanol-induced hepatitis in mammals. Both Curcumin and Baicalin have anti-inflammatory effects, but the mechanism of their combined action in ethanol-induced hepatitis is still unclear.

      • Viruses
      • Hepatitis
  18. Seroprevalence of hepatitis E virus infection in the Americas: Estimates from a systematic review and meta-analysis

    • PLOS ONE
    • by Nathalie Verónica Fernández Villalobos, Barbora Kessel, Isti Rodiah, Jördis Jennifer Ott, Berit Lange, Gérard Krause Background Hepatitis E virus (HEV) infection is responsible for inflammatory liver disease and can cause severe health problems.

      • Viruses
      • Hepatitis
  19. Identification of Liver and Plasma microRNAs in Chronic Hepatitis B Virus infection

    • Frontiers in Cellular and Infection Microbiology
    • Background and Aims With current standard of care a functional cure for Chronic Hepatitis B (CHB) is only achieved in 1-3% of patients and therefore novel therapies are needed. Disease activity during CHB can be determined by a broad range of virological biomarkers, however these biomarkers are also targets for novel treatment strategies.

      • Viruses
      • Hepatitis
  20. Method for detecting norovirus, hepatitis A and hepatitis E viruses in tap and bottled drinking water

    • International Journal of Food Microbiology
    • Viruses are a leading cause of foodborne disease worldwide. Human norovirus and hepatitis viruses (hepatitis A (HAV) and hepatitis E (HEV)) are recognised to be the main viruses of importance to public health. The ISO 15216 procedure describes molecular methods for detecting HAV and norovirus in bottled water by using an electropositive filter to concentrate viruses.

      • Viruses
      • Hepatitis
      • Norovirus
  21. Temperature, Time, and Type, Oh My! Key Environmental Factors Impacting the Recovery of Salmonella Typhimurium, Listeria monocytogenes, and Tulane Virus from Surfaces

    • Environmental monitoring (EM) programs are designed to detect the presence of pathogens in food manufacturing environments with the goal of preventing microbial contamination of food. Nevertheless, limited knowledge exists regarding the influence of environmental conditions on microbial recovery during EM. This study utilizes a commercially-available polyurethane foam (PUF) EM tool to determine the influence of environmental factors on the recovery of foodborne pathogens.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
      • Viruses
      • Norovirus
  22. Novel subtypes and unexpected heterogeneity of hepatitis E viral strains in wild boar captured in a small area in Central Italy

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Accepted Article. Wild boar is the main sylvatic reservoir of the genotype 3 of hepatitis E virus (HEV). The occurrence of HEV-3 human cases has been linked to the consumption of raw or undercooked pig and wild boar meat and liver. The zoonotic transmission of HEV-3 has been confirmed by sequencing identical or strictly related viral strains in humans, wild boar, and derived food.

      • Viruses
      • Hepatitis
  23. Persistent cryoglobulinemia after antiviral treatment is associated with advanced fibrosis in chronic hepatitis C patients

    • PLOS ONE
    • by Batbold Batsaikhan, Ching-I. Huang, Ming-Lun Yeh, Chung-Feng Huang, Yi-Hung Lin, Po-Cheng Liang, Ming-Yen Hsieh, Yi-Ching Lin, Jee-Fu Huang, Wan-Long Chuang, Jin-Ching Lee, Ming-Lung Yu, Hsing-Tao Kuo, Chia-Yen Dai Background High dosage and longer duration of antiviral treatment has been suggested to treat cryoglobulinemia patients.

      • Viruses
      • Hepatitis
  24. The use of technology-based adherence monitoring in the treatment of hepatitis C virus

    • Therapeutic Advances in Infectious Disease
    • Direct-acting antivirals (DAAs) achieve high hepatitis C virus (HCV) cure rates and are forgiving to missed doses, but adherence–efficacy relationships have not been well defined. Traditional adherence measures (e.g. pill counts, self-report and pharmacy refills) over-estimate medication adherence. Newer technology-based tools have been used to provide more objective adherence data.

      • Viruses
      • Hepatitis
  25. The First Evidence of Zoonotic Hepatitis E Virus (HEV) Exposure in Domestic Cats in Türkiye

    • Comparative Immunology, Microbiology and Infectious Diseases
    • Hepatitis E virus (HEV) infection as a zoonotic disease virus has been thoroughly investigated in pigs around the world, but there have been few studies in pet animals. Although molecula and serological evidence suggests that numerous other animal species may act as HEV hosts in industrialized countries, domestic pigs and wild boars are the main reservoirs of HEV genotypes 3 and 4 for human infections.

      • Viruses
      • Hepatitis