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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 101 - 125 of 3115

  1. Occurrence and Antimicrobial Resistance among Staphylococci Isolated from the Skin Microbiota of Healthy Goats and Sheep

    • Antibiotics
    • Staphylococci colonize the skin and mucous membranes of different animals. The purpose of this study was to determine the staphylococcal composition of the skin microbiota of healthy, non-vet visiting, and antimicrobially non-treated sheep and goats. In total, 83 strains (44 from goats and 39 from sheep) were isolated and identified using matrix-assisted laser desorption ionization time of flight mass spectrometry (MALDI-TOF MS).

      • Bacterial pathogens
      • Staphylococcus aureus
  2. Characterization of Staphylococcus Species Isolates from Sheep Milk with Subclinical Mastitis: Antibiotic Resistance, Enterotoxins, and Biofilm Production

    • Foodborne Pathogens and Disease
    • Subclinical mastitis represents one of the most contagious diseases affecting animals involved in dairy production systems. Although coagulase-negative staphylococci (CoNSs) have been considered minor pathogens for many years, they have recently emerged as opportunistic pathogens in mastitis disorders.

      • Bacterial pathogens
      • Staphylococcus aureus
  3. A Single-Laboratory Performance Evaluation of MALDI-TOF MS in Rapid Identification of Staphylococcus aureus, Cronobacter sakazakii, Vibrio parahaemolyticus, and Some Closely Related Bacterial Species of Public Health Importance

    • Journal of AOAC INTERNATIONAL
    • Background Staphylococcus is a genus of Gram-positive bacteria, known to cause food poisoning and gastrointestinal illness in humans. Additionally, the emergence of methicillin-resistant S. aureus (MRSA) strains has caused a major health care burden worldwide. Cronobacter is a group of Gram-negative bacteria that can survive in extreme dry conditions. Cronobacter sakazakii is known to contaminate powdered infant formula and cause life-threatening infections in neonates.

      • Bacterial pathogens
      • Cronobacter
      • Staphylococcus aureus
      • Vibrio
  4. Antimicrobial Resistance Profiles of Staphylococcus Isolated from Cows with Subclinical Mastitis: Do Strains from the Environment and from Humans Contribute to the Dissemination of Resistance among Bacteria on Dairy Farms in Colombia?

    • Antibiotics
    • Staphylococcus is a very prevalent etiologic agent of bovine mastitis, and antibiotic resistance contributes to the successful colonization and dissemination of these bacteria in different environments and hosts on dairy farms. This study aimed to identify the antimicrobial resistance (AMR) genotypes and phenotypes of Staphylococcus spp. isolates from different sources on dairy farms and their relationship with the use of antibiotics.

      • Bacterial pathogens
      • Staphylococcus aureus
  5. Characterisation of Staphylococcus aureus isolated from artisanal unripened cheeses produced in São Paulo State, Brazil

    • International Dairy Journal
    • The capacity for biofilm formation andslime production, the enterotoxigenic potential and the molecular typing of 20 Staphylococcus aureus isolated from minas frescal and Porungo cheeses was evaluated. Profiles obtained by Rep-PCR enabled the isolates to be grouped into two major subgroups. All S. aureus isolates were capable of forming biofilms, with the majority falling under the category of strong biofilm formers.

      • Bacterial pathogens
      • Staphylococcus aureus
  6. Napthyridine-derived compounds as promising inhibitors for Staphylococcus aureus CrtM: a primer for the discovery of potential anti-Staphylococcus aureus agents

    • Frontiers in Microbiology
    • The disease-free existence of humans is constantly under attack by a variety of infections caused by a variety of organisms including bacteria. Notable among the bacteria is Staphylococcus aureus which is an etiological organism for infections including impetigo, folliculitis, and furuncles. The response of the human immune system against this disease is often neutralized by the production of a pigment called Staphyloxanthin (STX) via a series of reactions mediated by several enzymes.

      • Bacterial pathogens
      • Staphylococcus aureus
  7. Comparison of non-aureus staphylococcal and mammaliicoccal species found in both composite milk and bulk-tank milk samples of dairy cows collected in tandem

    • Journal of Dairy Science
    • Non-aureus staphylococci and the closely related mammaliicoccal species (NASM) are the most common causes of bovine subclinical mastitis on modern dairy farms and are highly prevalent in bulk-tank milk.

      • Bacterial pathogens
      • Staphylococcus aureus
  8. Distribution and prevalence of enterotoxigenic Staphylococcus aureus and staphylococcal enterotoxins in raw ruminants’ milk: A systematic review

    • Food Microbiology
    • Enterotoxins produced by Staphylococcus aureus are a common cause of food poisoning, leading to significant gastrointestinal symptoms and even hospitalization. Following the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines, we searched three electronic databases for studies on detection of staphylococcal enterotoxins or enterotoxigenic S. aureus in raw ruminant milk.

      • Bacterial pathogens
      • Staphylococcus aureus
  9. Draft genome sequence of Staphylococcus gallinarum MTR_B001 strain isolated from breast muscle of a chicken in Bangladesh

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. We announce the genome sequence of the Staphylococcus gallinarum MTR_B001 strain isolated from the breast muscle of a chicken in 2022 in Bangladesh. This assembled genome had an estimated length of 2,889,393 bp (with 50× genome coverage), 15 contigs, 36 predicted antibiotic resistance genes, and 27 predicted virulence factor genes.

      • Bacterial pathogens
      • Staphylococcus aureus
  10. Modelling the kinetics of Staphylococcus aureus in goat's raw milk under different sub-pasteurisation temperatures

    • Microbial Risk Analysis
    • In this study, the heat resistance of S. aureus in goats’ raw milk subjected to thermisation temperatures was characterised through tests at various temperatures and modelling the survival curves using the Weibull model, through a two-step and an omnibus approach, which can model a full dataset covering all experimental conditions in one step. The fitting capacity of the secondary models obtained from the two-step approach was reasonable (adj.

      • Bacterial pathogens
      • Staphylococcus aureus
  11. TMT-labeled quantitative proteomic reveals the mechanism of proteolysis and taste improvement of dry-cured bacon with Staphylococcus co-inoculation

    • Food Chemistry
    • To understand the mechanism of co-inoculation of Staphylococcus xylosus and Staphylococcus vitulinus (SX & SV) on structural protein degradation and taste enhancement of dry-cured bacon, protease activities, protein degradation, surface morphology of proteins and taste parameters of dry-cured bacon with Staphylococcus inoculation were investigated.

      • Bacterial pathogens
      • Staphylococcus aureus
  12. Four novel bacteriophages from slaughterhouse: Their potency on control of biofilm-forming MDR S. aureus in beef model

    • Food Control
    • This study was designed to isolate and characterize novel lytic phages specific to Staphylococcus aureus (S. aureus) from wastewater samples, determine their antimicrobial and antibiofilm activities, and investigate the biocontrol efficiency of phages on raw beef contaminated with S. aureus. For this purpose, a total of 50 wastewaters from slaughterhouses were used as material, and phages were isolated with the double-layer agar method.

      • Bacterial pathogens
      • Staphylococcus aureus
  13. Chemical extraction, characterization, and inspection of the antimicrobial and antibiofilm activities of shrimp chitosan against foodborne fungi and bacteria

    • World Journal of Microbiology and Biotechnology
    • Nowadays, the exploitation of biopolymers in the industrial sector has become a trend. Chitosan is considered one of the most investigated biopolymers due to its abundance and antibacterial, antifungal, and antibiofilm activities. In this work, chitosan was chemically extracted from shrimp shells. Solutions of HCl 1 M, NaOH 4 M, and NaOH 15 M were used for the demineralization, deproteinization, and deacetylation process, respectively.

      • Bacterial pathogens
      • Staphylococcus aureus
  14. Modeling the combined resistance to microwave treatments and salt conditions of Escherichia coli and Staphylococcus aureus

    • Food Science and Technology International
    • In the present study, the efficiency of the combined effect of microwave irradiation treatments together with salt concentration was assessed against Escherichia coli and Staphylococcus aureus. Microbial survival has been modeled through a one-step Weibull equation considering the non-isothermal profiles during the heating treatments. Three sodium chloride concentrations 0.5%, 3.5%, and 8.5% (w/v) treated under three microwave power levels (450, 600, and 800 W) were studied.

      • Bacterial pathogens
      • Staphylococcus aureus
  15. Genomic Insights into Methicillin-Resistant Staphylococci and Mammaliicocci from Bulk Tank Milk of Dairy Farms in Serbia

    • Antibiotics
    • The potential risk to human and animal health provides a rationale for research on methicillin-resistant staphylococci (MRS) and mammaliicocci (MRM) in dairy herds. Here, we aimed to estimate their occurrence in the bulk tank milk (BTM) samples collected in 2019–2021 from 283 bovine dairy farms in the Belgrade district. We used whole-genome sequencing to characterize the obtained isolates and assess their genetic relatedness.

      • Bacterial pathogens
      • Staphylococcus aureus
  16. An observational study of the presence and variability of the microbiota composition of goat herd milk related to mainstream and artisanal farm management

    • PLOS ONE
    • by Rita A. H. Hoving-Bolink, Adriaan F. G. Antonis, Marinus F. W. te Pas, Dirkjan Schokker Goat milk is produced on mainstream and artisanal farms. It was expected that the farm management may influence the microbial population of the milk. Therefore, we investigated the bacterial content and microbiota composition of raw milk in relation to Dutch goat farm management.

      • Bacterial pathogens
      • Staphylococcus aureus
  17. A comprehensive review of the applications of bacteriophage-derived endolysins for foodborne bacterial pathogens and food safety: recent advances, challenges, and future perspective

    • Frontiers in Microbiology
    • Foodborne diseases are caused by food contaminated by pathogenic bacteria such as Escherichia coli, Salmonella, Staphylococcus aureus, Listeria monocytogenes, Campylobacter, and Clostridium, a critical threat to human health. As a novel antibacterial agent against foodborne pathogens, endolysins are peptidoglycan hydrolases encoded by bacteriophages that lyse bacterial cells by targeting their cell wall, notably in Gram-positive bacteria due to their naturally exposed peptidoglycan layer.

      • Bacterial pathogens
      • Campylobacter
      • Listeria monocytogenes
      • Salmonella
      • Staphylococcus aureus
  18. Within-Host Diversity of Coagulase-Negative Staphylococci Resistome from Healthy Pigs and Pig Farmers, with the Detection of cfr-Carrying Strains and MDR-S. borealis

    • Antibiotics
    • The ecology and diversity of resistome in coagulase-negative staphylococci (CoNS) from healthy pigs and pig farmers are rarely available as most studies focused on the livestock-associated methicillin-resistant S. aureus.

      • Bacterial pathogens
      • Staphylococcus aureus
  19. The Clinical Efficacy of Multidose Oritavancin: A Systematic Review

    • Antibiotics
    • Oritavancin (ORI) is a semisynthetic lipoglycopeptide approved as a single 1200 mg dose intravenous infusion for the treatment of acute bacterial skin and skin structure infections (ABSSSIs) caused by Gram-positive organisms in adults. The pharmacokinetic/pharmacodynamic (PK/PD) linear kinetic profile and long terminal half-life (~393 h) of ORI make it therapeutically attractive for the treatment of other Gram-positive infections for which prolonged therapy is needed.

      • Bacterial pathogens
      • Staphylococcus aureus
  20. Draft genome sequences of four Staphylococcus hyicus strains, SC302, SC304, SC306, and SC310, isolated from swine from Eastern Canada

    • Microbiology Resource Announcements
    • Microbiology Resource Announcements, Ahead of Print. The bacterium Staphylococcus hyicus causes porcine exudative epidermitis in piglets, which represents both health and welfare concerns. Few genome sequences of this pathogen are published. We provide four additional ones to help future genomic analysis of S. hyicus. These are genomes of strains isolated from Canadian swine.

      • Bacterial pathogens
      • Staphylococcus aureus
  21. Genomic insights into antimicrobial potential and optimization of fermentation conditions of pig-derived Bacillus subtilis BS21

    • Frontiers in Microbiology
    • Bacillus spp. have been widely used as probiotic supplements in animal feed as alternatives to antibiotics. In the present study, we screened a Bacillus subtilis strain named BS21 from pig feces. Antimicrobial activities, whole genome mining and UHPLC-MS/MS analysis were used to explore its antimicrobial mechanism.

      • Bacterial pathogens
      • Salmonella
      • Shigella
      • Staphylococcus aureus
  22. Study of chemical constituents, antioxidants and antimicrobial activities of Tamarindus indica L. seed

    • Journal of Food Science
    • Abstract The fruits of Tamarindus indica L. are consumed worldwide, with various parts of the plant being used for medicinal purposes. The residues (pericarp and seeds) generated during cellulose processing are of significant value as they contain bioactive compounds with diverse biological activities.

      • Bacterial pathogens
      • Bacillus cereus
      • Salmonella
      • Staphylococcus aureus
  23. Identification of staphyloxanthin and derivates in yellow-pigmented Staphylococcus capitis subsp. capitis

    • Frontiers in Microbiology
    • Introduction Staphylococcus capitis naturally colonizes the human skin but as an opportunistic pathogen, it can also cause biofilm-associated infections and bloodstream infections in newborns. Previously, we found that two strains from the subspecies S. capitis subsp. capitis produce yellow carotenoids despite the initial species description, reporting this subspecies as non-pigmented.

      • Bacterial pathogens
      • Staphylococcus aureus
  24. Improving the aroma profile of inoculated fermented sausages by constructing a synthetic core microbial community

    • Journal of Food Science
    • Abstract Commercial starter cultures play a critical role in the industrial production of fermented sausages. However, commercial starter cultures could not reproduce the metabolic actions of diverse microorganisms and the aroma profile of the traditional spontaneously fermented sausages.

      • Bacterial pathogens
      • Staphylococcus aureus
  25. Exploring the potential of ume-derived proanthocyanidins: novel applications for blueberry preservation

    • Frontiers in Microbiology
    • Proanthocyanidins (PCs) extracted from ume have many well-known functional properties. The aim of this study was to explore a novel natural food preservative using ume plum pulp proanthocyanidins (UPPP). The crude product of PCs from ume plum was obtained by using ethanol as extraction solvent and ultrasonic-assisted extraction, and then the pure product of UPPP was obtained by purification with AB-8 resin.

      • Bacterial pathogens
      • Staphylococcus aureus
      • Produce Safety
      • Leafy Greens