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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 411

  1. Population characteristics of pathogenic Escherichia coli in puerperal metritis of dairy cows in Ningxia region of China: a systemic taxa distribution of virulence factors and drug resistance genes

    • Frontiers in Microbiology
    • Escherichia coli (E. coli) is closely associated with the occurrence of puerperal metritis in dairy cows. E. coli carries some the virulence and multi-drug resistant genes, which pose a serious threat to the health of postpartum cows. In this study, E. coli was isolated and identified from the uterine contents of postpartum cows with puerperal metritis in the Ningxia region of China, and its phylogenetic subgroups were determined. Meanwhile, virulence and drug resistance genes carried by E.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  2. Label-free and sensitive fluorescent detection of Escherichia coli O157: H7 in milk based on cascade strand displacement amplification and G-quadruplex-thioflavin T

    • Food Control
    • The development of a simple, rapid, sensitive, and accurate method for detecting Escherichia coli O157:H7 in complex matrices is critical for ensuring food safety. In this study, a fluorescent biosensor employing aptamer (Apt) -functionalized magnetic beads and cascade strand displacement amplification (SDA) was devised for the detection of E. coli O157:H7 in milk samples. E.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  3. Evaluating the Safety of Sous-Vide Cooking for Beef Products Inoculated with Single Strains of Salmonella enterica and Escherichia coli O157

    • Journal of Food Protection
    • Sous-vide cooking is a growing trend among retailers and consumers. Foodborne pathogens may survive the cooking if non-validated parameters are used or if pathogens have enhanced thermal resistance. Pathogen inactivation from sous-vide cooking was determined when introduced directly to beef products or via contaminated spices, and with or without a finishing step.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Salmonella
  4. Integrating pastured meat chickens into organic vegetable production increased nitrogen and microbial biomass with variability in presence of E. coli and Salmonella spp

    • Renewable Agriculture and Food Systems
    • Integrating animals into a farm supports a closed or semi-closed production system where nutrients are recycled and off-farm inputs are reduced. In comparison to other livestock, chickens can be a low-investment option for animal-crop integration of small-scale, diversified, vegetable farms.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Salmonella
  5. Persistence comparison of two Shiga-toxin producing Escherichia coli (STEC) serovars during long-term storage and thermal inactivation in various wheat flours

    • PLOS ONE
    • by Ian S. Hines, Tom Jurkiw, Emily Nguyen, Martine Ferguson, Sultana Solaiman, Elizabeth Reed, Maria Hoffmann, Jie Zheng Foodborne outbreaks associated with Shiga toxin-producing Escherichia coli (STEC) contaminated wheat flour have been an increasing food safety concern in recent decades. However, there is little literature aimed at investigating the impact of different flour types on the persistence of STEC during storage and thermal inactivation.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  6. 85 Evaluation of a Saccharomyces cerevisiae fermentation product on performance, plasma metabolites, rumen parameters, and fecal pathogen shedding in feedlot steers

    • Journal of Animal Science
    • The objective of the experiment was to evaluate a commercial Saccharomyces cerevisiae fermentation product (SCFP; NaturSafe, Dimond V, Cedar Rapids, IA) on performance, plasma metabolites, rumen parameters, and fecal pathogen shedding in feedlot steers. Crossbred steers (n = 61; 271 ± 48.1 kg) were sourced from 3 different research units at Oklahoma State University and assigned to 1 of 3 experimental treatments in a randomized complete block design.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
      • Salmonella
  7. Dramatic fluorescence enhancement of PCN-224 and its application in “turn off” immunoassay for sensitive detection of E. coli O157:H7 in milk

    • Food Chemistry
    • In this study, a type of luminescent porous coordination network-224 (PCN-224) in alkaline conditions was synthesized with the dramatic fluorescence enhancement by 20.4 times, which was explained by the fact that the decrease of Zr4+ content in alkaline conditions resulted in the partial recovery of the electron cloud density of 4,4′,4′′,4′′′-(Porphine-5,10,15,20-tetrayl) tetrakis(benzoic acid) (TCPP).

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  8. Identification and characterization of lettuce cultivars with high inhibitory activity against the human pathogen Escherichia coli O157:H7: Toward a plant-intrinsic hurdle approach to microbial safety

    • Postharvest Biology and Technology
    • Foodborne illness linked to fruit and vegetables poses a major challenge to public health and horticulture production. Processed lettuce has been implicated in recurrent outbreaks of pathogenic Shiga toxin-producing Escherichia coli (STEC) infection. We hypothesized that plant defenses elicited by mechanical injury may effect STEC inhibition in cut leaves.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  9. Preparation and antibacterial performance of bacterial nanocellulose sachet containing Zataria multiflora essential oil loaded halloysite nanotubes on Escherichia coli O157:H7 in cheese

    • LWT
    • This study aimed to develop antimicrobial sachets by encapsulating Zataria multiflora essential oil (ZMEO) within halloysite nanotubes (HNTs) at different mass ratios (3:1, 2:1, and 1:1) and incorporating them into bacterial nanocellulose (BNC) films at two concentrations (10 % and 20 %) for cheese applications.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  10. Minimizing Escherichia coli O157:H7 contamination in indoor farming: effects of cultivar type and ultra‐violet light quality

    • Journal of the Science of Food and Agriculture
    • Abstract BACKGROUND Bacterial contamination of produce is a concern in indoor farming due to close plant spacing, recycling irrigation, warm temperatures, and high relative humidity during production. Cultivars that inherently resist contamination and photo‐sanitization using ultraviolet (UV) radiation during the production phase can reduce bacterial contamination. However, there is limited information to support their use in indoor farming.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
  11. Effect of ground beef irradiation on annual nontyphoidal Salmonella and Escherichia coli O157 burden and direct healthcare costs in the United States: A simulation study

    • Journal of Food Protection
    • Over 20% of E. coli O157 illnesses and over 5% of Salmonella illnesses are estimated to be attributable to beef consumption in the United States. Irradiating ground beef is one possible method to reduce disease burden. We simulated the effect of ground beef irradiation on illnesses, hospitalizations, deaths, and direct healthcare costs from ground beef-associated E.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Salmonella
  12. Driving forces shaping the microbial ecology in meat packing plants

    • Frontiers in Microbiology
    • Meat production is a complex system, continually receiving animals, water, air, and workers, all of which serve as carriers of bacteria. Selective pressures involved in different meat processing stages such as antimicrobial interventions and low temperatures, may promote the accumulation of certain residential microbiota in meat cutting facilities. Bacteria including human pathogens from all these sources can contaminate meat surfaces.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  13. A new Rogue-like Escherichia phage UDF157lw to control Escherichia coli O157:H7

    • Frontiers in Microbiology
    • Introduction Shiga toxin-producing Escherichia coli (STEC) O157:H7 is one of the notorious foodborne pathogens causing high mortality through the consumption of contaminated food items. The food safety risk from STEC pathogens could escalate when a group of bacterial cells aggregates to form a biofilm. Bacterial biofilm can diminish the effects of various antimicrobial interventions and enhance the pathogenicity of the pathogens.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
  14. Evaluation of Peracetic Acid Treatment on Beef Trimmings and Subprimals against Salmonella and E. coli O157:H7 within Regulatory Retained Water Limitations

    • Journal of Food Protection
    • The application of antimicrobial treatments to beef trimmings prior to grinding for the reduction of microbial contamination in ground beef has increased recently. However, raw single-ingredient meat products are not permitted by Food Safety and Inspection Services (FSIS) to retain more than 0.49% water resulting from post-evisceration processing. The effectiveness of antimicrobials with the limited water retention is not well documented.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Salmonella
  15. Machine learning models for prediction of Escherichia coli O157:H7 growth in raw ground beef at different storage temperatures

    • Meat Science
    • Shiga toxin-producing Escherichia coli (STEC) can be life-threatening and lead to major outbreaks. The prevention of STEC-related infections can be provided by control measures at all stages of the food chain. The growth performance of E. coli O157:H7 at different temperatures in raw ground beef spiked with cocktail inoculum was investigated using machine learning (ML) models to address this problem.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  16. Minimum Concentrations of Slow Pyrolysis Paper and Walnut Hull Cyclone Biochars Needed to Inactivate Escherichia coli O157:H7 in Soil

    • Journal of Food Protection
    • Antimicrobial properties of biochar have been attributed to its ability to inactivate foodborne pathogens in soil, to varying degrees. High concentrations of biochar have reduced E. coli O157:H7 in soil and dairy manure compost, based on alkaline pH. Preliminary studies evaluating 31 different biochars determined that two slow pyrolysis biochars (paper biochar and walnut hull cyclone biochar) were the most effective at inactivating E. coli in soil.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  17. Prevalence and Antimicrobial Resistance of Escherichia coli O157:H7 and Salmonella, and the Prevalence of Staphylococcus aureus in Dairy Cattle and Camels under Pastoral Production System

    • Antibiotics
    • Escherichia coli O157:H7, Salmonella and Staphylococcus aureus are common foodborne pathogens. We determined the prevalence of E. coli O157:H7 and Salmonella in feces and milk and the prevalence of S. aureus in milk from dairy cattle and camels in the Borana pastoral community in the Southern Oromia Region of Ethiopia. Paired individual cow composite (pooled from all quarters in equal proportions) milk and fecal samples were collected from cows (n = 154) and camels (n = 158).

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
      • Salmonella
      • Staphylococcus aureus
  18. Lactic acid bacteria and spoilage bacteria: Their interactions in Escherichia coli O157:H7 biofilms on food contact surfaces and implications for beef contamination

    • Journal of Food Safety
    • Regardless of temperature, more viable O157:H7 cells were transferred from moist biofilms on TPU surfaces to beef. At 25°C, biofilm formed by Pseudomonas aeruginosa and Comamonas korensis exhibited the lowest O157:H7 transfer to beef. At 10°C, none of the multispecies biofilms affected the number of O157:H7 transfers to beef. Through enrichment, Escherichia coli O157:H7 was recovered from multispecies biofilms.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
  19. Foodborne pathogen inactivation in fruit juices utilizing commercial scale high-pressure processing: Effects of acidulants and pH

    • Food Science and Technology International
    • The effects of juice pH, type of acidulant, and post-treatment refrigeration on the high-pressure processing (HPP) inactivation of Escherichia coli O157:H7, Salmonella enterica, and Listeria monocytogenes in acid beverages were evaluated. Inoculated apple, orange, and grape juices (at their original pH and adjusted to pH 4.00, 4.50, and 5.00) were treated at 550 MPa for 1 min at 5 °C.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
      • Listeria monocytogenes
      • Salmonella
  20. Training in tools to develop quantitative microbial risk assessment of ready‐to‐eat food with a comparison between the Romanian and Spanish food supply chains

    • EFSA Journal
    • Abstract The prevention and control of bacterial contamination on ready‐to‐eat (RTE) fresh produce is an essential task to ensure food safety. Therefore, the development of novel and effective decontamination technologies to ensure microbiological safety of fruits and vegetables has gained considerable attention and new sanitisation methods are needed.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
      • Produce Safety
      • Leafy Greens
  21. Oral Phages Prophylaxis against Mixed Escherichia coli O157:H7 and Salmonella Typhimurium Infections in Weaned Piglets

    • Veterinary Microbiology
    • Escherichia coli and Salmonella Typhimurium are the main pathogens of diarrhea in weaned piglets. The prevention of bacterial diarrhea in weaned piglets by phage is rarely reported. We conducted this study to evaluate the preventive effect of phages on mixed Escherichia coli and Salmonella Typhimurium infections in weaned piglets.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Salmonella
  22. Modelling the Survival of Acid-Adapted and Nonadapted Escherichia coli O157:H7 in Burkina: A Western African Traditional Fermented Milk Product

    • International Journal of Food Science
    • Burkina, a traditional fermented dairy product, is consumed in most parts of West Africa, including Ghana. Studies on the microflora of Burkina have indicated the presence of Escherichia coli and other pathogenic organisms. Thus, predicting the survival of E. coli in the product will inform the best manufacturing and handling practices. This study investigated the combined effect of storage temperature and time on the survival of acid-adapted and acid-non-adapted E. coli O157:H7 in Burkina.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
  23. Phylogenetic relationship and virulence composition of Escherichia coli O26:H11 cattle and human strain collections in Scotland; 2002–2020

    • Frontiers in Microbiology
    • O26 is the commonest non-O157 Shiga toxin (stx)-producing Escherichia coli serogroup reported in human infections worldwide. Ruminants, particularly cattle, are the primary reservoir source for human infection. In this study, we compared the whole genomes and virulence profiles of O26:H11 strains (n = 99) isolated from Scottish cattle with strains from human infections (n = 96) held by the Scottish Escherichia coli O157/STEC Reference Laboratory, isolated between 2002 and 2020.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  24. Effect of electron beam irradiation on minas frescal cheese artificially contaminated with Shiga toxin-producing Escherichia coli O157:H7

    • International Dairy Journal
    • Minas frescal cheese (MFC) is a potential vehicle for Shiga toxin-producing Escherichia coli (STEC) O157:H7. The effect of electron beam irradiation on the control of STEC O157:H7 in artificially contaminated MFC (5 log cfu g-1) was evaluated. Samples were irradiated at doses of 1.0, 1.5, and 2.0 kGy and evaluated for 40 days at 4 °C. Shelf life extension and the stability of the lipid fraction of the cheeses were also evaluated.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
  25. 34 Assessing the Ability to Immunomodulate the Innate Immune System and Oxidative Status of Weaned Pigs Through a Prenatal Lipopolysaccharide Challenge

    • Journal of Animal Science
    • Gastrointestinal immunity and antioxidant defenses may be bolstered in young animals through prenatal immune system stimulation (PIS), but this is largely uninvestigated in swine. The objective of this experiment was to determine if a low dose of lipopolysaccharide (LPS) administered to late-gestating sows would alter the immune response and oxidative status of subsequent offspring.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli