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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 180

  1. Genetic diversity of Cryptosporidium spp., Encephalitozoon spp. and Enterocytozoon bieneusi in feral and captive pigeons in Central Europe

    • Parasitology Research
    • Cryptosporidium spp., Enterocytozoon bieneusi and Encephalitozoon spp. are the most common protistan parasites of vertebrates. The results show that pigeon populations in Central Europe are parasitised by different species of Cryptosporidium and genotypes of microsporidia of the genera Enterocytozoon and Encephalitozoon. A total of 634 and 306 faecal samples of captive and feral pigeons (Columba livia f.

      • Parasites
      • Cryptosporidium parvum
  2. Genomic and virulence analysis of in vitro cultured Cryptosporidium parvum

    • PLOS Pathogens
    • by Nigel Yarlett, Mary Morada, Deborah A. Schaefer, Kevin Ackman, Elizabeth Carranza, Rodrigo de Paula Baptista, Michael W. Riggs, Jessica Kissinger Recent advances in the in vitro cultivation of Cryptosporidium parvum using hollow fiber bioreactor technology (HFB) have permitted continuous growth of parasites that complete all life cycle stages.

      • Parasites
      • Cryptosporidium parvum
  3. Improving occupational health surveillance for enteric infections

    • Zoonoses and Public Health
    • Abstract Aims Enteric pathogens with a livestock reservoir pose a unique risk to people in occupations with regular contact with animals. However, public health surveillance of occupational exposures is inadequate, with surveillance for occupation typically focusing on the risk of transmission and the need for worker exclusion, rather than workplace exposures.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Shigella
      • Parasites
      • Cryptosporidium parvum
  4. Mixed Eimeria and Cryptosporidium infection and its effects on pathology and clinical outcomes in juvenile Asian seabass (Lates calcarifer) cultured in Thailand

    • Journal of Fish Diseases
    • Abstract Coccidiosis is an important disease in juvenile fish because of severe intestinal injury during infection. We first reported the mixed infection of intestinal coccidia and its association with health status and pathological findings in juvenile Asian seabass (Lates calcarifer) cultured in Thailand. Two groups of Asian seabass, 60‐day fish and 90‐day fish, were sampled to investigate prevalence and coccidian infection intensity using morphological characterization and PCR.

      • Parasites
      • Cryptosporidium parvum
  5. Study on genetic characteristics of Cryptosporidium isolates and first report of C. parvum IIdA24G2 subtype in dairy cattle in China

    • Parasitology Research
    • Cryptosporidium is an important gastrointestinal parasite that can cause mild to severe diarrhea in various vertebrates, including humans and domestic animals. Infection is prevalent in dairy cattle, particularly calves, resulting in diarrhea and increased mortality with significant production losses. However, the prevalence and identity of Cryptosporidium spp. in cattle in Heilongjiang Province is still poorly known.

      • Parasites
      • Cryptosporidium parvum
  6. Prevalence and molecular characterization of Cryptosporidium spp. in dairy and beef cattle in Shanxi, China

    • Parasitology Research
    • Cryptosporidium spp. are key gastrointestinal protists in humans and animals worldwide. Infected cattle are considered the main source of cryptosporidiosis outbreaks in humans. However, little is known about the genetic makeup of Cryptosporidium populations in Shanxi province, China. We analyzed 858 fecal samples collected from farms in Shanxi. The presence of Cryptosporidium spp.

      • Parasites
      • Cryptosporidium parvum
  7. First identification and coinfection detection of Enterocytozoon bieneusi, Encephalitozoon spp., Cryptosporidium spp. and Giardia duodenalis in diarrheic pigs in Southwest China

    • BMC Microbiology
    • Background Enterocytozoon bieneusi, Encephalitozoon spp., Cryptosporidium spp., and Giardia duodenalis (G. intestinalis) are enteric pathogens that cause diarrhea in pigs. This study aimed to determine the prevalence of these enteric parasites and their coinfection with E.

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  8. Case Report: The impact of severe cryptosporidiosis on the gut microbiota of a pediatric patient with CD40L immunodeficiency

    • Frontiers in Cellular and Infection Microbiology
    • Cryptosporidium parvum is a protozoan parasite and one of the leading causes of gastroenteritis in the world, primarily affecting very young children and immunocompromised patients. While infection is usually self-limiting, it can become chronic and even lethal in these vulnerable populations, in whom Cryptosporidium treatments are generally ineffective, due to their acting in concert with a functioning immune system.

      • Parasites
      • Cryptosporidium parvum
  9. Molecular evaluation of Cryptosporidium spp. in sheep in southern Xinjiang, China

    • Parasitology Research
    • Cryptosporidium spp. are diarrheagenic intestinal parasites with multiple hosts worldwide. A total of 1252 fresh fecal samples of sheep were collected from 10 large-scale farms in southern Xinjiang. Based on the small subunit ribosomal (SSU rRNA) gene of Cryptosporidium, 100 Cryptosporidium-positive samples (8.0%, 100/1252) were detected by PCR.

      • Parasites
      • Cryptosporidium parvum
  10. Prevalence of Blastocystis and Dientamoeba fragilis in diarrheal patients in Corum, Türkiye

    • Parasitology Research
    • To investigate the prevalence of Blastocystis and Dientamoeba fragilis in diarrhea patients and healthy individuals in Corum, Türkiye, fecal samples from 92 diarrhea patients and 50 healthy individuals were collected and evaluated using direct microscopy and molecular methods to screen for bacteria, protozoa, and viruses. The prevalence of Blastocystis was 24.6% in total and more frequent in the healthy group (30.0%).

      • Bacterial pathogens
      • Salmonella
      • Shigella
      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  11. Cryptosporidium parvum gp60 subtypes in diarrheic lambs and goat kids from Israel

    • Parasitology Research
    • Cryptosporidium parvum is the second-most prevalent Cryptosporidium species that infects humans worldwide. In European countries, it is the most prevalent species in sheep, suggesting that these animals are a source of zoonotic infection. Preweaned lambs and goats are particularly susceptible to infection by the parasite and may suffer from severe diarrhea whilst excreting large quantities of infectious oocysts.

      • Parasites
      • Cryptosporidium parvum
  12. Dominant infection of Cryptosporidium baileyi in broiler chickens in Zhejiang Province, China

    • Parasitology Research
    • Cryptosporidium is a common enteric parasite in chickens. A total of 812 fecal specimens were collected from 11 broiler farms in Zhejiang Province, China, and analyzed by nested PCR amplification based on the small subunit ribosomal RNA (SSU rRNA) gene. The overall infection rate of Cryptosporidium was 6.3% (51/812), and five of 11 farms were Cryptosporidium positive.

      • Parasites
      • Cryptosporidium parvum
  13. Mode of action studies confirm on-target engagement of lysyl-tRNA synthetase inhibitor and lead to new selection marker for Cryptosporidium

    • Frontiers in Cellular and Infection Microbiology
    • Introduction Cryptosporidiosis is a leading cause of diarrheal-associated morbidity and mortality, predominantly affecting children under 5 years old in low-and-middle-income countries. There is no effective treatment and no vaccine. New therapeutics are emerging from drug discovery efforts. It is critical that mode of action studies are performed alongside drug discovery to ensure the best clinical outcomes.

      • Parasites
      • Cryptosporidium parvum
  14. Insights into Toxic Prymnesium parvum Blooms as a Cause of the Ecological Disaster on the Odra River

    • Toxins
    • In 2022, Poland and Germany experienced a prolonged and extensive mass fish kill in the Odra River. During the period from the end of July to the beginning of September 2022, a high level of incidental disease and mortality was observed in various fish species (dozens of different species were found dead).

      • Parasites
      • Cryptosporidium parvum
  15. Prioritization of vegetable-borne biological hazards in Argentina using a multicriteria decision analysis tool

    • Food Science and Technology International
    • Vegetables, especially those eaten raw, have been implicated in several foodborne disease outbreaks. Since multiple vegetable matrices and hazards are involved, risk managers have to prioritize those with the greatest impact on public health to design control strategies. In this study, a scientific-based risk ranking of foodborne pathogens transmitted by leafy green vegetables in Argentina was performed.

      • Bacterial pathogens
      • Campylobacter
      • Escherichia coli O157:H7
      • Salmonella
      • Shigella
      • Yersinia
      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
      • Toxoplasma gondii
      • Viruses
      • Hepatitis
      • Norovirus
  16. Scalable cryopreservation of infectious Cryptosporidium hominis oocysts by vitrification

    • PLOS Pathogens
    • by Justyna J. Jaskiewicz, Denise Ann E. Dayao, Donald Girouard, Derin Sevenler, Giovanni Widmer, Mehmet Toner, Saul Tzipori, Rebecca D. Sandlin Cryptosporidium hominis is a serious cause of childhood diarrhea in developing countries. The development of therapeutics is impeded by major technical roadblocks including lack of cryopreservation and simple culturing methods.

      • Parasites
      • Cryptosporidium parvum
  17. Novel viruses of the family Partitiviridae discovered in Saccharomyces cerevisiae

    • PLOS Pathogens
    • by Nathan T. Taggart, Angela M. Crabtree, Jack W. Creagh, Rodolfo Bizarria Jr., Shunji Li, Ignacio de la Higuera, Jonathan E. Barnes, Mason A. Shipley, Josephine M. Boyer, Kenneth M. Stedman, F. Marty Ytreberg, Paul A. Rowley It has been 49 years since the last discovery of a new virus family in the model yeast Saccharomyces cerevisiae. A large-scale screen to determine the diversity of double-stranded RNA (dsRNA) viruses in S.

      • Parasites
      • Cryptosporidium parvum
  18. Description of Limnobaculum eriocheiris sp. nov., an intestinal bacterium of Eriocheir sinensis, and reclassification of the genera Jinshanibacter and Insectihabitans as Limnobaculum

    • Antonie van Leeuwenhoek
    • A Gram-stain-negative, aerobic, non-motile and rod-shaped strain, designated LJY008T, was isolated from the intestinal of Eriocheir sinensis in Pukou base of Jiangsu Institute of Freshwater Fisheries. Strain LJY008T could grow at 4–37 ℃ (optimum, 30 ℃), pH 6.0–8.0 (optimum, pH 7.0), and with 1.0–6.0% NaCl (w/v; optimum, 1.0%).

      • Parasites
      • Cryptosporidium parvum
  19. Identification and characterization of opportunistic pathogen Pectobacterium polonicum causing potato blackleg in China

    • Frontiers in Plant Science
    • Blackleg and aerial stem rot of potato (Solanum tuberosum L.), caused by soft rot enterobacteria of the genera Pectobacterium and Dickeya, has recently increased years in Hebei Province, China. Field surveys were performed during the 2021 potato growing season in Hebei to identify and characterize bacterial pathogens.

      • Parasites
      • Cryptosporidium parvum
  20. Intestine microbiota and SCFAs response in naturally Cryptosporidium-infected plateau yaks

    • Frontiers in Cellular and Infection Microbiology
    • Diarrhea is a severe bovine disease, globally prevalent in farm animals with a decrease in milk production and a low fertility rate. Cryptosporidium spp. are important zoonotic agents of bovine diarrhea. However, little is known about microbiota and short-chain fatty acids (SCFAs) changes in yaks infected with Cryptosporidium spp. Therefore, we performed 16S rRNA sequencing and detected the concentrations of SCFAs in Cryptosporidium-infected yaks.

      • Parasites
      • Cryptosporidium parvum
  21. Leaf blight of rice-paper plant, Tetrapanax papyrifer, caused by Neofusicoccum parvum: a potential source of stem rot diseases of mango and grape

    • Journal of General Plant Pathology
    • Rice-paper plant, Tetrapanax papyrifer is a woody plant native to Taiwan and widely distributed in western Japan. Due to its low commercial value, little is known about its interactions with microorganisms. Here, we isolated Neofusicoccum parvum, a known causal agent of grape stem rot and mango stem-end rot, from leaf blight on T. papyrifer. Compared to mango isolate, N.

      • Parasites
      • Cryptosporidium parvum
  22. Persistence and survival of Cryptosporidium parvum oocysts on lamb's lettuce leaves during plant growth conditions and industrial washing conditions in minimally-processed salads

    • International Journal of Food Microbiology
    • Cryptosporidium is the causative agent of cryptosporidiosis, which results, among others, in profuse diarrhoea. Transmission to humans occurs via the faecal-oral route directly by contact with infected hosts or indirectly by waterborne or foodborne routes. For the latter, parasite transmission is closely linked to the oocyst's ability to persist and survive in food matrices.

      • Parasites
      • Cryptosporidium parvum
  23. Health risks of Cryptosporidium and Giardia in the application of surface water and septic tank effluent in Chinese agriculture: Impact on cancer patients identified by quantitative microbial risk assessment

    • Food Microbiology
    • The protozoa Cryptosporidium and Giardia are major causes of diarrhea and are commonly found on vegetables in China. They pose a health risk, particularly to immunocompromised individuals, including cancer patients.

      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
  24. Disease caused by Neofusicoccum parvum in pruning wounds of grapevine shoots and its control by Trichoderma spp. and Xenorhabdus szentirmaii

    • Fungal Biology
    • Neofusicoccum parvum, is a fungal pathogen and one of the etiological agents of dieback disease in grapevines. The fungus causes deterioration of vines due to vascular colonization and/or production of toxins. We report herein the inhibitory effects of Trichoderma spp. isolates and the antifungal effects of cell-free supernatants (CFS) from Xenorhabdus and Photorhabdus bacteria against N.

      • Parasites
      • Cryptosporidium parvum
  25. Distribution of Cryptosporidium parvum subgenotypes in pre-weaned calves in Germany

    • Veterinary Parasitology: Regional Studies and Reports
    • Cryptosporidium parvum is a main cause of severe diarrhea in young calves leading to economic loss and animal suffering. Little is known about the epidemiology of the genetic subtypes that may differ in their infectiousness and zoonotic potential. The present study analyzes the distribution of Glycoprotein 60 (GP60) variants in C.

      • Parasites
      • Cryptosporidium parvum