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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 57

  1. A chromosome-level genome assembly of Solanum chilense, a tomato wild relative associated with resistance to salinity and drought

    • Frontiers in Plant Science
    • Introduction

      Solanum chilense is a wild relative of tomato reported to exhibit resistance to biotic and abiotic stresses. There is potential to improve tomato cultivars via breeding with wild relatives, a process greatly accelerated by suitable genomic and genetic resources.

      Methods

      • Produce Safety
      • Ethylene Sensitive
  2. CRISPR-enabled investigation of fitness costs associated with the E198A mutation in β-tubulin of Colletotrichum siamense

    • Frontiers in Plant Science
    • Introduction

      Understanding fitness costs associated with fungicide resistance is critical to improve resistance management strategies. E198A in b-tubulin confers resistance to the fungicide thiophanate-methyl and has been widely reported in several plant pathogens including Colletotrichum siamense.

      Method

      • Produce Safety
      • Ethylene Sensitive
  3. Biomarkers of postharvest resilience: unveiling the role of abscisic acid in table grapes during cold storage

    • Frontiers in Plant Science
    • Table grapes are considered non-climacteric fruit, not showing a rapid increase in respiration rate and ethylene production during ripening. Previous research has suggested that abscisic acid (ABA) may have a more crucial role in grape postharvest behaviour. This study aimed to identify biomarkers of postharvest resilience and flavour life of imported table grapes.

      • Produce Safety
      • Post Harvest
  4. Iron-modified biochar improves plant physiology, soil nutritional status and mitigates Pb and Cd-hazard in wheat (Triticum aestivum L.)

    • Frontiers in Plant Science
    • Environmental quality and food safety is threatened by contamination of lead (Pb) and cadmium (Cd) heavy metals in agricultural soils. Therefore, it is necessary to develop effective techniques for remediation of such soils. In this study, we prepared iron-modified biochar (Fe-BC) which combines the unique characteristics of pristine biochar (BC) and iron.

      • Chemical contaminants
      • Heavy Metals
      • Produce Safety
      • Post Harvest
  5. Improved chilling tolerance in glasshouse-grown potted sweet basil by end-of-production, short-duration supplementary far red light

    • Frontiers in Plant Science
    • Sweet basil is a popular culinary herb used in many cuisines around the world and is widely grown commercially for retail as a live potted plant. However, basil is easily damaged by temperatures below 12 °C meaning plants must be transported from the grower to the retailer in a warm transport chain, adding considerable commercial cost in temperate countries.

      • Produce Safety
      • Fresh Cut
  6. Targeted system approach to ethylene biosynthesis and signaling of a heat tolerant tomato cultivar; the impact of growing season on fruit ripening

    • Frontiers in Plant Science
    • Growing tomato in hot weather conditions is challenging for fruit production and yield. Tomato cv. Savior is a heat-tolerant cultivar which can be grown during both the Vietnamese winter (mild condition) and summer (hot condition) season. Understanding the mechanisms of ethylene biosynthesis and signaling are important for agriculture, as manipulation of these pathways can lead to improvements in crop yield, stress tolerance, and fruit ripening.

      • Produce Safety
      • Post Harvest
  7. ASFL-YOLOX: an adaptive spatial feature fusion and lightweight detection method for insect pests of the Papilionidae family

    • Frontiers in Plant Science
    • Introduction Insect pests from the family Papilionidae (IPPs) are a seasonal threat to citrus orchards, causing damage to young leaves, affecting canopy formation and fruiting. Existing pest detection models used by orchard plant protection equipment lack a balance between inference speed and accuracy. Methods To address this issue, we propose an adaptive spatial feature fusion and lightweight detection model for IPPs, called ASFL-YOLOX.

      • Produce Safety
      • Seasonal Produce
  8. Tobamovirus infection aggravates gray mold disease caused by Botrytis cinerea by manipulating the salicylic acid pathway in tomato

    • Frontiers in Plant Science
    • Botrytis cinerea is the causative agent of gray mold disease, and infects more than 1400 plant species, including important crop plants. In tomato, B. cinerea causes severe damage in greenhouses and post-harvest storage and transport. Plant viruses of the Tobamovirus genus cause significant damage to various crop species. In recent years, the tobamovirus tomato brown rugose fruit virus (ToBRFV) has significantly affected the global tomato industry.

      • Produce Safety
      • Post Harvest
  9. The MADS-box gene EjAGL15 positively regulates lignin deposition in the flesh of loquat fruit during its storage

    • Frontiers in Plant Science
    • Introduction Lignification of fruit flesh is a common physiological disorder that occurs during post-harvest storage, resulting in the deterioration of fruit quality. Lignin deposition in loquat fruit flesh occurs due to chilling injury or senescence, at temperatures around 0°C or 20°C, respectively.

      • Produce Safety
      • Post Harvest
  10. Photosynthetic activity and metabolic profiling of bread wheat cultivars contrasting in drought tolerance

    • Frontiers in Plant Science
    • The rapid increase in population growth under changing climatic conditions causes drought stress, threatening world food security. The identification of physiological and biochemical traits acting as yield-limiting factors in diverse germplasm is pre-requisite for genetic improvement under water-deficit conditions. The major aim of the present study was the identification of drought-tolerant wheat cultivars with a novel source of drought tolerance from local wheat germplasm.

      • Produce Safety
      • Ethylene Sensitive
  11. An overview of ethylene insensitive tomato mutants: Advantages and disadvantages for postharvest fruit shelf-life and future perspective

    • Frontiers in Plant Science
    • The presence of ethylene during postharvest handling of tomatoes can be the main problem in maintaining fruit shelf-life by accelerating the ripening process and causing several quality changes in fruit. Several researchers have studied the methods for improving the postharvest life of tomato fruit by controlling ethylene response, such as by mutation. New ethylene receptor mutants have been identified, namely Sletr1-1, Sletr1-2, Nr (Never ripe), Sletr4-1, and Sletr5-1.

      • Produce Safety
      • Ethylene Sensitive
  12. A comprehensive review on acquisition of phenotypic information of Prunoideae fruits: Image technology

    • Frontiers in Plant Science
    • Fruit phenotypic information reflects all the physical, physiological, biochemical characteristics and traits of fruit. Accurate access to phenotypic information is very necessary and meaningful for post-harvest storage, sales and deep processing. The methods of obtaining phenotypic information include traditional manual measurement and damage detection, which are inefficient and destructive.

      • Produce Safety
      • Post Harvest
  13. Comparative transcriptomic profiling of peach and nectarine cultivars reveals cultivar-specific responses to chilled postharvest storage

    • Frontiers in Plant Science
    • Introduction

      Peach (Prunus persica (L.) Batsch,) and nectarine fruits (Prunus persica (L.) Batsch, var nectarine), are characterized by a rapid deterioration at room temperature. Therefore, cold storage is widely used to delay fruit post-harvest ripening and extend fruit commercial life. Physiological disorders, collectively known as chilling injury, can develop typically after 3 weeks of low-temperature storage and affect fruit quality.

      Methods

      • Produce Safety
      • Post Harvest
  14. Functional characterization of a terpene synthase responsible for (E)-β-ocimene biosynthesis identified in Pyrus betuleafolia transcriptome after herbivory

    • Frontiers in Plant Science
    • (E)-β-ocimene, a ubiquitous monoterpene volatile in plants, is emitted from flowers to attract pollinators and/or from vegetative tissues as part of inducible defenses mediated by complex signaling networks when plants are attacked by insect herbivores. Wild pear species Pyrus betuleafolia used worldwide as rootstock generally displays valuable pest-resistant traits and is a promising genetic resource for pear breeding.

      • Produce Safety
      • Ethylene Sensitive
  15. Ethylene: Management and breeding for postharvest quality in vegetable crops. A review

    • Frontiers in Plant Science
    • Ethylene is a two-carbon gaseous plant growth regulator that involved in several important physiological events, including growth, development, ripening and senescence of fruits, vegetables, and ornamental crops. The hormone accelerates ripening of ethylene sensitive fruits, leafy greens and vegetables at micromolar concentrations, and its accumulation can led to fruit decay and waste during the postharvest stage.

      • Produce Safety
      • Fresh Cut
      • Ethylene Sensitive
  16. Molecular insights into mechanisms underlying thermo-tolerance in tomato

    • Frontiers in Plant Science
    • Plant productivity is being seriously compromised by climate-change-induced temperature extremities. Agriculture and food safety are threatened due to global warming, and in many cases the negative impacts have already begun. Heat stress leads to significant losses in yield due to changes in growth pattern, plant phonologies, sensitivity to pests, flowering, grain filling, maturity period shrinkage, and senescence. Tomato is the second most important vegetable crop.

      • Produce Safety
      • Pre Harvest
  17. Seasonal variation in the response of a monoecious crop to increased temperature and fertilizers

    • Frontiers in Plant Science
    • Climate warming may affect the performance of plants directly through altering vegetative or reproductive traits, and indirectly through modifying interactions with their pollinators. On the other hand, the addition of fertilizers to the soil may increase the quantity and quality of floral rewards, favoring the visitation of pollinators and, consequently, the reproductive success of plants.

      • Produce Safety
      • Seasonal Produce
  18. Proteomic and metabolomic studies on chilling injury in peach and nectarine

    • Frontiers in Plant Science
    • Peaches and nectarines are temperate climate stone fruits, which should be stored at 0°C to prevent the ripening of these climacteric fruits. However, if stored for too long or if stored at a higher temperature (4 or 5°C), they develop chilling injury. Chilling injury damage includes (1) dry, mealy, wooly (lack of juice) fruits, (2) hard-textured fruits with no juice (leatheriness), (3) flesh browning, and (4) flesh bleeding or internal reddening.

      • Produce Safety
      • Ethylene Sensitive
  19. Delaying ripening using 1-MCP reveals chilling injury symptom development at the putative chilling threshold temperature for mature green banana

    • Frontiers in Plant Science
    • Storage at the putative chilling threshold temperature (CTT) to avoid chilling injury still limits postharvest handling of tropical fruit like banana in that ripening may occur at the CTT. To determine whether chilling injury (CI) symptoms would develop in mature green (MG) banana fruit if the CTT exposure was extended by inhibiting ethylene action and thus ripening, 1-methylcyclopropene (1-MCP) was applied.

      • Produce Safety
      • Ethylene Sensitive
  20. Plant hormones and neurotransmitter interactions mediate antioxidant defenses under induced oxidative stress in plants

    • Frontiers in Plant Science
    • Due to global climate change, abiotic stresses are affecting plant growth, productivity, and the quality of cultivated crops. Stressful conditions disrupt physiological activities and suppress defensive mechanisms, resulting in stress-sensitive plants.

      • Produce Safety
      • Ethylene Sensitive
  21. Economies of scale in constructing plant factories with artificial lighting and the economic viability of crop production

    • Frontiers in Plant Science
    • Since the introduction of LED lamps a decade ago, the plant factory with artificial lighting (PFAL) has been expected to be a savior that overcomes the food crisis, brings food safety, and enhances environmental friendliness. Despite such high expectations, the diffusion of commercial crop production in PFALs has been slow. It has been said that the main reason for this is the huge initial investment required to construct PFALs.

      • Produce Safety
      • Pre Harvest
  22. Identification and expression analysis of the lipid phosphate phosphatases gene family reveal their involvement in abiotic stress response in kiwifruit

    • Frontiers in Plant Science
    • Lipid phosphate phosphatases (LPPs) are a key enzyme in the production and degradation of phosphatidic acid (PA), which plays an important role in plant growth, development, stress resistance and plant hormone response. Thus far, little is known about the LPP family genes in kiwifruit (Actinidia spp.). According to this study, 7 members in the AcLPP family were identified from the whole genome of kiwifruit, the subcellular localization predictions were mainly on the plasma membrane.

      • Produce Safety
      • Post Harvest
  23. PpMYB52 negatively regulates peach bud break through the gibberellin pathway and through interactions with PpMIEL1

    • Frontiers in Plant Science
    • Bud dormancy, which enables damage from cold temperatures to be avoided during winter and early spring, is an important adaptive mechanism of deciduous fruit trees to cope with seasonal environmental changes and temperate climates. Understanding the regulatory mechanism of bud break in fruit trees is highly important for the artificial control of bud break and the prevention of spring frost damage.

      • Produce Safety
      • Seasonal Produce
  24. Postharvest dormancy-related changes of endogenous hormones in relation to different dormancy-breaking methods of potato (Solanum tuberosum L.) tubers

    • Frontiers in Plant Science
    • Development of an efficient and eco-friendly technique to break tuber dormancy in potato (Solanum tuberosum L.) is highly demanded due to the production of two or more crops annually. Several physiological and hormonal changes have been found to be related to the breaking of tuber dormancy; however, their consistency with genotypes and different protocols have not been well clarified.

      • Produce Safety
      • Post Harvest
  25. Evolutionary Dynamics of the Repeatome Explains Contrasting Differences in Genome Sizes and Hybrid and Polyploid Origins of Grass Loliinae Lineages

    • Frontiers in Plant Science
    • The repeatome is composed of diverse families of repetitive DNA that keep signatures on the historical events that shaped the evolution of their hosting species. The cold seasonal Loliinae subtribe includes worldwide distributed taxa, some of which are the most important forage and lawn species (fescues and ray-grasses). The Loliinae are prone to hybridization and polyploidization.

      • Produce Safety
      • Seasonal Produce