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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 77

  1. A chromosome-level genome assembly of Solanum chilense, a tomato wild relative associated with resistance to salinity and drought

    • Frontiers in Plant Science
    • Introduction

      Solanum chilense is a wild relative of tomato reported to exhibit resistance to biotic and abiotic stresses. There is potential to improve tomato cultivars via breeding with wild relatives, a process greatly accelerated by suitable genomic and genetic resources.

      Methods

      • Produce Safety
      • Ethylene Sensitive
  2. OsJMJ718, a histone demethylase gene, positively regulates seed germination in rice

    • The Plant Journal
    • SUMMARY Seed vigor has major impact on the rate and uniformity of seedling growth, crop yield, and quality. However, the epigenetic regulatory mechanism of crop seed vigor remains unclear. In this study, a (jumonji C) JmjC gene of the histone lysine demethylase OsJMJ718 was cloned in rice, and its roles in seed germination and its epigenetic regulation mechanism were investigated. OsJMJ718 was located in the nucleus and was engaged in H3K9 methylation.

      • Produce Safety
      • Ethylene Sensitive
  3. Application of UV-B Light and Low-Toxicity Compounds to Prevent Postharvest Spoilage on Lemons

    • Food and Bioprocess Technology
    • Green and blue molds and sour rot, caused by Penicillium digitatum, P. italicum, and Geotrichum citri-aurantii, are postharvest diseases which represent an important economic issue in lemon production. Conventionally, their control involves the intensive use of synthetic fungicides, leading to the emergence of resistant strains and harmful residue accumulation on fruits.

      • Chemical contaminants
      • Pesticide residues
      • Produce Safety
      • Ethylene Sensitive
  4. Ethylene production during Alternaria infections on potato plants and its antagonistic role in virulence of different Alternaria species

    • Plant Pathology
    • Large‐spored Alternaria species lose pathogenicity after treatment with the ethylene biosynthesis inhibitor 2‐aminoethoxyvinyl glycine (AVG), while for small‐spored species pathogenicity increased. Abstract Alternaria species are notorious pathogens of solanaceous crops and are known to produce a plethora of toxins. Nevertheless, the involvement of toxins or other virulence factors in Alternaria infections on potato plants has never been investigated.

      • Produce Safety
      • Ethylene Sensitive
  5. A Comparative Study of Ethylene Detection Methods in Fruit Supply Chains: a Review

    • Food Analytical Methods
    • Ethylene is a primary plant hormone associated with the ripening process of fruits. Ethylene can initiate the ripening process in fruits even at sub-parts per million concentrations. Therefore, ethylene monitoring during fruit transport and storage is very important in order to ensure optimum quality control and shelf-life extension.

      • Produce Safety
      • Ethylene Sensitive
  6. CRISPR-enabled investigation of fitness costs associated with the E198A mutation in β-tubulin of Colletotrichum siamense

    • Frontiers in Plant Science
    • Introduction

      Understanding fitness costs associated with fungicide resistance is critical to improve resistance management strategies. E198A in b-tubulin confers resistance to the fungicide thiophanate-methyl and has been widely reported in several plant pathogens including Colletotrichum siamense.

      Method

      • Produce Safety
      • Ethylene Sensitive
  7. CRISPR/Cas9‐mediated mutation of Eil1 transcription factor genes affects exogenous ethylene tolerance and early flower senescence in Campanula portenschlagiana

    • Plant Biotechnology Journal
    • Summary Improving tolerance to ethylene‐induced early senescence of flowers and fruits is of major economic importance for the ornamental and food industry. Genetic modifications of genes in the ethylene‐signalling pathway have frequently resulted in increased tolerance but often with unwanted side effects. Here, we used CRISPR/Cas9 to knockout the function of two CpEil1 genes expressed in flowers of the diploid ornamental plant Campanula portenschlagiana.

      • Produce Safety
      • Ethylene Sensitive
  8. Metalloporphyrin-based Amphiphilic Porous Organic Polymer with Peroxidase-mimetic Activity for Colorimetric Detection of Ascorbic Acid

    • Food Analytical Methods
    • Porous organic polymers (POPs) are a class of materials that combine the properties of both polymers and porosity. They are characterized by their network structure composed of repeating organic units, which form pores or cavities throughout the material. Owing to their unique features including tunable porosity, abundant accessible active sites and synthetically control ability, POPs have been widely employed in the fields of catalysis, adsorption, and biomedicine.

      • Produce Safety
      • Ethylene Sensitive
  9. ETHYLENE-INSENSITIVE 3-LIKE 2 regulates β-carotene and ascorbic acid accumulation in tomatoes during ripening

    • Plant Physiology
    • ETHYLENE-INSENSITIVE 3/ETHYLENE-INSENSITIVE 3-LIKEs (EIN3/EILs) are important ethylene response factors during fruit ripening. Here, we discovered that EIL2 controls carotenoid metabolism and ascorbic acid (AsA) biosynthesis in tomato (Solanum lycopersicum). In contrast to the red fruits presented in the wild type (WT) 45 d after pollination, the fruits of CRISPR/Cas9 eil2 mutants and SlEIL2 RNA interference lines (ERIs) showed yellow or orange fruits.

      • Produce Safety
      • Ethylene Sensitive
  10. Isolation of three MiDi19-4 genes from mango, the ectopic expression of which confers early flowering and enhances stress tolerance in transgenic Arabidopsis

    • Planta
    • Drought-induced protein 19 (Di19) is a drought-induced protein that is mainly involved in multiple stress responses. Here, three Di19-4 genes (MiDi19-4A/B/C) in mango (Mangifera indica L.) were identified, and the coding sequences (CDS) had lengths of 684, 666, and 672 bp and encoded proteins with 228, 222, and 224 amino acids, respectively.

      • Produce Safety
      • Ethylene Sensitive
  11. Transcription factors GmERF1 and GmWRKY6 synergistically regulate low phosphorus tolerance in soybean

    • Plant Physiology
    • Soybean (Glycine max) is a major grain and oil crop worldwide, but low phosphorus (LP) in soil severely limits the development of soybean production. Dissecting the regulatory mechanism of the phosphorus (P) response is crucial for improving the P use efficiency of soybean. Here, we identified a transcription factor, GmERF1 (ethylene response factor 1), that is mainly expressed in soybean root and localized in the nucleus.

      • Produce Safety
      • Ethylene Sensitive
  12. Chemical profile and sensory perception of coffee produced in agroforestry management

    • European Food Research and Technology
    • Ecological sustainability, productivity, and sensory quality of coffee fruits are important variables for coffee cultivation in agroforestry systems (AFSs). There is an appreciation of the ecological interactions between agricultural crops and native plants in the AFS. Coffea arabica L. is a shrub with geographic origins in the tropical forests of Africa. Thus, the production of coffee in AFSs can be an interesting alternative.

      • Produce Safety
      • Ethylene Sensitive
  13. Photosynthetic activity and metabolic profiling of bread wheat cultivars contrasting in drought tolerance

    • Frontiers in Plant Science
    • The rapid increase in population growth under changing climatic conditions causes drought stress, threatening world food security. The identification of physiological and biochemical traits acting as yield-limiting factors in diverse germplasm is pre-requisite for genetic improvement under water-deficit conditions. The major aim of the present study was the identification of drought-tolerant wheat cultivars with a novel source of drought tolerance from local wheat germplasm.

      • Produce Safety
      • Ethylene Sensitive
  14. An overview of ethylene insensitive tomato mutants: Advantages and disadvantages for postharvest fruit shelf-life and future perspective

    • Frontiers in Plant Science
    • The presence of ethylene during postharvest handling of tomatoes can be the main problem in maintaining fruit shelf-life by accelerating the ripening process and causing several quality changes in fruit. Several researchers have studied the methods for improving the postharvest life of tomato fruit by controlling ethylene response, such as by mutation. New ethylene receptor mutants have been identified, namely Sletr1-1, Sletr1-2, Nr (Never ripe), Sletr4-1, and Sletr5-1.

      • Produce Safety
      • Ethylene Sensitive
  15. A Sensitive and Selective Electrochemical Aptasensor Based On Gold Nanoflower/Polyethyleneimine (Pei)-Functionalized Metal Organic Framework Nanocomposites for Label-Free Determination of Streptomycin in Milk Samples

    • Food Analytical Methods
    • Rapid, accurate, sensitive, and real-time detection of streptomycin (STR) residues in dairy products is very important. In this work, for the first time, the gold nanoflower/polyethyleneimine-functionalized metal organic framework (AuNF-PEI-MIL-101(Cr)) nanocomposites were synthesized via hydrothermal method and characterized using various techniques (SEM, TEM, XRD, FT-IR, and XPS).

      • Produce Safety
      • Ethylene Sensitive
  16. Functional characterization of a terpene synthase responsible for (E)-β-ocimene biosynthesis identified in Pyrus betuleafolia transcriptome after herbivory

    • Frontiers in Plant Science
    • (E)-β-ocimene, a ubiquitous monoterpene volatile in plants, is emitted from flowers to attract pollinators and/or from vegetative tissues as part of inducible defenses mediated by complex signaling networks when plants are attacked by insect herbivores. Wild pear species Pyrus betuleafolia used worldwide as rootstock generally displays valuable pest-resistant traits and is a promising genetic resource for pear breeding.

      • Produce Safety
      • Ethylene Sensitive
  17. Ethylene: Management and breeding for postharvest quality in vegetable crops. A review

    • Frontiers in Plant Science
    • Ethylene is a two-carbon gaseous plant growth regulator that involved in several important physiological events, including growth, development, ripening and senescence of fruits, vegetables, and ornamental crops. The hormone accelerates ripening of ethylene sensitive fruits, leafy greens and vegetables at micromolar concentrations, and its accumulation can led to fruit decay and waste during the postharvest stage.

      • Produce Safety
      • Fresh Cut
      • Ethylene Sensitive
  18. Development and validation of a sensitive LC-MS/MS method for determination of intracellular concentration of fluconazole in Candida albicans

    • Frontiers in Microbiology
    • Systemic candidiasis is the fourth leading cause of healthcare-associated infections worldwide. The combination therapy based on existing antifungal agents is well-established to overcome drug resistance and restore antifungal efficacy against drug-resistant strains.

      • Produce Safety
      • Ethylene Sensitive
  19. Proteomic and metabolomic studies on chilling injury in peach and nectarine

    • Frontiers in Plant Science
    • Peaches and nectarines are temperate climate stone fruits, which should be stored at 0°C to prevent the ripening of these climacteric fruits. However, if stored for too long or if stored at a higher temperature (4 or 5°C), they develop chilling injury. Chilling injury damage includes (1) dry, mealy, wooly (lack of juice) fruits, (2) hard-textured fruits with no juice (leatheriness), (3) flesh browning, and (4) flesh bleeding or internal reddening.

      • Produce Safety
      • Ethylene Sensitive
  20. Ionomic and metabolic responses of wheat seedlings to PEG-6000-simulated drought stress under two phosphorus levels

    • PLOS ONE
    • by Li Chunyan, Zhang Xiangchi, Li Chao, Li Cheng Background Wheat (Triticum aestivum L.) is a major food crop worldwide.

      • Produce Safety
      • Ethylene Sensitive
  21. Delaying ripening using 1-MCP reveals chilling injury symptom development at the putative chilling threshold temperature for mature green banana

    • Frontiers in Plant Science
    • Storage at the putative chilling threshold temperature (CTT) to avoid chilling injury still limits postharvest handling of tropical fruit like banana in that ripening may occur at the CTT. To determine whether chilling injury (CI) symptoms would develop in mature green (MG) banana fruit if the CTT exposure was extended by inhibiting ethylene action and thus ripening, 1-methylcyclopropene (1-MCP) was applied.

      • Produce Safety
      • Ethylene Sensitive
  22. Plant hormones and neurotransmitter interactions mediate antioxidant defenses under induced oxidative stress in plants

    • Frontiers in Plant Science
    • Due to global climate change, abiotic stresses are affecting plant growth, productivity, and the quality of cultivated crops. Stressful conditions disrupt physiological activities and suppress defensive mechanisms, resulting in stress-sensitive plants.

      • Produce Safety
      • Ethylene Sensitive
  23. A directed genome evolution method to enhance hydrogen production in Rhodobacter capsulatus

    • Frontiers in Microbiology
    • Nitrogenase-dependent H2 production by photosynthetic bacteria, such as Rhodobacter capsulatus, has been extensively investigated. An important limitation to increase H2 production using genetic manipulation is the scarcity of high-throughput screening methods to detect possible overproducing mutants. Previously, we engineered R. capsulatus strains that emitted fluorescence in response to H2 and used them to identify mutations in the nitrogenase Fe protein leading to H2 overproduction.

      • Produce Safety
      • Ethylene Sensitive
  24. Determination of Singlet Oxygen Generated in Vegetable Oil Using Furfuryl Alcohol as Trapping Agent

    • Food Analytical Methods
    • Singlet oxygen (1O2), an initiator for photooxidation, is responsible for vegetable oil degradation. However, few details about the formation of 1O2 in vegetable oil are known due to the lack of a reliable method for its determination. In this study, a simple, reliable, and sensitive high-performance liquid chromatography (HPLC) method for indirect quantification of 1O2 generated in vegetable oil was developed. Furfuryl alcohol (FFA) was selected as a real-time “trap” for 1O2.

      • Produce Safety
      • Ethylene Sensitive
  25. MicroRNA candidate miRcand137 in apple is induced by Botryosphaeria dothidea for impairing host defense

    • Plant Physiology
    • MicroRNA (miRNA)-mediated gene silencing is a master gene regulatory pathway in plant–pathogen interactions. The differential accumulation of miRNAs among plant varieties alters the expression of target genes, affecting plant defense responses and causing resistance differences among varieties. Botryosphaeria dothidea is an important phytopathogenic fungus of apple (Malus domestica).

      • Produce Safety
      • Ethylene Sensitive