The goal of this project is to characterize evolutionary changes in the genomes of fungal plant pathogens in the genus Calonectria to identify gene families or individual genes that play a role in host plant infection by the target pathogen species C. henricotiae and C. pseudonaviculata. Specific project objectives are: 1) characterize evolutionary relationships among target fungal plant pathogens in the genus Calonectria and closely related fungi in the family Nectriaceae through generation of a time-calibrated phylogeny using previously identified single-copy protein sequence data, 2) identify rapidly evolving gene families by measuring gene family expansion and contraction across the time-calibrated phylogeny, 3) identify gene families or genes that play a role in host plant infection through functional annotation of protein sequence data from rapidly evolving gene families in target pathogens.
ARIS LOG: 0068708. TITLE: LEVERAGING POPULATION GENOMICS TO UNDERSTAND THE MIGRATION AND EVOLUTION OF THE CAUSAL PATHOGENS OF BOXWOOD BLIGHT
Objective
Investigators
Agricultural Research Service
Institution
USDA - Agricultural Research Service
Start date
2021
End date
2023
Funding Source
Project number
CALW-2021-06284
Accession number
1026758
Categories