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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1251 - 1275 of 1284

  1. Pathogen re-colonization of in-house composted and noncomposted broiler litter

    • Journal of Applied Poultry Research
    • In-house litter composting has been reintroduced to the industry and shown to reduce bacteria by as much as 2 orders of magnitude. Other industries have demonstrated that pathogens can recolonize a waste-residual when microbial competition has been reduced or inhibited following composting. Poultry growers, in the process of shifting to in-house composting for pathogen control, should be aware of this potential problem.

      • Campylobacter
      • Bacterial pathogens
  2. On farm prevention of Campylobacter and Salmonella: lessons learned from basic biosecurity interventions

    • Journal of Applied Poultry Research
    • An observational study examining prevalence of Campylobacter and Salmonella in environmental samples and biosecurity interventions to mitigate these 2 pathogens was performed for 3 consecutive flocks on a commercial broiler farm in northeast Georgia. Monitoring was performed first on a baseline flock for which no interventions or treatments were undertaken.

      • Campylobacter
      • Bacterial pathogens
      • Salmonella
  3. Delineation of genetic relatedness and population structure of oral and enteric Campylobacter concisus strains by analysis of housekeeping genes [STANDARD]

    • Microbiology
    • Campylobacter concisus is an oral bacterium that has been shown to be associated with inflammatory bowel disease (IBD). In this study we examined clusters of oral C. concisus strains isolated from patients with IBD and healthy controls by analysing the six housekeeping genes that we previously described. In addition, we investigated the population structure of C. concisus strains.

      • Campylobacter
      • Bacterial pathogens
  4. Effectiveness of inactivation of foodborne pathogens during simulated home pan frying of steak, hamburger or meat strips

    • International Journal of Food Microbiology
    • Publication date: 3 August 2015
      , Volume 206
      Author(s): Evy Lahou , Xiang Wang , Elien De Boeck , Elien Verguldt , Annemie Geeraerd , Frank Devlieghere , Mieke Uyttendaele

      • Campylobacter
      • Escherichia coli O157:H7
      • Listeria monocytogenes
      • Bacterial pathogens
  5. A comparison of fluctuations of Campylobacter and Escherichia coli concentrations on broiler chicken carcasses during processing in two slaughterhouses

    • International Journal of Food Microbiology
    • Publication date: 16 July 2015
      , Volume 205
      Author(s): Ewa Pacholewicz , Arno Swart , Maarten Schipper , Betty G.M. Gortemaker , Jaap A. Wagenaar , Arie H. Havelaar , Len J.A. Lipman

      • Campylobacter
      • Bacterial pathogens
  6. First Case Report of Campylobacter volucris Bacteremia in an Immunocompromised Patient [Case Reports]

    • Journal of Clinical Microbiology
    • We report a case of Campylobacter volucris bacteremia in an immunocompromised patient with polycythemia vera and alcoholic liver cirrhosis. To our knowledge, this is the first case report in which this organism has been isolated from a human clinical specimen.

      • Campylobacter
      • Bacterial pathogens
  7. PerR controls oxidative stress defence and aerotolerance, but not motility-associated phenotypes of Campylobacter jejuni [STANDARD]

    • Microbiology
    • The foodborne bacterial pathogen Campylobacter jejuni is an obligate microaerophile, which is exposed to atmospheric oxygen during transmission through the food chain. Survival under aerobic conditions requires the concerted control of oxidative stress systems, which in C. jejuni are intimately connected with iron metabolism via the PerR and Fur regulatory proteins. Here we have characterised the roles of C.

      • Bacterial pathogens
      • Campylobacter
  8. Prevalence of Campylobacter spp. in Retail Chicken, Turkey, Pork, and Beef Meat in Poland between 2009 and 2013

    • Journal of Food Protection
    • Korsak, Dorota et al. The purpose of the present study was to determine the prevalence of thermophilic Campylobacter in poultry, pork, and beef meat at the retail level and to identify the main categories of meat representing the most significant reservoirs of Campylobacter. A monitoring study was conducted throughout Poland from 2009 to 2013. A total of 1,700 fresh meat samples were collected from supermarkets, large retail outlets, and smaller stores.

      • Campylobacter
      • Bacterial pathogens
  9. Gene Loss and Lineage-Specific Restriction-Modification Systems Associated with Niche Differentiation in the Campylobacter jejuni Sequence Type 403 Clonal Complex [Evolutionary and Genomic Microbiology]

    • Applied and Environmental Microbiology
    • Campylobacter jejuni is a highly diverse species of bacteria commonly associated with infectious intestinal disease of humans and zoonotic carriage in poultry, cattle, pigs, and other animals. The species contains a large number of distinct clonal complexes that vary from host generalist lineages commonly found in poultry, livestock, and human disease cases to host-adapted specialized lineages primarily associated with livestock or poultry.

      • Campylobacter
      • Bacterial pathogens
  10. Genetic diversity and host associations in Campylobacter jejuni from human cases and broilers in 2000 and 2008.

    • Veterinary Microbiology
    • Publication date: Available online 4 May 2015

      Author(s): Petra Griekspoor , Eva Olsson Engvall , Britt Åkerlind , Björn Olsen , Jonas Waldenström

      • Campylobacter
      • Bacterial pathogens
  11. Campylobacter jejuni contamination of broiler carcasses: Population dynamics and genetic profiles at slaughterhouse level

    • Food Microbiology
    • Publication date: September 2015
      , Volume 50
      Author(s): Igor Gruntar , Majda Biasizzo , Darja Kušar , Mateja Pate , Matjaž Ocepek

      • Bacterial pathogens
      • Campylobacter
  12. Impact of Disinfectant Wipes on the Risk of Campylobacter jejuni Infection During Raw Chicken Preparation in Domestic Kitchens

    • Journal of Applied Microbiology
    • Aims
      In the present study, we conducted a quantitative microbial risk assessment forecasting the exposure to Campylobacter jejuni contaminated surfaces during preparation of chicken fillets and how using a disinfectant wipe intervention to clean a contaminated work area decreases the risk of infection following the preparation of raw chicken fillet in a domestic kitchen.

      • Bacterial pathogens
      • Campylobacter
  13. Microbial food safety: Potential of DNA extraction methods for use in diagnostic metagenomics

    • Journal of Microbiological Methods
    • Publication date: Available online 1 May 2015

      Author(s): Mathilde H. Josefsen , Sandra C. Andersen , Julia Christensen , Jeffrey Hoorfar

      • Bacterial pathogens
      • Campylobacter
  14. Taxonomic Identification of Ruminal Epithelial Bacterial Diversity during Rumen Development in Goats [Microbial Ecology]

    • Applied and Environmental Microbiology
    • Understanding of the colonization process of epithelial bacteria attached to the rumen tissue during rumen development is very limited. Ruminal epithelial bacterial colonization is of great significance for the relationship between the microbiota and the host and can influence the early development and health of the host.

      • Bacterial pathogens
      • Campylobacter
  15. Molecular Survey of Occurrence and Quantity of Legionella spp., Mycobacterium spp., Pseudomonas aeruginosa and Amoeba Hosts in Municipal Drinking Water Storage Tank Sediments

    • Journal of Applied Microbiology
    • Aim
      To examine the occurrence and quantity of potential pathogens and an indicator of microbial contamination in the sediments of municipal drinking water storage tanks (MDWSTs), given the absence of such data across the United States.

      • Bacterial pathogens
      • Giardia lamblia
      • Cryptosporidium parvum
      • Parasites
      • Campylobacter
  16. Multicenter Evaluation of the BD Max Enteric Bacterial Panel PCR Assay for Rapid Detection of Salmonella spp., Shigella spp., Campylobacter spp. (C. jejuni and C. coli), and Shiga Toxin 1 and 2 Genes [Bacteriology]

    • Journal of Clinical Microbiology
    • Diarrhea due to enteric bacterial pathogens causes significant morbidity and mortality in the United States and worldwide. However, bacterial pathogens may be infrequently identified. Currently, culture and enzyme immunoassays (EIAs) are the primary methods used by clinical laboratories to detect enteric bacterial pathogens.

      • Salmonella
      • Shigella
      • Bacterial pathogens
      • Campylobacter
  17. Effect of extending processing plant operating time on the microbiological quality and safety of broiler carcasses

    • Food Control
    • Publication date: October 2015
      , Volume 56
      Author(s): Anthony Pavic , Julian M. Cox , Jeremy W. Chenu

      • Bacterial pathogens
      • Campylobacter
  18. Effect of Oxygen Stress on Growth and Survival of Clostridium perfringens, Campylobacter jejuni, and Listeria monocytogenes under Different Storage Conditions

    • Journal of Food Protection
    • Al-Qadiri, Hamzah et al. This study investigated the growth and survival of three foodborne pathogens (Clostridium perfringens, Campylobacter jejuni, and Listeria monocytogenes) in beef (7% fat) and nutrient broth under different oxygen levels. Samples were tested under anoxic (<0.5%), microoxic (6 to 8%), and oxic (20%) conditions during storage at 7°C for 14 days and at 22°C for 5 days. Two initial inoculum concentrations were used (1 and 2 log CFU per g of beef or per ml of broth).

      • Campylobacter
      • Bacterial pathogens
  19. Cytochrome c biogenesis in Campylobacter jejuni requires cytochrome c6 (CccA; Cj1153) to maintain apocytochrome cysteine thiols in a reduced state for haem attachment

    • Molecular Microbiology
    • The microaerophilic food-borne pathogen Campylobacter jejuni uses complex cytochrome-rich respiratory chains for growth and host colonization. Cytochrome c biogenesis requires haem ligation to reduced apocytochrome cysteines, catalysed by the cytochrome c synthase, CcsBA. While ccsBA could not be deleted, we showed that the thiol reductase DsbD and the CcsX homologue Cj1207 are involved in, but not essential for, cytochromes c biogenesis.

      • Bacterial pathogens
      • Campylobacter
  20. The Antimicrobial Effect of Spice-Based Marinades against Campylobacter jejuni on Contaminated Fresh Broiler Wings

    • Journal of Food Science
    • The antimicrobial effect of spice-based marinades against Campylobacter jejuni on inoculated fresh broiler wings was investigatedExperiments were carried out with 1 strain of C. jejuni and 6 marinades. Four experimental marinades were composed for the study and contained spices (thyme, rosemary, basil, marjoram, and so on) and different combination of bioactive compounds.

      • Campylobacter
      • Bacterial pathogens
  21. First Case Report of Fatal Sepsis Due to Campylobacter upsaliensis [Case Reports]

    • Journal of Clinical Microbiology
    • We encountered a rare case of severe fatal infection in a 70-year-old woman due to Campylobacter upsaliensis, identified by PCR amplification and sequencing analysis of the 16S rRNA gene using DNA extracted from the isolates. To our knowledge, fatal sepsis due to this organism has never been described to date.

      • Campylobacter
      • Bacterial pathogens
  22. Campylobacter concisus Pseudo-Outbreak Caused by Improved Culture Conditions [Bacteriology]

    • Journal of Clinical Microbiology
    • An unusual increase in the number of Campylobacter concisus isolates found in stool cultures provoked an outbreak investigation at Bern University Hospital. No epidemiological links were found between the cases, and the Campylobacter isolates were clonally unrelated. A change in culture conditions to a hydrogen-rich atmosphere enhancing growth of C. concisus was deemed responsible for this pseudo-outbreak.

      • Campylobacter
      • Bacterial pathogens
  23. Campylobacter virulence and survival factors

    • Food Microbiology
    • Publication date: June 2015
      , Volume 48
      Author(s): Declan J. Bolton

      • Bacterial pathogens
      • Campylobacter
  24. Mapping the carriage of flaA-restriction fragment length polymorphism Campylobacter genotypes on poultry carcasses through the processing chain and comparison to clinical isolates

    • Food Microbiology
    • Publication date: June 2015
      , Volume 48
      Author(s): Lesley L. Duffy , Patrick J. Blackall , Rowland N. Cobbold , Narelle Fegan

      • Bacterial pathogens
      • Campylobacter
  25. Effect of Human Isolated Probiotic Bacteria on Preventing Campylobacter jejuni Colonization of Poultry

    • Foodborne Pathogens and Disease
    • Foodborne Pathogens and Disease , Vol. 0, No. 0.

      • Bacterial pathogens
      • Campylobacter