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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 301 - 325 of 1677

  1. Probe-based Loop-Mediated Isothermal Amplification Assay for Multi-target Quantitative Detection of Three Foodborne Pathogens in Seafood

    • Food Analytical Methods
    • Foodborne pathogens pose serious risks to human health and food safety. More than one pathogen exists in seafood. It is difficult for conventional culture methods to detect some foodborne pathogens simultaneously. Probe-based loop-mediated isothermal amplification is a feasible tool for achieving multi-objective detection of bacterial pathogens in a short time.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
      • Vibrio
  2. Chitinolytic enzymes contribute to the pathogenicity of Aliivibrio salmonicida LFI1238 in the invasive phase of cold-water vibriosis

    • BMC Microbiology
    • Background Aliivibrio salmonicida is the causative agent of cold-water vibriosis in salmonids (Oncorhynchus mykiss and Salmo salar L.) and gadidae (Gadus morhua L.). Virulence-associated factors that are essential for the full spectrum of A. salmonicida pathogenicity are largely unknown.

      • Bacterial pathogens
      • Vibrio
  3. The production and influence of anti-Vibrio parahaemolytics IgY against experimental infection of V. parahaemolyticus in cultured Fenneropenaeus indicus

    • Fish & Shellfish Immunology
    • The increasing number of antibiotic-resistant bacteria emphasizes the need to find alternatives to complement antibiotics. Immunotherapy may also be used as a complementary treatment against pathogens that are difficult to treat with traditional antibiotics.

      • Bacterial pathogens
      • Vibrio
  4. Dietary of Lactobacillus paracasei and Bifidobacterium longum improve nonspecific immune responses, growth performance, and resistance against Vibrio parahaemolyticus in Penaeus vannamei

    • Fish & Shellfish Immunology
    • This study investigated the effects of two probiotics, namely Lactobacillus paracasei and Bifidobacterium longum, as feed additives on growth performance, nonspecific immunity, immune-related gene expression, and disease resistance against Vibrio parahaemolyticus in Penaeus vannamei. The experimental diets were prepared using L. paracasei and B.

      • Bacterial pathogens
      • Vibrio
  5. Highly efficient biosynthesis of spermidine from L-homoserine and putrescine using an engineered Escherichia coli with NADPH self-sufficient system

    • Applied Microbiology and Biotechnology
    • Spermidine is an important polyamine that can be used for the synthesis of various bioactive compounds in the food and pharmaceutical fields. In this study, a novel efficient whole-cell biocatalytic method with an NADPH self-sufficient cycle for spermidine biosynthesis was designed and constructed by co-expressing homoserine dehydrogenase (HSD), carboxyspermidine dehydrogenase (CASDH), and carboxyspermidine decarboxylase (CASDC).

      • Bacterial pathogens
      • Vibrio
  6. The effect of off-bottom versus on-bottom oyster culture on total and pathogenic Vibrio spp. abundances in oyster tissue, water and sediment samples

    • International Journal of Food Microbiology
    • Varying culture methods are commonly used for eastern oysterCrassostrea virginica, aquaculture in the Northeast United States. Vibrio vulnificus and V.

      • Bacterial pathogens
      • Vibrio
  7. Vibrio tetraodonis subsp. pristinus subsp. nov., isolated from the coral Acropora cytherea at Palmyra Atoll, and creation and emended description of Vibrio tetraodonis subsp. tetraodonis subsp. nov

    • Antonie van Leeuwenhoek
    • Strain OCN044T was isolated from the homogenised tissue and mucus of an apparently healthy Acropora cytherea coral fragment collected from the western reef terrace of Palmyra Atoll in the Northern Line Islands and was taxonomically evaluated with a polyphasic approach. The morphological and chemotaxonomic properties are consistent with characteristics of the genus Vibrio: Gram-stain-negative rods, oxidase- and catalase-positive, and motile by means of a polar flagellum.

      • Bacterial pathogens
      • Vibrio
  8. Detection of trh+ Vibrio parahaemolyticus in seafood by lac dye coloration‐based label‐free lateral flow immunoassay strip

    • Journal of Fish Diseases
    • Journal of Fish Diseases, EarlyView. Vibrio parahaemolyticus (V. parahaemolyticus) is an important foodborne pathogen known to cause severe enteric disease. Thus, timely detection of V. parahaemolyticus in seafood is crucial to prevent food poisoning and reduce economic losses.

      • Bacterial pathogens
      • Vibrio
  9. Characterization and epidemiological analysis of Vibrio parahaemolyticus isolated from different marine products in East China

    • International Journal of Food Microbiology
    • Vibrio parahaemolyticus is a major foodborne pathogen with a wide distribution in the world that causes economic and public health problems. Here, we isolated 152 V. parahaemolyticus strains from shellfish, shrimp, crab, and snails from 5 provinces in East China, and analyzed the genetic diversity, population structure, and virulence profiles of these isolates. Our results showed that the 152 V.

      • Bacterial pathogens
      • Vibrio
  10. Effect of different stainless steel surfaces on the formation and control of Vibrio parahaemolyticus biofilm

    • LWT
    • The attachment, biofilm formation and control of biofilm formed by Vibrio parahaemolyticus (VP) ATCC 17802 on four stainless steel (SS) coupons which are different in type or finishing, 316L, 304, 430 with 2B finish and 304 with BA finish, were studied. SS coupons were subjected to surface roughness measurement using Atomic Force Microscope and Scanning Electron Microscope.

      • Bacterial pathogens
      • Vibrio
  11. Genomic Analysis Reveals Adaptation of Vibrio campbellii to the Hadal Ocean

    • Applied and Environmental Microbiology
    • Applied and Environmental Microbiology, Ahead of Print. The genus Vibrio is characterized by high metabolic flexibility and genome plasticity and is widely distributed in the ocean from euphotic layers to deep-sea environments.

      • Bacterial pathogens
      • Vibrio
  12. Vibrio salinus sp. nov., a marine nitrogen-fixing bacterium isolated from the lagoon sediment of an islet inside an atoll in the western Pacific Ocean

    • Antonie van Leeuwenhoek
    • A marine, facultatively anaerobic, nitrogen-fixing bacterium, designated strain DNF-1T, was isolated from the lagoon sediment of Dongsha Island, Taiwan. Cells grown in broth cultures were Gram-negative rods that were motile by means of monotrichous flagella. Cells grown on plate medium produced prosthecae and vesicle-like structures. NaCl was required and optimal growth occurred at about 2–3% NaCl, 25–30 °C and pH 7–8.

      • Bacterial pathogens
      • Vibrio
  13. Abnormal bile acid metabolism is an important feature of gut microbiota and fecal metabolites in patients with slow transit constipation

    • Frontiers in Cellular and Infection Microbiology
    • Destructions in the intestinal ecosystem are implicated with changes in slow transit constipation (STC), which is a kind of intractable constipation characterized by colonic motility disorder. In order to deepen the understanding of the structure of the STC gut microbiota and the relationship between the gut microbiota and fecal metabolites, we first used 16S rRNA amplicon sequencing to evaluate the gut microbiota in 30 STC patients and 30 healthy subjects.

      • Bacterial pathogens
      • Vibrio
  14. Draft-genome analysis provides insights into the virulence properties and genome plasticity of Vibrio fluvialis organisms isolated from shrimp farms and Turag river in Bangladesh

    • Archives of Microbiology
    • Vibrio fluvialis is an opportunistic waterborne and seafood-borne enteric pathogen capable of causing severe diarrhea leading to death. This pathogen is endemic to Bangladesh, a country which is a major producer of cultured shrimp and wild-caught prawns. In this study, we carried out whole-genome sequencing of three V.

      • Bacterial pathogens
      • Vibrio
  15. Chitin degradation and its effect on natural transformation: a systematic genetic study in Vibrio parahaemolyticus

    • Canadian Journal of Microbiology
    • The degradation of polymeric chitin by chitinase liberates soluble N-acetyl glucosamine oligosaccharides (GlcNAcn≥2), a source of nutrition that can also induce a state of natural genetic competence in Vibrio parahaemolyticus. This analysis revealed that among seven predicted chitinases, the synergistic action of VPA0055 (ChiA2), VP0619 (ChiB), and VPA0832 (Cdx) were essential for the robust growth and high transformation frequency on chitin.

      • Bacterial pathogens
      • Vibrio
  16. Prevalence, genomic characterization, and risk assessment of human pathogenic Vibrio species in seafood

    • Pathogenic Vibrio spp. are largely responsible for human diseases caused through consumption of contaminated seafood. The aim of this study was to determine the prevalence, population densities, species diversity and molecular characteristics of pathogenic Vibrio in various seafood commodities and its associated health risks. Samples of finfish and shellfish (oysters and sea urchins) were collected from different regions and analyzed for Vibrio using the Most Probable Number (MPN) technique.

      • Bacterial pathogens
      • Vibrio
  17. Impacts of Mercury Exposure Levels and Sources on the Demethylation of Methylmercury Through Human Gut Microbiota

    • Bulletin of Environmental Contamination and Toxicology
    • This study aims to investigate methylmercury (MeHg) demethylation processes in human gut. Here, we determined the compositions and MeHg demethylation rates of gut microbiota in residents from different Hg exposure levels (Wanshan (WS) town and Yangtou (YT) town) and different Hg exposure sources (Zhuchang (ZC) town and YT town) regions. MeHg and inorganic Hg exposure levels in residents of WS town were significantly higher than those of YT and ZC town.

      • Bacterial pathogens
      • Vibrio
  18. Response mechanism of Vibrio parahaemolyticus at high pressure revealed by transcriptomic analysis

    • Applied Microbiology and Biotechnology
    • Vibrio parahaemolyticus is a common pathogen in aquatic products, such as shellfishes. Laboratory-based simulated studies demonstrated that V. parahaemolyticus can tolerate high hydrostatic pressure (HHP) up to 20 MPa. However, the molecular mechanisms of high-pressure adaptation remain unclear. Herein, we analyzed the physiological changes and transcriptomic responses of V.

      • Bacterial pathogens
      • Vibrio
  19. Conversion of the free Cellvibrio japonicus xyloglucan degradation system to the cellulosomal mode

    • Applied Microbiology and Biotechnology
    • Cellulosomes are multi-enzyme complexes produced by specialised micro-organisms. The spatial proximity of synergistically acting enzymes incorporated in these naturally occurring complexes supports the efficient hydrolysis of lignocellulosic biomass. Several functional designer cellulosomes, incorporating naturally non-cellulosomal cellulases, have been constructed and can be used for cellulose saccharification.

      • Bacterial pathogens
      • Vibrio
  20. Prevalence and Distribution of Potentially Human Pathogenic Vibrio spp. on German North and Baltic Sea Coasts

    • Frontiers in Cellular and Infection Microbiology
    • Global ocean warming results in an increase of infectious diseases including an elevated emergence of Vibrio spp. in Northern Europe. The European Centre for Disease Prevention and Control reported annual periods of high to very high risks of infection with Vibrio spp. during summer months along the North Sea and Baltic Sea coasts. Based on those facts, the risk of Vibrio infections associated with recreational bathing in European coastal waters increases.

      • Bacterial pathogens
      • Vibrio
  21. Metagenomic insights to understand the role of polluted river Yamuna in shaping the gut microbial communities of two invasive fish species

    • Archives of Microbiology
    • The gastrointestinal microbial community plays a crucial role in host health, immunity, protection, development and provides nutrients to the host. The rising human-induced pollution and heavy metal contamination in all aquatic systems globally has led us to explore the gut microbial diversity of two exotic invasive fish Cyprinus carpio (Linnaeus, 1858) and Oreochromis niloticus (Linnaeus,1857) from river Yamuna, India.

      • Bacterial pathogens
      • Shigella
      • Vibrio
  22. Microbiological Contaminants in Drinking Water: Current Status and Challenges

    • Water, Air, & Soil Pollution
    • Water is a vital resource to every living thing on the earth. Once the water is contaminated (physically, chemically, biologically, or radiologically), it brought negative impacts to the living thing. This paper provides a brief review of the characterization of biological pollutants in drinking water and their effects on human health.

      • Bacterial pathogens
      • Salmonella
      • Vibrio
      • Parasites
      • Cyclospora cayetanensis
      • Giardia lamblia
      • Viruses
      • Hepatitis
  23. Molecular characterization of Vibrio cholerae O1 El Tor strains in Malaysia revealed genetically diverse variant lineages

    • Transboundary and Emerging Diseases
    • Transboundary and Emerging Diseases, Volume 69, Issue 4, Page e693-e703, July 2022. Vibrio cholerae O1 El Tor variants have been the major causative agents of cholera worldwide since their emergence in the 2000s. Cholera remains endemic in some regions in Malaysia. Therefore, we aimed to investigate the genetic characteristics of the V.

      • Bacterial pathogens
      • Vibrio
  24. The Gut Microbiota Determines the High-Altitude Adaptability of Tibetan Wild Asses (Equus kiang) in Qinghai-Tibet Plateau

    • Frontiers in Microbiology
    • It was acknowledged long ago that microorganisms have played critical roles in animal evolution. Tibetan wild asses (TWA, Equus kiang) are the only wild perissodactyls on the Qinghai-Tibet Plateau (QTP) and the first national protected animals; however, knowledge about the relationships between their gut microbiota and the host's adaptability remains poorly understood.

      • Bacterial pathogens
      • Vibrio
  25. Epidemiological and microbiological investigation of a large increase in vibriosis, northern Europe, 2018

    • Eurosurveillance
    • Background Vibriosis cases in Northern European countries and countries bordering the Baltic Sea increased during heatwaves in 2014 and 2018. Aim We describe the epidemiology of vibriosis and the genetic diversity of spp.

      • Bacterial pathogens
      • Vibrio