An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 551 - 575 of 2089

  1. Recovery of Infectious Human Norovirus GII.4 Sydney From Fomites via Replication in Human Intestinal Enteroids

    • Frontiers in Cellular and Infection Microbiology
    • Contamination of fomites by human norovirus (HuNoV) can initiate and prolong outbreaks. Fomite swabbing is necessary to predict HuNoV exposure and target interventions. Historically, swab recovered HuNoV has been measured by molecular methods that detect viral RNA but not infectious HuNoV. The recent development of HuNoV cultivation in human intestinal enteroids (HIEs) enables detection of infectious HuNoV.

      • Norovirus
      • Viruses
  2. Unusual high prevalence of antibodies to hepatitis E virus in South Brazil

    • FEMS Microbiology Letters
    • ABSTRACT Hepatitis E virus (HEV) is worldwide distributed and might cause acute or chronic hepatitis mainly in immunocompromised individuals. In previous studies we found a high prevalence of antibodies to HEV within blood donors in south Brazil and also within backyard-raised pigs.

      • Hepatitis
      • Viruses
  3. Kinetic Modeling of Slightly Acidic Electrolyzed Water Decay Characteristics in Fresh Cabbage Disinfection Against Human Norovirus

    • Frontiers in Microbiology
    • To consistently disinfect fresh vegetables efficiently, the decay of disinfectants such as chlorine, electrolyzed oxidizing water (EOW), ozonated water, and plasma-activated water during the disinfection maintenance stage needs to be understood. The aim of our study was to evaluate the changes in the inactivation kinetics of slightly acidic electrolyzed water (SAEW) against human norovirus (HuNoV), based on the cabbage-to-SAEW ratio.

      • Norovirus
      • Viruses
  4. Burden of Norovirus in the United States, as Estimated Based on Administrative Data: Updates for Medically Attended Illness and Mortality, 2001–2015

    • Clinical Infectious Diseases
    • Background Up-to-date estimates of the burden of norovirus, a leading cause of acute gastroenteritis (AGE) in the United States, are needed to assess the potential value of norovirus vaccines in development. We aimed to estimate the rates, annual counts, and healthcare charges of norovirus-associated ambulatory clinic encounters, emergency department (ED) visits, hospitalizations, and deaths in the United States.

      • Norovirus
      • Viruses
  5. Preliminary Quantitative Risk Assessment of Norovirus in Shellfish in the Yellow Sea and Bohai Sea of China

    • Foodborne Pathogens and Disease
    • Norovirus (NoV) is a main foodborne pathogen of acute gastroenteritis in the world. A preliminary quantitative risk assessment (QRA) was conducted to evaluate the health risk caused by this virus in shellfish in the Yellow Sea and Bohai Sea of China. The QRA framework was established from the process of shellfish at retail through cooking at home to consumer consumption.

      • Norovirus
      • Viruses
  6. Optimizing Human Intestinal Enteroids for Environmental Monitoring of Human Norovirus

    • Food and Environmental Virology
    • Human noroviruses (HuNoV) are the leading cause of gastrointestinal illness and environmental monitoring is crucial to prevent HuNoV outbreaks. The recent development of a HuNoV cell culture assay in human intestinal enteroids (HIEs) has enabled detection of infectious HuNoV. However, this complex approach requires adaptation of HIEs to facilitate HuNoV replication from environmental matrixes.

      • Norovirus
      • Viruses
  7. Virological Characterization of Roof-Harvested Rainwater of Densely Urbanized Low-Income Region

    • Food and Environmental Virology
    • Roof-harvested rainwater (RHRW) is considered relatively clean water, even though the possible presence of pathogens in the water may pose human health risks. In this study, we investigated the occurrence of enteric viruses in the first flush (10 mm) of RHRW from a densely populated and low-income urbanized region of Rio de Janeiro. One hundred samples (5 L) were collected from 10 rainfall events between April 2015 and March 2017.

      • Viruses
      • Norovirus
  8. Continuous detection of norovirus and astrovirus in wastewater in a coastal city of China in 2014–2016

    • Letters in Applied Microbiology
    • Letters in Applied Microbiology, Accepted Article. Norovirus (NoV) and human astrovirus (HAstV) are important causative agents of acute gastroenteritis in children and adults. They comprised of multiple genotypes and attention should be paid to genotype changes or emergence of new genetic variants. To study the prevalence and diversity of NoV GI, GII and HAstV circulating in eastern China, we conducted a three-year environmental surveillance in a coastal city of Yantai.

      • Norovirus
      • Viruses
  9. Prevalence of GII.4 Sydney Norovirus Strains and Associated Factors of Acute Gastroenteritis in Children: 2019/2020 Season in Guangzhou, China

    • Food and Environmental Virology
    • Norovirus, the leading cause of non-bacterial acute gastroenteritis (AGE) worldwide, is constantly mutating. Continuous monitoring of the evolution of epidemic genotypes and emergence of novel genotypes is, therefore, necessary. This study determined the prevalence and clinical characteristics of norovirus strains in AGE in Guangzhou, China in 2019/2020 season.

      • Norovirus
      • Viruses
  10. Current state-of-the-art diagnostics for Norovirus detection: Model approaches for point-of-care analysis

    • Trends in Food Science & Technology
    • Author(s): Maja A. Zaczek-Moczydlowska, Azadeh Beizaei, Michael Dillion, Katrina Campbell

      • Norovirus
      • Viruses
  11. The Safety, Immunogenicity, and Immunopersistence of Hepatitis A Vaccine in HBs-Ag-Positive Participants: A Retrospective Study

    • Frontiers in Cellular and Infection Microbiology
    • Objectives

      To compare the safety, immunogenicity, and immune persistence of hepatitis A (HA) vaccines between HBs-Ag-positive and -negative participants.

      Method

      • Hepatitis
      • Viruses
  12. A viroporin-like 2B protein of Duck Hepatitis A Virus 1that induces incomplete autophagy in DEF cells

    • Poultry Science
    • Author(s): Zezheng Liu, Qian Ye, Anchun. Cheng, Xuming. Ou, Sai Mao, Di Sun, Shaqiu. Zhang, Xinxin. Zhao, Qiao Yang, Ying Wu, Juan Huang, Qun Gao, Bin Tian, Mingshu Wang

      • Hepatitis
      • Viruses
  13. Optimal Threshold of Controlled Attenuation Parameter for Detection of HIV-Associated NAFLD With Magnetic Resonance Imaging as the Reference Standard

    • Clinical Infectious Diseases
    • Background Controlled attenuation parameter (CAP) is an ultrasound-based point-of-care method to quantify liver fat; however, the optimal threshold for CAP to detect pathologic liver fat among persons living with human immunodeficiency virus (HIV; PLWH) is unknown.

      • Hepatitis
      • Viruses
  14. Vaccination Status of Alaska Native Persons With Hepatitis A Virus Infection—Alaska, 1996–2018

    • Clinical Infectious Diseases
    • Following increases in reported cases of hepatitis A, we assessed the impact of hepatitis A vaccine in Alaska Native persons. During 1996–2018, only 6 cases of hepatitis A were identified, all in unvaccinated adults. Populations can be protected against hepatitis A by achieving sufficient vaccination coverage over time.

      • Hepatitis
      • Viruses
  15. Advanced Oxidation Processes for Water and Wastewater Viral Disinfection. A Systematic Review

    • Food and Environmental Virology
    • Water and wastewater virological quality is a significant public health issue. Viral agents include emerging and re-emerging pathogens characterized by extremely small size, and high environmental stability.

      • Norovirus
      • Viruses
  16. Surveillance to Prevent the Spread of Norovirus Outbreak from Asymptomatic Food Handlers during the PyeongChang 2018 Olympics

    • Journal of Food Protection
    • The human noroviruses are major causes of nonbacterial gastroenteritis, and are transmitted by both food and water, as well as via a person-to-person route. Asymptomatic norovirus infection of food handlers may play a role in transmission. The outbreak of noroviruses infections has been recognized in PyeongChang Winter Olympics, starting with security staffs from February 3, 2018.

      • Norovirus
      • Viruses
  17. Pathogenicity of H9N2 low pathogenic avian influenza viruses of different lineages isolated from live bird markets tested in three animal models: SPF chickens, Korean native chickens, and ducks

    • Poultry Science
    • Author(s): Soo-Jeong Kye, Min-Ji Park, Na-Young Kim, Yu-Na Lee, Gyeong-Beom Heo, Yoon-Ki Baek, Jae-In Shin, Myoung-Heon Lee, Youn-Jeong Lee

      • Viruses
  18. Primary Chicken and Duck Endothelial Cells Display a Differential Response to Infection with Highly Pathogenic Avian Influenza Virus

    • Genes
    • Highly pathogenic avian influenza viruses (HPAIVs) in gallinaceous poultry are associated with viral infection of the endothelium, the induction of a ‘cytokine storm, and severe disease. In contrast, in Pekin ducks, HPAIVs are rarely endothelial tropic, and a cytokine storm is not observed. To date, understanding these species-dependent differences in pathogenesis has been hampered by the absence of a pure culture of duck and chicken endothelial cells.

      • Viruses
  19. Detection of Hepatitis A Virus in Strawberries Implicated in an Outbreak in the USA in 1997

    • Food and Environmental Virology
    • Hepatitis A virus (HAV) was detected in frozen strawberries which had been implicated in a large outbreak of hepatitis A in 1997. The sample was analysed after over 20 years of storage, following a standard method not available at the time of the outbreak. This is the first study in which the HAV associated with the 1997 outbreak of foodborne hepatitis has finally been detected.

      • Hepatitis
      • Viruses
  20. Changes of avian influenza virus subtypes before and after vaccination in live poultry in Nanchang, China from 2016 to 2019

    • Microbes and Infection
    • Author(s): Wentao Song, Jin Guo, Xiansheng Ni, Jingwen Wu, Wen Xia, Fenglan He, Xi Wang, Guoyin Fan, Kun Zhou, Yuhang Wu, Shengen Chen, Haiying Chen

      • Viruses
  21. Consumer Risk Perception and Trusted Sources of Food Safety Information During the COVID-19 Pandemic

    • Food Control
    • Author(s): Merlyn S. Thomas, Yaohua Feng

      • Viruses
      • COVID-19
  22. Prevalence of Toxoplasma gondii, Hepatitis E Virus and Salmonella antibodies in meat juice samples from pigs at slaughter in Switzerland

    • Journal of Food Protection
    • Toxoplasma gondii , hepatitis E virus (HEV) and Salmonella are zoonotic foodborne pathogens that may be transmitted to humans through the consumption of raw or undercooked pork.  The aim of this study was to determine the seroprevalence of anti- Toxoplasma gondii , anti-HEV and anti- Salmonella antibodies from healthy pigs at slaughter in Switzerland.

      • Salmonella
      • Hepatitis
      • Toxoplasma gondii
      • Bacterial pathogens
      • Parasites
      • Viruses
  23. Double mutations in the H9N2 avian influenza virus PB2 gene act cooperatively to increase viral host adaptation and replication for human infections

    • Microbiology
    • Avian H9N2 influenza viruses in East Asia are genetically diversified and multiple genotypes (A-W) have been established in poultry. Genotype S strains are currently the most prevalent strains, have caused many human infections and pose a public health threat. In this study, human adaptation mutations in the PB2 polymerase in genotype S strains were identified by database screening.

      • Viruses
  24. Characterization of a novel group I F-specific RNA bacteriophage isolated from human stool

    • Archives of Microbiology
    • A novel F-specific RNA bacteriophage (FRNAPH) YM1, affiliating to genogroup I (GI) of Levivirus, is isolated for the first time from human stool samples using double-layer agar plates with the Escherichia coli ATCC700891 as the host. The complete genomic sequence of YM1 is 3551 nt in length, obtained through next-generation sequencing, and contains four genes encoding for maturation protein, coat protein, lysis protein, and RNA-dependent RNA polymerase (RdRp).

      • Norovirus
      • Bacterial pathogens
      • Viruses
  25. Comprehensive Metabolomic Analysis Reveals Dynamic Metabolic Reprogramming in Hep3B Cells with Aflatoxin B1 Exposure

    • Toxins
    • Hepatitis B virus (HBV) infection and aflatoxin B1 (AFB1) exposure have been recognized as independent risk factors for the occurrence and development of hepatocellular carcinoma (HCC), but their combined impacts and the potential metabolic mechanisms remain poorly characterized. Here, a comprehensive non-targeted metabolomic study was performed following AFB1 exposed to Hep3B cells at two different doses: 16 μM and 32 μM.

      • Hepatitis
      • Aflatoxins
      • Natural toxins
      • Viruses