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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 138

  1. Antimicrobial resistance, virulence potential and genomic epidemiology of global genomes of the rare Salmonella enterica serovar Orion

    • Zoonoses and Public Health
    • Abstract Aims Our aim is to characterize through whole‐genome sequencing (WGS) the antimicrobial resistance (AMR) and heavy metal tolerance (HMT) genes content, plasmid presence, virulence potential and genomic diversity of the rare non‐typhoid Salmonella enterica serovar Orion (S. Orion) from 19 countries of the African, American, Eastern Mediterranean, European, Southeastern Asia and Western Pacific regions. Methods and Results Totally 324 S.

      • Bacterial pathogens
      • Salmonella
      • Chemical contaminants
      • Heavy Metals
  2. Listeria monocytogenes from food and food industry environments with reduced susceptibility to benzalkonium chloride, sodium hypochlorite, and peracetic acid

    • FEMS Microbiology Letters
    • The growing number of Listeria monocytogenes strains displaying increased tolerance to sanitizers widely applied in the food industry is becoming a problem. The aims of this study were to evaluate the susceptibility of L.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Chemical contaminants
      • Heavy Metals
  3. Rapid Screening and Comparison of Chimeric Lysins for Antibacterial Activity against Staphylococcus aureus Strains

    • Antibiotics
    • Chimeric lysins composed of various combinations of cell wall-lysing (enzymatic) and cell-wall-binding (CWB) domains of endolysins, autolysins, and bacteriocins have been developed as alternatives to or adjuvants of conventional antibiotics. The screening of multiple chimeric lysin candidates for activity via E. coli expression is not cost effective, and we previously reported on a simple cell-free expression system as an alternative.

      • Bacterial pathogens
      • Staphylococcus aureus
      • Chemical contaminants
      • Heavy Metals
  4. Prevalence of efflux pump and heavy metal tolerance encoding genes among Salmonella enterica serovar Infantis strains from diverse sources in Brazil

    • PLOS ONE
    • by Felipe Pinheiro Vilela, Dália dos Prazeres Rodrigues, Marc William Allard, Juliana Pfrimer Falcão Salmonella enterica subspecies enterica serovar Infantis (S. Infantis) is a non-typhoid, zoonotic and foodborne serovar with worldwide distribution, and often associated with increasing antimicrobial resistance. Efflux pumps are antimicrobial resistance mechanisms able to promote and increase resistance levels to multiple distinct drug classes.

      • Bacterial pathogens
      • Salmonella
      • Chemical contaminants
      • Heavy Metals
  5. The population structure and genetic diversity of Listeria monocytogenes ST9 strains based on genomic analysis

    • Frontiers in Microbiology
    • Listeria monocytogenes is a ubiquitous foodborne pathogen causing both invasive and non-invasive listeriosis. Sequence type (ST) 9 strains is common in food and food processing environments. In this study, the whole-genome sequences (WGS) of 207 ST9 isolates from different sources, geographical locations (14 countries), and isolated years were analyzed.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Chemical contaminants
      • Heavy Metals
  6. Structures, biosynthesis, and bioactivities of prodiginine natural products

    • Applied Microbiology and Biotechnology
    • Prodiginines are a large family of microbial secondary metabolites with a core structure of tripyrrole rings. They exhibit not only diverse chemical structures but also rich biological activities, such as anti-cancer, anti-microbial, anti-algae, anti-parasitic, pesticides, and UV radiation resistance.

      • Bacterial pathogens
      • Vibrio
      • Chemical contaminants
      • Heavy Metals
  7. Antibacterial Activity of Squaric Amide Derivative SA2 against Methicillin-Resistant Staphylococcus aureus

    • Antibiotics
    • Methicillin-resistant Staphylococcus aureus (MRSA)-caused infection is difficult to treat because of its resistance to commonly used antibiotic, and poses a significant threat to public health. To develop new anti-bacterial agents to combat MRSA-induced infections, we synthesized novel squaric amide derivatives and evaluated their anti-bacterial activity by determining the minimum inhibitory concentration (MIC).

      • Bacterial pathogens
      • Staphylococcus aureus
      • Chemical contaminants
      • Heavy Metals
  8. Cytotoxicity and anti-biofilm activities of biogenic cadmium nanoparticles and cadmium nitrate: a preliminary study

    • World Journal of Microbiology and Biotechnology
    • Wild-type microorganisms have become tolerant to higher antibiotic and antimicrobial agent concentrations due to the global increase in antibiotic consumption. Green-synthesized nanoparticles (NPs) have been proposed as potential antimicrobial agents to overcome the problem. This research prepared cadmium nanoparticles (Cd NPs) using Artemisia persica extract.

      • Bacterial pathogens
      • Staphylococcus aureus
      • Chemical contaminants
      • Heavy Metals
  9. Sequestration and efflux largely account for cadmium and copper resistance in the deep sea Nitratiruptor sp. SB155‐2 (Phylum Campylobacterota)

    • Environmental Microbiology
    • Environmental Microbiology, Accepted Article. In deep-sea hydrothermal vent environments, metal-enriched fluids and sediments abound, making these habitats ideal to study metal resistance in prokaryotes.

      • Bacterial pathogens
      • Campylobacter
      • Chemical contaminants
      • Heavy Metals
  10. Indole pyruvate decarboxylase gene regulates the auxin synthesis pathway in rice by interacting with the indole-3-acetic acid–amido synthetase gene, promoting root hair development under cadmium stress

    • Frontiers in Plant Science
    • This research focused on cadmium (Cd), which negatively affects plant growth and auxin hemostasis. In plants, many processes are indirectly controlled through the expression of certain genes due to the secretion of bacterial auxin, as indole-3-acetic acid (IAA) acts as a reciprocal signaling molecule in plant–microbe interaction.

      • Bacterial pathogens
      • Bacillus cereus
      • Chemical contaminants
      • Heavy Metals
  11. Cadmium and copper mixture effects on immunological response and susceptibility to Vibrio harveyi in white shrimp Litopenaeus vannamei

    • Fish & Shellfish Immunology
    • Cadmium (Cd2+) and copper (Cu2+) are considered immunotoxic metals and their presence in combination in the aquatic environment may cause effects on shrimp species as Litopenaeus vannamei. Thus, this research evaluates the combined effects of Cd2+ and Cu2+ on shrimp inoculated with Vibrio harveyi bacteria. The experiments were performed at 96-hours of exposure to sublethal concentrations of both metals.

      • Bacterial pathogens
      • Vibrio
      • Chemical contaminants
      • Heavy Metals
  12. Improvement in Metal Immobilization with Biomineralization During Carbonate Precipitation by Poly-Lysine

    • Water, Air, & Soil Pollution
    • Microbially induced carbonate precipitation (MICP), a type of urease-based biomineralization, has been a well-researched technique in recent years for heavy metal immobilization; however, the efficiency of the process remains in question. Poly(amino acids) are known to enhance enzymatic activity.

      • Bacterial pathogens
      • Staphylococcus aureus
      • Chemical contaminants
      • Heavy Metals
  13. Development of 4-[4-(Anilinomethyl)-3-phenyl-pyrazol-1-yl] Benzoic Acid Derivatives as Potent Anti-Staphylococci and Anti-Enterococci Agents

    • Antibiotics
    • From a library of compounds, 11 hit antibacterial agents have been identified as potent anti-Gram-positive bacterial agents. These pyrazole derivatives are active against two groups of pathogens, staphylococci and enterococci, with minimum inhibitory concentration (MIC) values as low as 0.78 μg/mL. These potent compounds showed bactericidal action, and some were effective at inhibiting and eradicating Staphylococcus aureus and Enterococcus faecalis biofilms.

      • Bacterial pathogens
      • Staphylococcus aureus
      • Chemical contaminants
      • Heavy Metals
  14. Interlaboratory Evaluation of Enterococcus faecium NRRL B-2354 as a Salmonella Surrogate for Validating Thermal Treatment of Multiple Low-Moisture Foods

    • This multi-institutional study assessed the efficacy of Enterococcus faecium NRRL B-2354 as a non-pathogenic Salmonella surrogate for thermal processing of nonfat dry milk powder, peanut butter, almond meal, wheat flour, ground black pepper, and date paste. Each product was analyzed by two laboratories (five independent laboratories total), with the lead laboratory inoculating (E. faecium or a five-strain Salmonella enterica cocktail of S.

      • Bacterial pathogens
      • Salmonella
      • Chemical contaminants
      • Heavy Metals
  15. Two New Sulfate-Modified Dibenzopyrones With Anti-foodborne Bacteria Activity From Sponge-Derived Fungus Alternaria sp. SCSIOS02F49

    • Frontiers in Microbiology
    • At present, foodborne diseases (FBDs) caused by bacteria are gradually increasing every year, and the development of new antibiotics is an urgent necessity for human beings. To find novel antibacterial compounds, three sponge-derived fungal strains (SCSIOS02F40, F46, and F49) were investigated. As a result, Alternaria sp.

      • Bacterial pathogens
      • Staphylococcus aureus
      • Chemical contaminants
      • Heavy Metals
  16. Investigation of chetomin as a lead compound and its biosynthetic pathway

    • Applied Microbiology and Biotechnology
    • Chaetomium fungi produce a diversity of bioactive compounds. Chaetomium cochliodes SD-280 possesses 91 secondary metabolite gene clusters and exhibits strong antibacterial activity. One of the active compounds responsible for that activity, chetomin, has a minimum inhibitory concentration (MIC) for anti-methicillin-resistant Staphylococcus aureus (MRSA) of 0.05 μg/mL (vancomycin: 0.625 μg/mL).

      • Bacterial pathogens
      • Staphylococcus aureus
      • Chemical contaminants
      • Heavy Metals
  17. In vitro Sequestration of Molecular and Mass Spectra Characterized Metallophilic Cadmium Tolerant Bacteria for Sustainable Agriculture

    • Frontiers in Microbiology
    • Due to industrialization, the contamination of toxic metals in soils is currently one of the major concerns to scientists worldwide. The presence of high concentrations of heavy metals including cadmium in the environment is mainly attributed to human activities. Being a highly toxic metal, cadmium can enter plant cell transporters usually used for the uptake of essential cations, such as iron, calcium, and zinc.

      • Bacterial pathogens
      • Staphylococcus aureus
      • Chemical contaminants
      • Heavy Metals
  18. Effects of heavy metals on growth and biofilm-producing abilities of Salmonella enterica isolated from Tunisia

    • Archives of Microbiology
    • This study aims to test the toxicity of some metallic elements on Salmonella enterica strains and their power to grow and to develop a biofilm to overcome this environmental stress. From 50 selected strains of Salmonella, 70% belong to the Kentucky serotypes that is the most frequent one, followed by the other serotypes such as Amsterdam 6%, anatum 4%, derby 4% Enteritidis 4%, Zanzibar 4%, typhyrimium 2%, gallinaruim 2%, inbondaka 2% and Newport 2%.

      • Bacterial pathogens
      • Salmonella
      • Chemical contaminants
      • Heavy Metals
  19. Elucidating Therapeutic and Biological Potential of Berberis baluchistanica Ahrendt Bark, Leaf, and Root Extracts

    • Frontiers in Microbiology
    • Berberis baluchistanica Ahrendt is a medicinal plant known to have potential for the treatment of various diseases. In the present study, the ethanolic extracts of the bark, leaves, and roots of B. baluchistanica plant were evaluated for in vitro antimicrobial, anti-leishmanial, anticancer, and anti-inflammatory activities. The antibacterial and antifungal activities were determined by agar mix and agar well diffusion method.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
      • Chemical contaminants
      • Heavy Metals
  20. Water regime is important to determine cadmium toxicity on rice growth and rhizospheric nitrifier communities in contaminated paddy soils

    • Plant and Soil
    • Purpose It is unknown how the Cd-mediated changes in the rhizospheric nitrifier community affect plant growth under different water management practices.

      • Bacterial pathogens
      • Vibrio
      • Chemical contaminants
      • Heavy Metals
  21. Development of New Antimicrobial Oleanonic Acid Polyamine Conjugates

    • Antibiotics
    • A series of oleanolic acid derivatives holding oxo- or 3-N-polyamino-3-deoxy-substituents at C3 as well as carboxamide function at C17 with different long chain polyamines have been synthesized and evaluated for antimicrobial activities. Almost all series presented good to moderate activity against Gram-positive S. aureus, S. faecalis and B. cereus bacteria with minimum inhibitory concentration (MIC) values from 3.125 to 200 µg/mL.

      • Bacterial pathogens
      • Staphylococcus aureus
      • Chemical contaminants
      • Heavy Metals
  22. AzuR From the SmtB/ArsR Family of Transcriptional Repressors Regulates Metallothionein in Anabaena sp. Strain PCC 7120

    • Frontiers in Microbiology
    • Metallothioneins (MTs) are cysteine-rich, metal-sequestering cytosolic proteins that play a key role in maintaining metal homeostasis and detoxification. We had previously characterized NmtA, a MT from the heterocystous, nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120 and demonstrated its role in providing protection against cadmium toxicity.

      • Heavy Metals
      • Bacterial pathogens
      • Chemical contaminants
  23. Cultivatable bacterial community in water from Lai Nullah contaminated with household sewage and industrial waste is more diverse and populated compared with nonpolluted water

    • Canadian Journal of Soil Science
    • The effect of environmental pollutants on living organisms can be assessed by studying the changes in the indigenous microbial community. Therefore, in this study, cultivatable bacterial community in nonpolluted as well as household sewage and industrially polluted water of Lai Nullah flowing through Islamabad and Rawalpindi, Pakistan was analyzed.

      • Heavy Metals
      • Bacterial pathogens
      • Chemical contaminants
  24. Colistin Resistance in Monophasic Isolates of Salmonella enterica ST34 Collected From Meat-Derived Products in Spain, With or Without CMY-2 Co-production

    • Frontiers in Microbiology
    • Colistin is a last-resort antibiotic in fighting severe infections caused by multidrug resistant Gram negative pathogens in hospitals. Zoonotic bacteria acquire colistin resistance in animal reservoirs and mediate its spread along the food chain. This is the case of non-typhoid serovars of Salmonella enterica. Colistin-resistant S. enterica in foods represents a threat to human health. Here, we assessed the prevalence of colistin-resistance in food-borne isolates of S.

      • Bacterial pathogens
      • Chemical contaminants
      • Salmonella
      • Heavy Metals
  25. Identification of Evolutionary Trajectories Associated with Antimicrobial Resistance Using Microfluidics

    • ACS Infectious Diseases
    • In vitro experimental evolution of pathogens to antibiotics is commonly used for the identification of clinical biomarkers associated with antibiotic resistance. Microdroplet emulsions allow exquisite control of spatial structure, species complexity, and selection microenvironments for such studies. We investigated the use of monodisperse microdroplets in experimental evolution.

      • Heavy Metals
      • Bacterial pathogens
      • Chemical contaminants