An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 41602

  1. Innovation and adaptation: The rise of a fentanyl smoking culture in San Francisco

    • PLOS ONE
    • by Daniel Ciccarone, Nicole Holm, Jeff Ondocsin, Allison Schlosser, Jason Fessel, Amanda Cowan, Sarah G. Mars

      Background

      Illicitly manufactured fentanyls and stimulants are implicated in the escalating US mortality from drug overdose. San Francisco, California (SF) has seen declining fentanyl injection while smoking has increased. Beliefs and behaviors surrounding this development are not well understood.

      Methods

      • Chemical contaminants
      • Antibiotic residues
  2. Risk assessment predicts most of the salmonellosis risk in raw chicken parts is concentrated in those few products with high-levels of high-virulence serotypes of Salmonella

    • Journal of Food Protection
      • Bacterial pathogens
      • Salmonella
  3. The role of hydrogen-rich water in delaying the pulp breakdown of litchi fruit during postharvest storage

    • Food Chemistry
      • Produce Safety
      • Post Harvest
  4. Curing of a field strain of Salmonella enterica serovar Infantis isolated from poultry from its highly stable pESI like plasmid

    • Journal of Microbiological Methods
      • Bacterial pathogens
      • Salmonella
  5. Endophyte-mediated enhancement of salt resistance in Arachis hypogaea L. by regulation of osmotic stress and plant defense-related genes

    • Frontiers in Microbiology
    • IntroductionSoil salinization poses a significant environmental challenge affecting plant growth and agricultural sustainability. This study explores the potential of salt-tolerant endophytes to mitigate the adverse effects of soil salinization, emphasizing their impact on the development and resistance of Arachis hypogaea L. (peanuts).MethodsThe diversity of culturable plant endophytic bacteria associated with Miscanthus lutarioriparius was investigated.

      • Bacterial pathogens
      • Staphylococcus aureus
  6. Mitigating aflatoxin B1 in high-moisture sorghum silage: Aspergillus flavus growth and aflatoxin B1 prediction

    • Frontiers in Microbiology
    • Aspergillus flavus (A. flavus), a frequent contaminant in silage, is a significant producer of aflatoxins, notably the potent carcinogen aflatoxin B1. This contaminant poses a potential risk during the initial aerobic phase of ensiling. The present work studied the impact of temperature on A. flavus growth and aflatoxin B1 production in laboratory-scale sorghum silos during the initial aerobic phase. Growth curves of A.

      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  7. Effect of Cold Atmospheric Plasma Fusion 222 nm UV and PAHP on Cold Pasteurisation of Egg Surfaces

    • Food and Bioprocess Technology
    • This study used a combination of cold atmospheric plasma (CAP) and ultraviolet (UV) 222 nm with plasma-activated hydrogen peroxide (PAHP) pre-treatment to optimise the pasteurisation of fresh eggs and to investigate their freshness quality.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Staphylococcus aureus
  8. A comprehensive review on the heterotrophic production of bioactive compounds by microalgae

    • World Journal of Microbiology and Biotechnology
    • Bioactive compounds derived from microalgae have garnered considerable attention as valuable resources for drugs, functional foods, and cosmetics. Among these compounds, photosynthetic pigments and polyunsaturated fatty acids (PUFAs) have gained increasing interest due to their numerous beneficial properties, including anti-oxidant, anti-viral, anti-bacterial, anti-fungal, anti-inflammatory, and anti-tumor effects.

      • Natural toxins
      • Shellfish toxins
  9. Linalool Reduces Virulence and Tolerance to Adverse Conditions of Listeria monocytogenes

    • Antibiotics
    • Listeria monocytogenes, a foodborne pathogen causing listeriosis, poses substantial societal, economic, and public health challenges due to its resistance, persistence, and biofilm formation in the food industry. Exploring subinhibitory concentrations of compounds to target virulence inhibition and increase susceptibility to adverse conditions presents a promising strategy to mitigate its impact of L. monocytogenes and unveils new potential applications.

      • Bacterial pathogens
      • Listeria monocytogenes
  10. Evaluation of Selenoprotein Supplementation on Digestibility, Growth, and Health Performance of Pacific White Shrimp Litopenaeus vannamei

    • Aquaculture Nutrition
    • Selenoprotein is a feed additive that can overcome oxidative stress in intensive Pacific white shrimp (Litopenaeus vannamei) culture. This study evaluated the effects of selenoprotein supplementation at various doses on Pacific white shrimp’s digestibility, growth, and health performance.

      • Bacterial pathogens
      • Vibrio
  11. Partial Substitution of Fish Meal with Soy Protein Concentrate on Growth, Liver Health, Intestinal Morphology, and Microbiota in Juvenile Large Yellow Croaker (Larimichthys crocea)

    • Aquaculture Nutrition
    • The present study investigated the growth performance, feed utilization, intestinal morphology, and microbiota communities of juvenile large yellow croaker (Larimichthys crocea) fed diets containing different proportions of soy protein concentrate (SPC) (0, 15%, 30%, and 45%, namely FM, SPC15, SPC30, and SPC45) as a substitute for fish meal (FM) for 8 weeks.

      • Bacterial pathogens
      • Vibrio
  12. Pot Marigold (Calendula officinalis) Powder in Rainbow Trout (Oncorhynchus mykiss) Feed: Effects on Growth, Immunity, and Yersinia ruckeri Resistance

    • Aquaculture Nutrition
    • The current research investigated the effects of pot marigold (Calendula officinalis) powder on growth, biochemical parameters, digestive enzymes, serum and mucus immune responses, antioxidant defense, and resistance of rainbow trout (Oncorhynchus mykiss) against Yersinia ruckeri. Fish (No. 450, 15.06 ± 0.11 g; mean ± SE) were randomly distributed to five groups fed with a diet containing 0 (control group), 0.5%, 1%, 1.5%, and 2% of pot marigold powder (MP) for 60 days.

      • Bacterial pathogens
      • Yersinia
  13. Effect of Dietary Incorporation of Yellow Mealworm as a Partial Fishmeal Replacer on Growth, Metabolism, and Intestinal Histomorphology in Juvenile Meagre (Argyrosomus regius)

    • Aquaculture Nutrition
    • Efforts have been made to find alternatives to fish meal (FM), as the sustainability of aquaculture depends on it. Insect meal (IM) is a potential candidate to partially replace FM, being more sustainable and economically viable. In this experimental trial, three diets were tested with different yellow mealworm incorporation: a control diet with no IM, a diet with an inclusion of 10% IM (Ins10), and a diet with an incorporation of 20% IM (Ins20).

      • Bacterial pathogens
      • Vibrio
  14. Effect of Tea Polyphenols, α‐Lipoic Acid and Their Joint Use on the Antioxidant and Lipid Metabolism Performance of Hybrid Grouper (♀Epinephelus fuscoguttatus × ♂E. lanceolatu) Fed with High‐Lipid Diets

    • Aquaculture Nutrition
    • This study investigated tea polyphenols (TP), α‐lipoic acid (ALA) and their joint use on the antioxidant and lipid metabolic performance of hybrid grouper (♀Epinephelus fuscoguttatus × ♂E. lanceolatu) took food with high‐fat diets. Six high‐lipid diets with isonitrogen (50% of dry matter) and isolipid (17% of dry value) were designed, in which a total content of 1,000 mg/kg additives were added to each group except for the control group (FL).

      • Bacterial pathogens
      • Vibrio
  15. Effects of Dietary Mannan Oligosaccharides on Growth, Nonspecific Immunity and Tolerance to Salinity Stress and Streptococcus iniae Challenge in Golden Pompano, Trachinotus ovatus

    • Aquaculture Nutrition
    • The effects of dietary supplementation with mannan oligosaccharide (MOS) on growth performance, haematological parameters, abundance of intestinal Vibrio spp., immune response, and tolerance to low salinity stress and Streptococcus iniae challenge were evaluated in pompano (Trachinotus ovatus). Pompano (3.24 ± 0.45 g) were fed six diets including a basal diet as control, and the basal diets supplemented with 0.1%, 0.2%, 0.4%, 0.6%, or 0.8% MOSs for 8 weeks.

      • Bacterial pathogens
      • Vibrio
  16. Machine learning to predict the relationship between Vibrio spp. concentrations in seawater and oysters and prevalent environmental conditions

    • Food Research International
      • Bacterial pathogens
      • Vibrio
  17. Genetic liability of gut microbiota for idiopathic pulmonary fibrosis and lung function: a two-sample Mendelian randomization study

    • Frontiers in Cellular and Infection Microbiology
    • BackgroundThe microbiota-gut-lung axis has elucidated a potential association between gut microbiota and idiopathic pulmonary fibrosis (IPF). However, there is a paucity of population-level studies with providing robust evidence for establishing causality.

      • Bacterial pathogens
      • Vibrio
  18. Salmonella Typhimurium caused an unprecedentedly large foodborne outbreak in Finland in 2021

    • Zoonoses and Public Health
    • Abstract Aims Salmonella infections are significant causes of foodborne outbreaks in the European Union. This study investigates a sudden increase in gastroenteritis patients in the hospital district of Central Finland in June 2021. The primary aim was to study the outbreak's magnitude and source of the outbreak. Methods and Results Epidemiological, microbiological, environmental and traceback investigations were conducted.

      • Bacterial pathogens
      • Salmonella
  19. Emerging innovative pre‐ and post‐harvest management practices to mitigate patulin‐linked food safety risks in apple and its products

    • Journal of Food Safety
    • Pre‐ and post‐harvest management practices to mitigate patulin. Abstract Patulin, a toxic secondary metabolite produced by certain molds (Penicillium, Aspergillus, and Byssochlamys), poses a significant health risk when present in apple juice products above permissible levels. Its presence is a major concern for both consumers and regulatory bodies due to its potential carcinogenic and mutagenic effects.

      • Natural toxins
      • Mycotoxins
      • Produce Safety
      • Post Harvest
      • Pre Harvest
  20. Role of Culinary Indian Spices in the Regulation of TGF‐β Signaling Pathway in Inflammation‐Induced Liver Cancer

    • Molecular Nutrition & Food Research
    • Modulation of TGF‐β path way with culinary Indian spices against HCC. Scope Hepatocellular carcinoma (HCC) results from various etiologies, such as Hepatitis B and C, Alcoholic and Non‐alcoholic fatty liver disorders, fibrosis, and cirrhosis. About 80 to 90% of HCC cases possess cirrhosis, which is brought on by persistent liver inflammation.

      • Viruses
      • Hepatitis
  21. Incidence of fungal contamination in fresh ginseng samples and mycotoxigenic potential of representative fungal isolates

    • Journal of the Science of Food and Agriculture
    • Abstract BACKGROUND Fresh ginseng is typically accompanied by soil after harvest, leading to contamination with harmful fungi during storage and distribution. In this study, we investigated the incidence of fungal contamination in fresh ginseng (5–6 years old) purchased from 22 different stores in Geumsan, Korea. RESULTS The incidence of fungal contamination in the samples was 67.4–111.5%.

      • Natural toxins
      • Mycotoxins
  22. Infectious hepatitis E virus is associated with the mature sperm head

    • PLOS Pathogens
    • by Kush K. Yadav, Patricia A. Boley, Thamonpan Laocharoensuk, Saroj Khatiwada, Carolyn M. Lee, Menuka Bhandari, Lindsey Moore, Juliette Hanson, Scott P. Kenney

      • Viruses
      • Hepatitis
  23. Short versus long duration of ceftaroline combination therapy and outcomes in persistent or high-grade MRSA bacteremia: A retrospective single-center study

    • PLOS ONE
    • by M. Gabriela Cabanilla, Michael L. Bernauer, Liana M. Atallah, Matthew J. Briski, Jason Koury, Cecilia M. Thompson, Chelsea N. Rodriguez, Bernadette Jakeman, Thomas F. Byrd

      Background

      • Bacterial pathogens
      • Staphylococcus aureus
  24. Fusarium pseudograminearum biomass and toxin accumulation in wheat tissues with and without Fusarium crown rot symptoms

    • Frontiers in Plant Science
    • Fusarium crown rot (FCR) is an important and devastating disease of wheat (Triticum aestivum) caused by the fungus Fusarium pseudograminearum and related pathogens. Using two distinct susceptible cultivars, we investigated the isolation frequencies of F. pseudograminearum and quantified its biomass accumulation and the levels of the associated toxins deoxynivalenol (DON) and DON-3-glucoside (D3G) in inoculated field-grown wheat plants. We detected F.

      • Natural toxins
      • Mycotoxins
  25. Tobacco rattle virus-based virus-induced gene silencing (VIGS) as an aid for functional genomics in Saffron (Crocus sativus L.)

    • Physiology and Molecular Biology of Plants
    • Several limitations in genetic engineering interventions in saffron exist, hindering the development of genetically modified varieties and the widespread application of genetic engineering in this crop. Lack of genome sequence information, the complexity of genetic makeup, and lack of well-established genetic transformation protocols limit its in planta functional validation of genes that would eventually lead toward crop optimization.

      • Chemical contaminants
      • Heavy Metals