An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 42283

  1. Transmission of dominant strains of Campylobacter jejuni and Campylobacter coli between farms and retail stores in Ecuador: Genetic diversity and antimicrobial resistance

    • PLOS ONE
    • by Lorena Montero, José L. Medina-Santana, María Ishida, Brian Sauders, Gabriel Trueba, Christian Vinueza-Burgos

      • Bacterial pathogens
      • Campylobacter
  2. Molecular characterization and virulence potential of Staphylococcus aureus from raw milk artisanal cheeses

    • International Dairy Journal
      • Bacterial pathogens
      • Staphylococcus aureus
  3. Longitudinal survey of hepatitis E virus in extensively raised pigs in Spain

    • Veterinary Microbiology
      • Viruses
      • Hepatitis
  4. Innovative approaches to controlling Salmonella in the meat industry

    • Meat Science
      • Bacterial pathogens
      • Salmonella
  5. Lactiplantibacillus plantarum JM113 alleviates deoxynivalenol induced intestinal damage by microbial modulation in broiler chickens

    • Poultry Science
      • Natural toxins
      • Mycotoxins
  6. Effect of Temperature, Relative Humidity, and Incubation Time on the Mycotoxin Production by Fusarium spp. Responsible for Dry Rot in Potato Tubers

    • Toxins
    • Potato is the fourth most consumed crop in the world. More than half of the crop is stored for three to nine months at cold temperatures (3–10 °C) for the fresh and seed market. One of the main causes of fresh potato waste in the retail supply chain is the processing of fungal and bacterial rots during storage. Dry rot is a fungal disease that mainly affects the potato crop during storage and is responsible for 1% of tuber losses in the UK.

      • Natural toxins
      • Mycotoxins
  7. Application of Antioxidant‐ and Antimicrobial‐Rich Extracts From Hass Avocado Pulp in the Development of Chitosan/Gelatin‐Based Active Packaging Films for Raw Meat Preservation

    • Journal of Food Safety
    • ABSTRACT In the present study, the ethanolic extracts derived from Hass avocado pulp were observed to exhibit exceptional bioactive qualities and demonstrate bactericidal efficacy against a wide range of microorganisms, encompassing both gram‐positive and gram‐negative bacteria, as well as fungi. Therefore, this work aimed to develop a biodegradable active film by incorporating the Hass avocado extracts into chitosan/gelatin‐based film (HGCF) for the preservation of beef and pork.

      • Bacterial pathogens
      • Staphylococcus aureus
  8. Dietary supplementation of distiller's grains yeast cultures improves performance and immunity by altering the intestinal flora of broilers

    • Journal of the Science of Food and Agriculture
    • Abstract BACKGROUND Distiller's grains are a by‐product of liquor production with a higher yield than liquor. Developing and utilizing distiller's grains well could alleviate the problem of scarce feed resources. Our present experiment was conducted with 6000 yellow‐feathered broilers to study the effects of adding distiller's grains yeast cultures (DGYC) to the diet on growth performance and immunity of broilers.

      • Bacterial pathogens
      • Campylobacter
  9. Enrichment Reveals Extensive Integration of Hepatitis B Virus DNA in Hepatitis Delta Virus-Infected Patients

    • The Journal of Infectious Diseases
    • Background Hepatitis B virus (HBV) DNA may become integrated into the human genome of infected human hepatocytes. Expression of integrations can produce the surface antigen (HBsAg) that is required for synthesis of hepatitis D virus (HDV) particles and the abundant subviral particles in the blood of HBV- and HDV-infected subjects. Knowledge about the extent and variation of HBV integrations and impact on chronic HDV is still limited.

      • Viruses
      • Hepatitis
  10. Growing Awareness: Limited Testing and Screening Bias for Hepatitis Delta Virus in Utah 2000–2021

    • The Journal of Infectious Diseases
    • Background This study assessed the epidemiology of hepatitis delta virus (HDV) within the University of Utah UHealth health care system (2000–2021). Methods Analysis of HDV/HBV testing, diagnostic codes, liver enzymes, and comorbidities was performed. Results Among the 1962 HBV patients, only 22.2% underwent HDV testing, revealing an 8.3% positivity rate for HDV coinfections.

      • Viruses
      • Hepatitis
  11. Eradication of Staphylococcus aureus in Implant-Associated Osteomyelitis by an Injectable In Situ-Forming Depot Antibiotics Delivery System

    • The Journal of Infectious Diseases
    • Background Bone infections with Staphylococcus aureus are notoriously difficult to treat and have high recurrence rates. Local antibiotic delivery systems hold the potential to achieve high in situ antibiotic concentrations, which are otherwise challenging to achieve via systemic administration. Existing solutions have been shown to confer suboptimal drug release and distribution. Here we present and evaluate an injectable in situ-forming depot system termed CarboCell.

      • Bacterial pathogens
      • Staphylococcus aureus
  12. Hepatitis B Surface Antigen Loss: What Does Integration Have to Do With a Functional Hepatitis B Virus Cure?

    • The Journal of Infectious Diseases
    • Worldwide, approximately, 400 million people have chronic hepatitis B virus (HBV) infection (chronic hepatitis B [CHB]), a leading cause of liver-related death [1]. A highly effective vaccine has prevented millions of infections but belies the challenge to treat and cure those with CHB.

      • Viruses
      • Hepatitis
  13. Brevetoxin Aptamer Selection and Biolayer Interferometry Biosensor Application

    • Toxins
    • Brevetoxins (PbTxs) are very potent marine neurotoxins that can cause an illness clinically described as neurologic shellfish poisoning (NSP). These toxins are cyclic polyether in chemistry and have increased their geographical distribution in the past 2 decades. However, the ethical problems as well as technical difficulties associated with currently employed analysis methods for marine toxins have spurred the quest for suitable alternatives to be applied in a regulatory monitoring regime.

      • Natural toxins
      • Shellfish toxins
  14. Phenotypic and Genotypic Identification of Antimicrobial Resistance amongst the Campylobacter jejuni and Campylobacter coli Strains Isolated from Raw Milk of Animal Species

    • Journal of Food Quality
    • Campylobacter jejuni and Campylobacter coli portion as an important food‐borne pathogen owing to the consumption of raw milk of animal species is unmoving unidentified. This survey appraised both phenotypic and genotypic patterns of antimicrobial resistance amongst the C. jejuni and C. coli strains isolated from raw milk samples. Totally, 850 raw milk samples were examined for C. jejuni and C. coli. After culture, species identification was done using PCR.

      • Bacterial pathogens
      • Campylobacter
  15. Engineered food-derived hesperetin as heterojunction photosensitizer for inhibiting Staphylococcus aureus and degrading patulin, and its application in perishable strawberries

    • Food Chemistry
      • Bacterial pathogens
      • Staphylococcus aureus
      • Natural toxins
      • Mycotoxins
  16. Effect of Staphylococcus aureus colonization and immune defects on the pathogenesis of atopic dermatitis

    • Archives of Microbiology
    • Atopic dermatitis (AD) is a common and recurrent skin disease characterized by skin barrier dysfunction, inflammation and chronic pruritus, with wide heterogeneity in terms of age of onset, clinical course and persistence over the lifespan. Although the pathogenesis of the disease are unclear, epidermal barrier dysfunction, immune and microbial dysregulation, and environmental factors are known to be critical etiologies in AD pathology.

      • Bacterial pathogens
      • Staphylococcus aureus
  17. Toll-like Receptor Expression in Pelodiscus sinensis Reveals Differential Responses after Aeromonas hydrophila Infection

    • Genes
    • Toll-like receptor (TLR), as an important pattern recognition receptor, is a bridge between non-specific immunity and specific immunity, and plays a vital role in the disease resistance of aquatic animals. However, the function of TLR in Pelodiscus sinensis is still unclear. Methods and Results: The sequence characteristics and homology of three TLRs (PsTLR2, PsTLR3 and PsTLR5) were determined in this investigation.

      • Bacterial pathogens
      • Staphylococcus aureus
      • Vibrio
  18. Antimicrobial and Phylogenomic Characterization of Bacillus cereus Group Strains Isolated from Different Food Sources in Italy

    • Antibiotics
    • Background: Bacillus cereus is a widespread environmental Gram-positive bacterium which is especially common in soil and dust. It produces two types of toxins that cause vomiting and diarrhea. At present, foodborne outbreaks due to Bacillus cereus group bacteria (especially Bacillus cereus sensu stricto) are rising, representing a serious problem in the agri-food supply chain.

      • Bacterial pathogens
      • Bacillus cereus
  19. Classification of Pesticide Residues in Sorghum Based on Hyperspectral and Gradient Boosting Decision Trees

    • Journal of Food Safety
    • ABSTRACT To address the challenges posed by chemical methods for detecting pesticide residues in sorghum, such as complicated sample preparation and prolonged detection periods, this study presents a rapid and nondestructive detection approach based on hyperspectral imaging (HSI) technology. A group of sorghum without pesticide residues and three groups uniformly sprayed with pesticides were used in this study.

      • Chemical contaminants
      • Pesticide residues
  20. Research on microbial diversity and nutritional flavor formation of Xianju wheat paste

    • Journal of the Science of Food and Agriculture
    • Abstract BACKGROUND Xianju wheat paste, a traditional condiment in Hubei Province, China, possesses nutritional value and a distinctive taste profile. Nevertheless, there remains a dearth of comprehensive comprehension regarding the intricate interplay between the microbial population and its nutritional profile in Xianju wheat paste. RESULTS It was determined that Xianju wheat paste harbors predominant microbial genera such as Bacillus, Staphylococcus and Aspergillus.

      • Bacterial pathogens
      • Shigella
      • Staphylococcus aureus
  21. Isolation and antimicrobial susceptibility profile of Salmonella species from slaughtered cattle carcasses and abattoir personnel at Dessie, municipality Abattoir, Northeast Ethiopia

    • BMC Microbiology
    • Antibiotic-resistant Salmonella is one of the main public health concerns in the world. Isolation of Salmonella in abattoirs has been considered the core source of infection in the community from meat. Still, the...

      • Bacterial pathogens
      • Salmonella
  22. Effect of dielectric barrier discharge high voltage atmospheric cold plasma on Aspergillus flavus inactivation and aflatoxin B1 degradation on inoculated raw peanuts

    • Innovative Food Science & Emerging Technologies
      • Natural toxins
      • Aflatoxins
      • Mycotoxins
  23. Evaluation of methods for identifying poultry wing rinses with Salmonella concentrations greater than or equal to 10 CFU/mL

    • Journal of Food Protection
      • Bacterial pathogens
      • Salmonella
  24. Fast screening of Milk for Deoxynivalenol

    • Food Chemistry
      • Natural toxins
      • Mycotoxins
  25. Tumour stemness and poor clinical outcomes in haemochromatosis patients with hepatocellular carcinoma

    • Journal of Clinical Pathology
    • Aims

      Patients with haemochromatosis (HFE) are known to have an increased risk of developing hepatocellular carcinoma (HCC). Available data are conflicting on whether such patients have poorer prognosis, and there is lack of data regarding the biology of HFE-HCC. We compared the course of HFE-HCC with a matched non-HFE-HCC control group and examined tumour characteristics using immunohistochemistry.

      Methods

      • Viruses
      • Hepatitis