An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 3121

  1. Study on the correlation of supplementation with L-citrulline on the gastrointestinal flora and semen antifreeze performance of ram

    • Frontiers in Microbiology
    • IntroductionCryopreservation of semen can give full play to the reproductive advantages of male animals. However, in actual production, due to the poor frost resistance of sheep semen and the low conception rate, the promotion of sheep frozen semen is greatly hindered. Therefore, it is urgent to improve the frost resistance of semen to improve the quality of frozen semen.

      • Bacterial pathogens
      • Staphylococcus aureus
      • Vibrio
  2. Unveiling the gut bacteriome diversity and distribution in the national fish hilsa (Tenualosa ilisha) of Bangladesh

    • PLOS ONE
    • by A. Q. M. Robiul Kawser, M. Nazmul Hoque, M. Shaminur Rahman, Tahsin Islam Sakif, Tracey J. Coffey, Tofazzal Islam The field of fish microbiome research has rapidly been advancing, primarily focusing on farmed or laboratory fish species rather than natural or marine fish populations.

      • Bacterial pathogens
      • Shigella
      • Staphylococcus aureus
  3. Staphylococcus aureus isolated from traditional artisanal raw milk cheese from southern Brazil: diversity, virulence, and antimicrobial resistance profile

    • Journal of Food Protection
    • Staphylococcus aureus is one of the primary pathogenic agents found in cheeses produced with raw milk. Some strains of S. aureus are enterotoxigenic, possessing the ability to produce toxins responsible for staphylococcal food poisoning when present in contaminated foods. This study aimed to genotypically characterize, assess the antimicrobial resistance profile, and examine the enterotoxigenic potential of strains of S.

      • Bacterial pathogens
      • Staphylococcus aureus
  4. Genome-based surveillance reveals cross-transmission of MRSA ST59 between humans and retail livestock products in Hanzhong, China

    • Frontiers in Microbiology
    • Methicillin-resistant Staphylococcus aureus (MRSA) has been recognized in hospitals, community and livestock animals and the epidemiology of MRSA is undergoing a major evolution among humans and animals in the last decade. This study investigated the prevalence of MRSA isolates from ground pork, retail whole chicken, and patient samples in Hanzhong, China.

      • Bacterial pathogens
      • Staphylococcus aureus
  5. Red Jambo Flower (Syzygium malaccense L.) as a Potential Bioactive Compound to Obtain Edible Extract: Optimization of Extraction, Toxicity, Antioxidant, and Antimicrobial Potential

    • Food Analytical Methods
    • This paper aimed to demonstrate the production of edible extracts from red jambo flowers, cultivated in northeastern Brazil, and investigate their bioactive properties.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
  6. Resistome, Virulome, and Clonal Variation in Methicillin-Resistant Staphylococcus aureus (MRSA) in Healthy Swine Populations: A Cross-Sectional Study

    • Genes
    • This cross-sectional study investigates the methicillin-resistant Staphylococcus aureus (MRSA): its prevalence, antimicrobial resistance, and molecular characteristics in healthy swine populations in central Portugal. A total of 213 samples were collected from pigs on twelve farms, and MRSA prevalence was assessed using selective agar plates and confirmed via molecular methods.

      • Bacterial pathogens
      • Staphylococcus aureus
  7. Antimicrobial activity of rambutan peel colouring agent containing cardamom oil in shrimp paste and its potential mode of action

    • International Journal of Food Science & Technology
    • The study explores a colouring agent developed from rambutan peel powder stabilised with cardamom oil, imparting antimicrobial functionality. The cardamom vapour's mode of action is elucidated, showing efficacy against Staphylococcus aureus, common in foods like shrimp paste. Addressing colour instability, the agent extends shrimp paste shelf life, ensuring a stable red hue. Summary Rambutan peel (RP), an agricultural by‐product from rambutan trading, contains the red pigment anthocyanin.

      • Bacterial pathogens
      • Staphylococcus aureus
  8. Occurrence, antimicrobial susceptibility, and resistance genes of Staphylococcus aureus in milk and milk products in the Arsi highlands of Ethiopia

    • BMC Microbiology
    • In Ethiopia, milk production and handling practices often lack proper hygiene measures, leading to the potential contamination of milk and milk products with Staphylococcus aureus (S. aureus), including methicill...

      • Bacterial pathogens
      • Staphylococcus aureus
  9. Antibacterial Activity of Oregano (Origanum vulgare L.) Essential Oil Vapors against Microbial Contaminants of Food-Contact Surfaces

    • Antibiotics
    • The antimicrobial effect of eight essential oils’ vapors against pathogens and spoilage bacteria was assayed. Oreganum vulgare L. essential oil (OVO) showed a broad antibacterial effect, with Minimum Inhibitory Concentration (MIC) values ranging from 94 to 754 µg cm−3 air, depending on the bacterial species.

      • Bacterial pathogens
      • Staphylococcus aureus
  10. Catabolism of phenolics from grape peel and its effects on gut microbiota during in vitro colonic fermentation

    • Journal of the Science of Food and Agriculture
    • Abstract Background Grape peels, the main by‐products of wine processing, are rich in bioactive ingredients of phenolics, including proanthocyanidins, flavonoids and anthocyanins. Phenolics have the function of regulating intestinal microbiota and promoting intestinal health. From the perspective of the dietary nutrition of grape peel phenolics (GPP), this study was to investigate the influence of GPP on the composition and metabolism of human gut microbiota during in vitro fermentation.

      • Bacterial pathogens
      • Staphylococcus aureus
  11. Isolation and characterization of novel Staphylococcus aureus bacteriophage Hesat from dairy origin

    • Applied Microbiology and Biotechnology
    • A novel temperate phage, named Hesat, was isolated by the incubation of a dairy strain of Staphylococcus aureus belonging to spa-type t127 with either bovine or ovine milk.

      • Bacterial pathogens
      • Staphylococcus aureus
  12. Establishment of a real‐time fluorescence and visual colorimetric detection method for Staphylococcus aureus based on loop‐mediated isothermal amplification

    • Journal of Food Safety
    • A novel loop‐mediated isothermal amplification assay was established on the basis of screening and verification of detection targets for rapid detection of Staphylococcus aureus. After amplification, there are two distinct methodologies for result determination: one involves the analysis of fluorescence curves, while the other involves the observation of color changes.

      • Bacterial pathogens
      • Staphylococcus aureus
  13. Effect of food environment on the ability of microorganisms to form biofilms

    • Journal of Food Safety
    • This research study the effect of the food product, even present in trace in the bacteria's habitat, on the bacteria potential of biofilm formation. Understanding the conditions that favor or disadvantage the formation of biofilms could help in the development and implementation of new alternative strategies to combat food‐borne infections.

      • Bacterial pathogens
      • Staphylococcus aureus
  14. A Smartphone-Enabled Colorimetric Platform Based on Enzyme Cascade Amplification Strategy for Detection of Staphylococcus aureus in Milk

    • Journal of Dairy Science
    • Staphylococcus aureus (S. aureus) is a pathogenic bacterium-contaminating milk and dairy foods causing food poisoning and foodborne pathogens. In this work, a smartphone-enabled enzyme cascade-triggered colorimetric platform was constructed using cascade bio-nanozyme formed by immobilized glucose oxidase (GOx) on the Fe3O4@Ag for rapid detection of S. aureus.

      • Bacterial pathogens
      • Staphylococcus aureus
  15. Comprehensive whole genome analysis of Staphylococcus aureus isolates from dairy cows with subclinical mastitis

    • Frontiers in Microbiology
    • Staphylococcus species are the primary cause of mastitis in dairy cows across the world. Staphylococcus aureus has recently become a pathogen that is zoonotic and multidrug resistant. This study aimed to sequence whole genomes of 38 S. aureus isolates from 55 subclinical mastitis dairy cows of 7 small-scale farmers in the Free State Province, South Africa and document and their antimicrobial and virulence genes.

      • Bacterial pathogens
      • Staphylococcus aureus
  16. Sinapic acid attenuates biofilm formation and virulence factor production in methicillin resistant Staphylococcus aureus (MRSA) isolated from raw camel milk: An in vitro and in silico approach

    • International Dairy Journal
    • Camel milk is highly nutritious but contamination with biofilm forming methicillin resistant Staphylococcus aureus (MRSA) may pose a serious threat to human health and food safety. Therefore, sinapic acid (SA) was assessed for its in vitro antibiofilm and antivirulence potential against MRSA isolated from raw camel milk samples.

      • Bacterial pathogens
      • Staphylococcus aureus
  17. Enterotoxigenic Staphylococcus aureus in Brazilian artisanal cheeses: Occurrence, counts, phenotypic and genotypic profiles

    • Food Microbiology
    • The present study aimed to assess the occurrence and counts of Staphylococcus aureus in Brazilian artisanal cheeses (BAC) produced in five regions of Brazil: Coalho and Manteiga (Northeast region); Colonial and Serrano (South); Caipira (Central-West); Marajó (North); and Minas Artisanal cheeses, from Araxá, Campos das Vertentes, Cerrado, Serro and Canastra microregions (Southeast).

      • Bacterial pathogens
      • Staphylococcus aureus
  18. Regulation of the growth performance and the gastrointestinal microbiota community by the addition of defective pear fermentation to feed of small-tailed Han sheep

    • Frontiers in Microbiology
    • This study investigated the effects of defective pear fermentation (DPF) diets on growth performance and gastrointestinal microbial communities in 60 healthy male small-tailed Han sheep, aged 90 days. The sheep were randomly divided into four groups, each consisting of three replicates with five sheep per replicate. Initially, all groups received a basal diet for seven days during the adaptation stage.

      • Bacterial pathogens
      • Staphylococcus aureus
  19. Genomic insights from Lactiplantibacillus plantarum BRD3A isolated from Atingba, a traditional fermented rice-based beverage and analysis of its potential for probiotic and antimicrobial activity against Methicillin-resistant Staphylococcus aureus

    • Frontiers in Microbiology
    • Lactiplantibacillus plantarum BRD3A was isolated from Atingba, a traditional fermented rice-based beverage of Manipur. Its genomic sequence has 13 contigs and its genome size is 3,320,817 bp with a guanine–cytosine (GC) ratio of 44.6%. It comprises 3185 genes including 3112 coding sequences (CDSs), 73 RNAs (including 66 tRNAs and others), and one clustered regularly interspaced short palindromic repeat (CRISPR) array. A comparative and phylogenetic analysis with the Lp.

      • Bacterial pathogens
      • Staphylococcus aureus
  20. Peptidome Profiling of Bubalus bubalis Urine and Assessment of Its Antimicrobial Activity against Mastitis-Causing Pathogens

    • Antibiotics
    • Urinary proteins have been studied quite exhaustively in the past, however, the small sized peptides have remained neglected for a long time in dairy cattle. These peptides are the products of systemic protein turnover, which are excreted out of the body and hence can serve as an important biomarker for various pathophysiologies. These peptides in other species of bovine have been reported to possess several bioactive properties.

      • Bacterial pathogens
      • Staphylococcus aureus
  21. Improving the Composition and Bioactivity of Cocoa (Theobroma cacao L.) Bean Shell Extract by Choline Chloride-Lactic Acid Natural Deep Eutectic Solvent Extraction Assisted by Pulsed Electric Field Pre-Treatment

    • Plant Foods for Human Nutrition
    • An environmentally friendly method for the release of cocoa bean shell (CBS) extracts is proposed in this paper. This work aims to investigate the effect of pulsed electric field (PEF) pre-treatment on subsequent solid-liquid extraction (SLE) of metabolites with choline chloride-lactic acid natural deep eutectic solvent (NaDES) and bioactivity of cocoa bean shell (CBS) extract. Two different media for PEF application were evaluated: water and chlorine chloride-lactic acid.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
      • Staphylococcus aureus
  22. Exploring associations between the teat apex metagenome and Staphylococcus aureus intramammary infections in primiparous cows under organic directives

    • Applied and Environmental Microbiology
    • Applied and Environmental Microbiology, Ahead of Print. The primary objective of this study was to identify associations between the prepartum teat apex microbiome and the presence of Staphylococcus aureus intramammary infections (IMI) in primiparous cows during the first 5 weeks after calving.

      • Bacterial pathogens
      • Staphylococcus aureus
  23. Microbiological Quality and Safety of Fresh Rabbit Meat with Special Reference to Methicillin-Resistant S. aureus (MRSA) and ESBL-Producing E. coli

    • Antibiotics
    • The purpose of this investigation was to evaluate the microbial quality and safety of rabbit meat. A total of 49 rabbit meat samples were taken at the retail level. The mesophiles, staphylococci, Enterobacterales, and Pseudomonas spp. counts were 4.94 ± 1.08, 2.59 ± 0.70, 2.82 ± 0.67, and 3.23 ± 0.76 log CFU/g, respectively. Campylobacter spp.

      • Bacterial pathogens
      • Campylobacter
      • Listeria monocytogenes
      • Staphylococcus aureus
  24. Pharmacokinetics and pharmacodynamics of antibacterial peptide NZX in Staphylococcus aureus mastitis mouse model

    • Applied Microbiology and Biotechnology
    • Staphylococcus aureus is associated with dairy mastitis, which causes serious economic losses to dairy farming industry. Antibacterial peptide NZX showed good antibacterial activity against S. aureus. This study aimed to evaluate pharmacokinetics and pharmacodynamics of NZX against S. aureus-induced mouse mastitis. NZX exhibited potent in vitro antibacterial activity against the test S.

      • Bacterial pathogens
      • Staphylococcus aureus
  25. Preventing microbe colonization on avocado (Persea nubigena var. guatemalensis) through metabiotic treatment, a promising postharvest safety improvement

    • Frontiers in Microbiology
    • Introduction

      Lactic acid bacteria (LAB) produce various metabolites (i.e. metabiotics) with inhibitory capacity towards harmful foodborne pathogens.

      Methods

      • Bacterial pathogens
      • Staphylococcus aureus