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Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 49

  1. Assessment of the in-vitro probiotic efficacy and safety of Pediococcus pentosaceus L1 and Streptococcus thermophilus L3 isolated from Laban, a popular fermented milk product

    • Archives of Microbiology
    • Probiotics are beneficial microorganisms, mostly lactic acid bacteria (LAB), that offer health benefits to the host when consumed in adequate amounts. This study assessed the probiotic efficacy and safety of LAB strains isolated from Laban, a traditional fermented milk product.

      • Bacterial pathogens
      • Bacillus cereus
      • Salmonella
      • Staphylococcus aureus
      • Vibrio
  2. Antibiofilm mechanism of peppermint essential oil to avert biofilm developed by foodborne and food spoilage pathogens on food contact surfaces

    • Journal of Food Science
    • Abstract Establishing efficient methods to combat bacterial biofilms is a major concern. Natural compounds, such as essential oils derived from plants, are among the favored and recommended strategies for combatting bacteria and their biofilm. Therefore, we evaluated the antibiofilm properties of peppermint oil as well as the activities by which it kills bacteria generally and particularly their biofilms.

      • Bacterial pathogens
      • Enterohemorrhagic Escherichia coli
      • Escherichia coli O157:H7
      • Listeria monocytogenes
      • Salmonella
      • Vibrio
  3. Identification of the gut microbiota affecting Salmonella pullorum and their relationship with reproductive performance in hens

    • Frontiers in Microbiology
    • Introduction Pullorum disease is one of the common bacterial infectious diseases caused by Salmonella pullorum (S. pullorum), which can result in a decrease in the reproductive performance of laying hens, thus causing considerable economic losses. However, studies about the characteristics of intestinal microbiota with pullorum and their potential association with reproductive performance in hens are still limited. This study was to identify the gut microbiota associated with S.

      • Bacterial pathogens
      • Salmonella
      • Vibrio
  4. Microbiological quality, antibiotic resistant bacteria and relevant resistance genes in ready-to-eat Pacific oysters (Magallana gigas)

    • FEMS Microbiology Letters
    • Oysters are a highly valued seafood but can endanger public health, if they are eaten raw or barely cooked. We evaluated the microbiological quality of Pacific oysters (Magallana gigas) by international standard methods in four groups (each with four to five animals) acquired from supermarkets and directly from a farm producer. Most of the groups presented satisfactory microbiological quality.

      • Bacterial pathogens
      • Salmonella
      • Shigella
      • Staphylococcus aureus
      • Vibrio
  5. Prevalence of Antibiotic-Resistant Seafood-Borne Pathogens in Retail Seafood Sold in Malaysia: A Systematic Review and Meta-Analysis

    • Antibiotics
    • The objective of this study was to examine the frequency and extent of antibiotic-resistant pathogens in seafood sold in Malaysia, using a systematic review and meta-analysis approach to analyze primary research studies. Four bibliographic databases were systematically searched for primary studies on occurrence. Meta-analysis using a random-effect model was used to understand the prevalence of antibiotic-resistant bacteria in retail seafood sold in Malaysia.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
      • Vibrio
  6. Antibiotic resistance profiles on pathogenic bacteria in the Brazilian environments

    • Archives of Microbiology
    • The present study aimed to elaborate a review of multidrug-resistant (MDR) bacteria in soil, food, aquatic environments, cattle, poultry, and swine farms in Brazil. Initially, the literature database for published papers from 2012 to 2023 was Scientific Electronic Library Online (SciELO), U.S. National Library of Medicine (PubMed), and Google Scholar, through the descriptors: antimicrobial resistance, resistance profile, multidrug resistance, environmental bacteria, and pathogenic bacteria.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
      • Shigella
      • Staphylococcus aureus
      • Vibrio
  7. Microbial Contamination and Antibiotic Resistance in Marketed Food in Bangladesh: Current Situation and Possible Improvements

    • Antibiotics
    • Antimicrobial resistance (AMR) is a public health problem worldwide. Bangladesh, like its neighboring countries, faces many public health challenges, including access to safe food, inadequate food surveillance, as well as increasing AMR. This study investigated bacterial contamination and the AMR profile of pathogens in marketed food in Bangladesh and explored barriers to reducing AMR in the country.

      • Bacterial pathogens
      • Salmonella
      • Vibrio
  8. Molecular Epidemiology of Antimicrobial Resistance and Virulence Profiles of Escherichia coli, Salmonella spp., and Vibrio spp. Isolated from Coastal Seawater for Aquaculture

    • Antibiotics
    • The occurrence of waterborne antimicrobial-resistant (AMR) bacteria in areas of high-density oyster cultivation is an ongoing environmental and public health threat given the popularity of shellfish consumption, water-related human recreation throughout coastal Thailand, and the geographical expansion of Thailand’s shellfish industry.

      • Bacterial pathogens
      • Salmonella
      • Vibrio
  9. Estimating the burden of foodborne gastroenteritis due to nontyphoidal Salmonella enterica, Shigella and Vibrio parahaemolyticus in China

    • PLOS ONE
    • by Yan-Jun Li, Yun-Fan Yang, Yi-Jing Zhou, Rong-Hua Zhang, Cheng-Wei Liu, Hong Liu, Xiu-Gui Li, Wen Chen, Yan Chen, Yong-Ning Wu To estimate the incidence of foodborne gastroenteritis caused by nontyphoidal Salmonella enterica, Shigella, and Vibrio parahaemolyticus in China, population surveys and sentinel hospital surveillance were implemented in six provinces from July 2010 to July 2011, and a multiplier calculation model for the burden of disease was constru

      • Bacterial pathogens
      • Salmonella
      • Shigella
      • Vibrio
  10. Systematic Surveillance and Meta-Analysis of Antimicrobial Resistance and Food Sources from China and the USA

    • Antibiotics
    • Since the discovery of antibiotics in the 20th century, they have been used to fight against infections. The overuse of antibiotics in the wider environment has resulted in the emergence of multidrug-resistant bacteria. In developing countries such as China and developed countries such as the USA, there is evidence of the high pervasiveness of antibiotic-resistant infections.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Staphylococcus aureus
      • Vibrio
  11. Probe-based Loop-Mediated Isothermal Amplification Assay for Multi-target Quantitative Detection of Three Foodborne Pathogens in Seafood

    • Food Analytical Methods
    • Foodborne pathogens pose serious risks to human health and food safety. More than one pathogen exists in seafood. It is difficult for conventional culture methods to detect some foodborne pathogens simultaneously. Probe-based loop-mediated isothermal amplification is a feasible tool for achieving multi-objective detection of bacterial pathogens in a short time.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
      • Vibrio
  12. Microbiological Contaminants in Drinking Water: Current Status and Challenges

    • Water, Air, & Soil Pollution
    • Water is a vital resource to every living thing on the earth. Once the water is contaminated (physically, chemically, biologically, or radiologically), it brought negative impacts to the living thing. This paper provides a brief review of the characterization of biological pollutants in drinking water and their effects on human health.

      • Bacterial pathogens
      • Salmonella
      • Vibrio
      • Parasites
      • Cyclospora cayetanensis
      • Giardia lamblia
      • Viruses
      • Hepatitis
  13. Prevalence of Antimicrobial Resistance in Select Bacteria From Retail Seafood—United States, 2019

    • Frontiers in Microbiology
    • In 2019, the United States National Antimicrobial Resistance Monitoring System (NARMS) surveyed raw salmon, shrimp, and tilapia from retail grocery outlets in eight states to assess the prevalence of bacterial contamination and antimicrobial resistance (AMR) in the isolates.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
      • Vibrio
  14. Long Chain Fatty Acids and Virulence Repression in Intestinal Bacterial Pathogens

    • Frontiers in Cellular and Infection Microbiology
    • When bacterial pathogens enter the gut, they encounter a complex milieu of signaling molecules and metabolites produced by host and microbial cells or derived from external sources such as the diet. This metabolomic landscape varies throughout the gut, thus establishing a biogeographical gradient of signals that may be sensed by pathogens and resident bacteria alike.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
      • Vibrio
  15. Detection of Zoonotic Bacteria and Paragonimus kellicotti in Red Swamp Crayfish (Procambarous clarkii) and The Assessment of Traditional Crayfish Boils

    • Studies on red swamp crayfish ( Procambarus clarkii ) outside of the United States confirm a variety of zoonotic pathogens, but in the $200 million dollar US commercial crayfish industry it is unknown if these same pathogens occur, demonstrating a need to evaluate this consumer commodity. The study objectives were to evaluate specific zoonotic pathogens present on red swamp crayfish ( P.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
      • Vibrio
  16. Potential Probiotic Strains From Milk and Water Kefir Grains in Singapore—Use for Defense Against Enteric Bacterial Pathogens

    • Frontiers in Microbiology
    • Kefir grains consist of complex symbiotic mixtures of bacteria and yeasts, and are reported to impart numerous health-boosting properties to milk and water kefir beverages. The objective of this work was to investigate the microbial communities in kefir grains, and explore the possibility of deriving useful probiotic strains from them.

      • Bacterial pathogens
      • Salmonella
      • Staphylococcus aureus
      • Vibrio
  17. AB5 Enterotoxin-Mediated Pathogenesis: Perspectives Gleaned from Shiga Toxins

    • Toxins
    • Foodborne diseases affect an estimated 600 million people worldwide annually, with the majority of these illnesses caused by Norovirus, Vibrio, Listeria, Campylobacter, Salmonella, and Escherichia coli. To elicit infections in humans, bacterial pathogens express a combination of virulence factors and toxins.

      • Bacterial pathogens
      • Campylobacter
      • Escherichia coli O157:H7
      • Salmonella
      • Vibrio
      • Viruses
      • Norovirus
  18. Prevalence and Antimicrobial Resistance of Escherichia coli, Salmonella and Vibrio Derived from Farm-Raised Red Hybrid Tilapia (Oreochromis spp.) and Asian Sea Bass (Lates calcarifer, Bloch 1970) on the West Coast of Peninsular Malaysia

    • Antibiotics
    • Antibiotics are widely used in intensive fish farming, which in turn increases the emergence of antimicrobial-resistant (AMR) bacteria in the aquatic environment. The current study investigates the prevalence and determines the antimicrobial susceptibility of E. coli, Salmonella, and Vibrio in farmed fishes on the west coast of Peninsular Malaysia. Over a period of 12 months, 32 aquaculture farms from the Malaysian states of Selangor, Negeri Sembilan, Melaka, and Perak were sampled. Both E.

      • Bacterial pathogens
      • Salmonella
      • Vibrio
  19. Assessment of Microbiological Quality of Fresh Vegetables and Oysters Produced in Buenos Aires Province, Argentina

    • Food and Environmental Virology
    • Fresh vegetables and shellfish are prone to microbial contamination through irrigation or breeding with sewage-polluted waters, as well as by infected food handlers. In this work, we studied the presence of human and bovine polyomaviruses and human norovirus in fresh lettuces, strawberries and oysters produced in Buenos Aires province, Argentina. In oysters, we also investigated F-specific RNA bacteriophages, indicator Escherichia coli (E.

      • Bacterial pathogens
      • Salmonella
      • Vibrio
      • Viruses
      • Norovirus
  20. Assessment of Microbiological Quality of Fresh Vegetables and Oysters Produced in Buenos Aires Province, Argentina

    • Food and Environmental Virology
    • Fresh vegetables and shellfish are prone to microbial contamination through irrigation or breeding with sewage-polluted waters, as well as by infected food handlers. In this work, we studied the presence of human and bovine polyomaviruses and human norovirus in fresh lettuces, strawberries and oysters produced in Buenos Aires province, Argentina. In oysters, we also investigated F-specific RNA bacteriophages, indicator Escherichia coli (E.

      • Norovirus
      • Salmonella
      • Vibrio
      • Bacterial pathogens
      • Viruses
  21. Microbiological Quality and Levels of Heavy Metals in Slipper Oyster (Crassostrea iredalei) Cultured in Major Growing Areas in Capiz Province, Western Visayas, Philippines: Compliance with International Shellfish Safety and Sanitation Standards

    • Journal of Food Protection
    • The increasing demand for slipper oyster ( Crassostrea iredalei ) has propelled farmers to expand oyster cultivation areas in the Philippines, chiefly for local consumption and feasibly for export overseas. Being filter feeders, oysters can accumulate pathogens from their surrounding waters, which can cause foodborne diseases once consumed. Monitoring oyster farming areas for microbiological quality and levels of heavy metals is therefore crucial.

      • Salmonella
      • Vibrio
      • Bacterial pathogens
  22. Integrative and Conjugative Element-Mediated Azithromycin Resistance in Multidrug-Resistant Salmonella enterica Serovar Albany

    • Antimicrobial Agents and Chemotherapy
    • We identified an erm42-carrying integrative and conjugative element, ICE_erm42, in 26.4% of multidrug-resistant Salmonella enterica serovar Albany isolates recovered from cases of human salmonellosis between 2014 and 2019 in Taiwan. ICE_erm42-carrying strains displayed high-level resistance to azithromycin, and the element could move into the phylogenetically distant species Vibrio cholerae via conjugation.

      • Salmonella
      • Vibrio
      • Bacterial pathogens
  23. Carbonic Anhydrases: New Perspectives on Protein Functional Role and Inhibition in Helicobacter pylori

    • Frontiers in Microbiology
    • Our understanding of the function of bacterial carbonic anhydrases (CAs, EC 4.2.1.1) has increased significantly in the last years. CAs are metalloenzymes able to modulate CO2, HCO3– and H+ concentration through their crucial role in catalysis of reversible CO2 hydration (CO2 + H2O ⇄ HCO3– + H+).

      • Salmonella
      • Vibrio
      • Bacterial pathogens
  24. The Structure, Composition, and Role of Periplasmic Stator Scaffolds in Polar Bacterial Flagellar Motors

    • Frontiers in Microbiology
    • In the bacterial flagellar motor, the cell-wall-anchored stator uses an electrochemical gradient across the cytoplasmic membrane to generate a turning force that is applied to the rotor connected to the flagellar filament. Existing theoretical concepts for the stator function are based on the assumption that it anchors around the rotor perimeter by binding to peptidoglycan (P).

      • Salmonella
      • Vibrio
      • Bacterial pathogens
  25. Microbiome Analyses Demonstrate Specific Communities Within Five Shark Species

    • Frontiers in Microbiology
    • Profiles of symbiotic microbial communities (“microbiomes”) can provide insight into the natural history and ecology of their hosts. Using high throughput DNA sequencing of the 16S rRNA V4 region, microbiomes of five shark species in South Florida (nurse, lemon, sandbar, Caribbean reef, and tiger) have been characterized for the first time. The microbiomes show species specific microbiome composition, distinct from surrounding seawater.

      • Bacterial pathogens
      • Salmonella
      • Vibrio