An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Research Publications (Food Safety)

This page tracks research articles published in national and international peer-reviewed journals. Recent articles are available ahead of print and searchable by Journal, Article Title, and Category. Research publications are tracked across six categories: Bacterial Pathogens, Chemical Contaminants, Natural Toxins, Parasites, Produce Safety, and Viruses. Articles produced by USDA Grant Funding Agencies (requires login) and FDA Grant Funding Agencies (requires login) are also tracked in Scopus.

Displaying 1 - 25 of 146

  1. Comprehensive analysis of predominant pathogenic bacteria and viruses in seafood products

    • Comprehensive Reviews in Food Science and Food Safety
    • Abstract Given the growing global demand for seafood, it is imperative to conduct a comprehensive study on the prevalence and persistence patterns of pathogenic bacteria and viruses associated with specific seafood varieties. This assessment thoroughly examines the safety of seafood products, considering the diverse processing methods employed in the industry.

      • Bacterial pathogens
      • Clostridium botulinum
      • Listeria monocytogenes
      • Salmonella
      • Vibrio
      • Viruses
      • Hepatitis
      • Norovirus
  2. The European Union One Health 2022 Zoonoses Report

    • EFSA Journal
    • Abstract This report by the European Food Safety Authority and the European Centre for Disease Prevention and Control presents the results of the zoonoses monitoring and surveillance activities carried out in 2022 in 27 Member States (MSs), the United Kingdom (Northern Ireland) and 11 non‐MSs. Key statistics on zoonoses and zoonotic agents in humans, food, animals and feed are provided and interpreted historically.

      • Bacterial pathogens
      • Campylobacter
      • Listeria monocytogenes
      • Salmonella
      • Viruses
      • Norovirus
  3. Sequential infection of human norovirus and Salmonella enterica resulted in higher mortality and ACOD1/IRG1 upregulation in zebrafish larvae

    • Microbes and Infection
    • Human norovirus (HNoVs) and Salmonella are both very important foodborne pathogens with mixed infection of HNoV and Salmonella reported clinically.

      • Bacterial pathogens
      • Salmonella
      • Viruses
      • Norovirus
  4. Comparative genomic analysis of Campylobacter hepaticus genomes associated with spotty liver disease, Georgia, United States

    • Frontiers in Microbiology
    • Campylobacter hepaticus has re-emerged as an important cause of disease in egg laying birds worldwide, resulting in morbidity, mortality, and significant losses in eggs for the breeding and table egg laying industries. Although birds may appear asymptomatic, the disease is characterized by spots on the liver of birds and histopathological analysis reveals multifocal fibrogranulocytic necrotizing hepatitis microscopically. The re-emergence of C.

      • Bacterial pathogens
      • Campylobacter
      • Viruses
      • Hepatitis
  5. Prioritization of vegetable-borne biological hazards in Argentina using a multicriteria decision analysis tool

    • Food Science and Technology International
    • Vegetables, especially those eaten raw, have been implicated in several foodborne disease outbreaks. Since multiple vegetable matrices and hazards are involved, risk managers have to prioritize those with the greatest impact on public health to design control strategies. In this study, a scientific-based risk ranking of foodborne pathogens transmitted by leafy green vegetables in Argentina was performed.

      • Bacterial pathogens
      • Campylobacter
      • Escherichia coli O157:H7
      • Salmonella
      • Shigella
      • Yersinia
      • Parasites
      • Cryptosporidium parvum
      • Giardia lamblia
      • Toxoplasma gondii
      • Viruses
      • Hepatitis
      • Norovirus
  6. Simulation of contamination and elimination of Escherichia coli, Listeria monocytogenes, and Murine norovirus 1 (MNV-1) from the washing process when handling of potatoes

    • International Journal of Food Microbiology
    • Root vegetables, which are in close contact with soil, are particularly vulnerable to soil contamination or decay as they can be contaminated from multiple sources, including primary production and processing. This study investigated effective washing conditions to reduce the microbial contamination of potatoes by using soaking and shaking in the washing process.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Viruses
      • Norovirus
  7. Recent trends and developments of PCR-based methods for the detection of food-borne Salmonella bacteria and Norovirus

    • Journal of Food Science and Technology
    • In recent years, rapid detection methods such as polymerase chain reaction (PCR) and quantitative real-time PCR (qPCR) have been continuously developed to improve the detection of food-borne pathogens in food samples. The recent developments of PCR and qPCR in the detection and identification of these food-borne pathogens are described and elaborated throughout this review.

      • Bacterial pathogens
      • Salmonella
      • Viruses
      • Norovirus
  8. Microbiological Contaminants in Drinking Water: Current Status and Challenges

    • Water, Air, & Soil Pollution
    • Water is a vital resource to every living thing on the earth. Once the water is contaminated (physically, chemically, biologically, or radiologically), it brought negative impacts to the living thing. This paper provides a brief review of the characterization of biological pollutants in drinking water and their effects on human health.

      • Bacterial pathogens
      • Salmonella
      • Vibrio
      • Parasites
      • Cyclospora cayetanensis
      • Giardia lamblia
      • Viruses
      • Hepatitis
  9. Enteric Illness Outbreaks Reported Through the National Outbreak Reporting System—United States, 2009–2019

    • Clinical Infectious Diseases
    • Background The National Outbreak Reporting System (NORS) captures data on foodborne, waterborne, and enteric illness outbreaks in the United States. This study describes enteric illness outbreaks reported during 11 years of surveillance. Methods We extracted finalized reports from NORS for outbreaks occurring during 2009–2019.

      • Bacterial pathogens
      • Campylobacter
      • Salmonella
      • Shigella
      • Viruses
      • Norovirus
  10. Temperature, Time, and Type, Oh My! Key Environmental Factors Impacting the Recovery of Salmonella Typhimurium, Listeria monocytogenes, and Tulane Virus from Surfaces

    • Environmental monitoring (EM) programs are designed to detect the presence of pathogens in food manufacturing environments with the goal of preventing microbial contamination of food. Nevertheless, limited knowledge exists regarding the influence of environmental conditions on microbial recovery during EM. This study utilizes a commercially-available polyurethane foam (PUF) EM tool to determine the influence of environmental factors on the recovery of foodborne pathogens.

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
      • Viruses
      • Norovirus
  11. A New Vaccination Method Based on Phage NgoΦ6 and Its Phagemid Derivatives

    • Frontiers in Microbiology
    • Phagemid particles based on the Neisseria gonorrhoeae filamentous phage NgoΦ6 were used as a vaccine delivery system. We demonstrate that the host proteins incorporated into/associated with these particles can be encoded by chromosomal genes of the host bacterium or from plasmids able to replicate as an autonomous entity in the phagemid host. Phagemid particles were prepared from three types of cells, namely, Salmonella enterica ser.

      • Bacterial pathogens
      • Salmonella
      • Viruses
      • Hepatitis
  12. Evaluation of water‐assisted UV‐C light and its additive effect with peracetic acid for the inactivation of Listeria monocytogenes, Salmonella enterica and murine norovirus on whole and fresh‐cut strawberries during shelf‐life

    • Journal of the Science of Food and Agriculture
    • Journal of the Science of Food and Agriculture, Accepted Article. Background The purpose of the present study was to examine the inactivation of Salmonella enterica (50 μL; 109 CFU/g), Listeria monocytogenes (50 μL; 109 CFU/g), and murine norovirus (MNV-1; 50 μL; 107 TCID50/mL) on whole and fresh-cut strawberries after 2-min disinfection treatments (water (H2O), chlorine 200 mg/L (NaClO), water-assisted UV-C (WUV), and th

      • Bacterial pathogens
      • Listeria monocytogenes
      • Salmonella
      • Viruses
      • Norovirus
  13. Anti-hepatitis C virus drug simeprevir: a promising antimicrobial agent against MRSA

    • Applied Microbiology and Biotechnology
    • Abstract Staphylococcus aureus is a major human pathogen, and the appearance of methicillin-resistant S. aureus (MRSA) renders S. aureus infections more challenging to treat. Therefore, new antimicrobial drugs are urgently needed to combat MRSA infections. Drug repurposing is an effective and feasible strategy.

      • Bacterial pathogens
      • Staphylococcus aureus
      • Viruses
      • Hepatitis
  14. Foodborne Outbreak Rates Associated with Restaurant Inspection Grading and Posting at the Point of Service: Evaluation Using National Foodborne Outbreak Surveillance Data

    • A previously conducted national survey of restaurant inspection programs associated the practice of disclosing inspection results to consumers at the restaurant point-of-service (POS) with fewer foodborne outbreaks. We used data from the national Foodborne Disease Outbreak Surveillance System (FDOSS) to assess the reproducibility of the survey results.

      • Bacterial pathogens
      • Salmonella
      • Viruses
      • Norovirus
  15. Evaluation of the Thermo Scientific SureTect Salmonella Species PCR Assay in a Broad Range of Foods and Select Environmental Surfaces: Pre-Collaborative and Collaborative Study: First Action 2021.02

    • Journal of AOAC INTERNATIONAL
    • Background The Thermo Scientific™ SureTect™ Salmonella species PCR Assay utilizes Solaris™ reagents for performing PCR for the rapid and specific detection of Salmonella species in a broad range of foods and select environmental surfaces. Objective The aims were to demonstrate the reproducibility of the Thermo Scientific SureTect Salmonella species PCR Assay in a collaborative study using a challenging matrix, cocoa powder, and to extend the scope of the method.

      • Bacterial pathogens
      • Salmonella
      • Viruses
      • COVID-19
  16. Surveillance and characteristics of food-borne outbreaks in the Netherlands, 2006 to 2019

    • Eurosurveillance
    • Background A wide variety of pathogens can cause disease in humans via consumption of contaminated food.

      • Bacterial pathogens
      • Bacillus cereus
      • Campylobacter
      • Salmonella
      • Viruses
      • Norovirus
  17. AB5 Enterotoxin-Mediated Pathogenesis: Perspectives Gleaned from Shiga Toxins

    • Toxins
    • Foodborne diseases affect an estimated 600 million people worldwide annually, with the majority of these illnesses caused by Norovirus, Vibrio, Listeria, Campylobacter, Salmonella, and Escherichia coli. To elicit infections in humans, bacterial pathogens express a combination of virulence factors and toxins.

      • Bacterial pathogens
      • Campylobacter
      • Escherichia coli O157:H7
      • Salmonella
      • Vibrio
      • Viruses
      • Norovirus
  18. Assessment of Microbiological Quality of Fresh Vegetables and Oysters Produced in Buenos Aires Province, Argentina

    • Food and Environmental Virology
    • Fresh vegetables and shellfish are prone to microbial contamination through irrigation or breeding with sewage-polluted waters, as well as by infected food handlers. In this work, we studied the presence of human and bovine polyomaviruses and human norovirus in fresh lettuces, strawberries and oysters produced in Buenos Aires province, Argentina. In oysters, we also investigated F-specific RNA bacteriophages, indicator Escherichia coli (E.

      • Bacterial pathogens
      • Salmonella
      • Vibrio
      • Viruses
      • Norovirus
  19. Sanitation and customer service strategies implemented during COVID-19 correlated with lower Listeria monocytogenes prevalence in retail delicatessens

    • Food Control
      • Bacterial pathogens
      • Listeria monocytogenes
      • Viruses
      • COVID-19
  20. Association of Common Zoonotic Pathogens With Concentrated Animal Feeding Operations

    • Frontiers in Microbiology
    • Animal farming has intensified significantly in recent decades, with the emergence of concentrated animal feeding operations (CAFOs) in industrialized nations. The congregation of susceptible animals in CAFOs can lead to heavy environmental contamination with pathogens, promoting the emergence of hyper-transmissible, and virulent pathogens.

      • Staphylococcus aureus
      • Hepatitis
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
      • Viruses
  21. Incidence, Etiology, and Severity of Acute Gastroenteritis Among Prospectively Enrolled Patients in 4 Veterans Affairs Hospitals and Outpatient Centers, 2016–2018

    • Clinical Infectious Diseases
    • Background Acute gastroenteritis (AGE) burden, etiology, and severity in adults is not well characterized. We implemented a multisite AGE surveillance platform in 4 Veterans Affairs Medical Centers (Atlanta, Georgia; Bronx, New York; Houston, Texas; and Los Angeles, California), collectively serving >320 000 patients annually.

      • Norovirus
      • Shigella
      • Bacterial pathogens
      • Viruses
  22. Multiplex PCR method for the detection of human norovirus, Salmonella spp., Shigella spp., and shiga toxin producing Escherichia coli in blackberry, coriander, lettuce and strawberry

    • Food Microbiology
    • Author(s): Omar Hernández Hernández, Ana L. Gutiérrez-Escolano, Cleo Cancio-Lonches, Montserrat H. Iturriaga, Juan Ramiro Pacheco-Aguilar, Rocío Morales-Rayas, Sofía M. Arvizu-Medrano A multiplex PCR method was developed for the simultaneous detection of murine norovirus (MNV-1) as a surrogate for human norovirus (HuNoV) GI and GII, Salmonella spp., Shigella spp., and Shiga toxin producing Escherichia coli (STEC) in fresh produce.

      • Bacterial pathogens
      • Salmonella
      • Shigella
      • Viruses
      • Norovirus
  23. Norovirus diarrhea is significantly associated with higher counts of fecal histo-blood group antigen expressing Enterobacter cloacae among black South African infants

    • Gut Microbes
    • The study tested the hypothesis that harboring high levels of histo-blood group antigen-expressing Enerobactero cloacae is a risk factor for norovirus diarrhea. The fecal E. cloacae abundance in diarrheic norovirus positive (DNP), non-diarrheic norovirus negative (NDNN), diarrhea norovirus negative (DNN), and non-diarrhea norovirus positive (NDNP) infants was determined by qPCR, and the risk of norovirus diarrhea was assessed by logistical regression.

      • Norovirus
      • Bacterial pathogens
      • Viruses
  24. Improved diagnosis of gastrointestinal infections using a semi-automated multiplex real-time PCR for detection of enteropathogens

    • Microbiology
    • The identification of enteropathogens is critical for the clinical management of patients with suspected gastrointestinal infection. The FLOW multiplex PCR system (FMPS) is a semi-automated platform (FLOW System, Roche) for multiplex real-time PCR analysis.

      • Campylobacter
      • Norovirus
      • Salmonella
      • Shigella
      • Giardia lamblia
      • Cryptosporidium parvum
      • Bacterial pathogens
      • Parasites
      • Viruses
  25. Assessment of Microbiological Quality of Fresh Vegetables and Oysters Produced in Buenos Aires Province, Argentina

    • Food and Environmental Virology
    • Fresh vegetables and shellfish are prone to microbial contamination through irrigation or breeding with sewage-polluted waters, as well as by infected food handlers. In this work, we studied the presence of human and bovine polyomaviruses and human norovirus in fresh lettuces, strawberries and oysters produced in Buenos Aires province, Argentina. In oysters, we also investigated F-specific RNA bacteriophages, indicator Escherichia coli (E.

      • Norovirus
      • Salmonella
      • Vibrio
      • Bacterial pathogens
      • Viruses